BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os09g0505800 Os09g0505800|AK102065
(496 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os09g0505800 Similar to Uridine kinase-like protein 871 0.0
Os08g0530000 Similar to Uridine kinase-like protein 750 0.0
Os11g0265000 Uridine kinase family protein 622 e-178
Os02g0273000 Similar to Uridine kinase-like protein 617 e-177
AK119843 609 e-174
Os05g0455700 Uracil phosphoribosyl transferase family protein 81 2e-15
Os02g0708200 Uridine kinase family protein 67 4e-11
>Os09g0505800 Similar to Uridine kinase-like protein
Length = 496
Score = 871 bits (2251), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/496 (87%), Positives = 436/496 (87%)
Query: 1 MPEKAVDDVMDSAVGAHFSGLRLEALRLXXXXXXXXXXXXXXXXXXXXHSXXXXXXXXXX 60
MPEKAVDDVMDSAVGAHFSGLRLEALRL HS
Sbjct: 1 MPEKAVDDVMDSAVGAHFSGLRLEALRLSSPSAPSSPSSAKAAAAAAAHSNGAVYANGVA 60
Query: 61 XXXXELVSPSALRQPFVIGVSGGTASGKTTVCDMIIQQLHDHRVVLVNQDSFYRGLTAEE 120
ELVSPSALRQPFVIGVSGGTASGKTTVCDMIIQQLHDHRVVLVNQDSFYRGLTAEE
Sbjct: 61 ADAAELVSPSALRQPFVIGVSGGTASGKTTVCDMIIQQLHDHRVVLVNQDSFYRGLTAEE 120
Query: 121 SAHAQDYNFDHPDAFDTEQLLECMGQLKRAQPVNVPIYDFKNHRRSSESFRKVNASDVII 180
SAHAQDYNFDHPDAFDTEQLLECMGQLKRAQPVNVPIYDFKNHRRSSESFRKVNASDVII
Sbjct: 121 SAHAQDYNFDHPDAFDTEQLLECMGQLKRAQPVNVPIYDFKNHRRSSESFRKVNASDVII 180
Query: 181 LEGILVFHDQRVRNLMDMKIFVXXXXXXXXXXXXXXXXVERGRDVSSVLEQYGRFVKPAF 240
LEGILVFHDQRVRNLMDMKIFV VERGRDVSSVLEQYGRFVKPAF
Sbjct: 181 LEGILVFHDQRVRNLMDMKIFVDTDADIRLARRIRRDTVERGRDVSSVLEQYGRFVKPAF 240
Query: 241 DDFVLPSKKYADVIIPRGGDNHVAIDLIVQHIRTKLGQHDLCKIYPHVYVVQTTFQIRGM 300
DDFVLPSKKYADVIIPRGGDNHVAIDLIVQHIRTKLGQHDLCKIYPHVYVVQTTFQIRGM
Sbjct: 241 DDFVLPSKKYADVIIPRGGDNHVAIDLIVQHIRTKLGQHDLCKIYPHVYVVQTTFQIRGM 300
Query: 301 HTLIRDRDITTPDFVFYSDRLIRLVVEHGLGHLPFTEKQIITPTGSIYMGVEFCKKLCGV 360
HTLIRDRDITTPDFVFYSDRLIRLVVEHGLGHLPFTEKQIITPTGSIYMGVEFCKKLCGV
Sbjct: 301 HTLIRDRDITTPDFVFYSDRLIRLVVEHGLGHLPFTEKQIITPTGSIYMGVEFCKKLCGV 360
Query: 361 SIVRSGESMENALRAXXXXXXXXXXLIHRVGDNGQQLIYHKLPMDIAERHVLLLDPVLGT 420
SIVRSGESMENALRA LIHRVGDNGQQLIYHKLPMDIAERHVLLLDPVLGT
Sbjct: 361 SIVRSGESMENALRACCKGIKIGKILIHRVGDNGQQLIYHKLPMDIAERHVLLLDPVLGT 420
Query: 421 GNSANQAIELLIRKGVPEERIIFLNLISAPEGIQCVCKRFPRLKIVTSEIDTGLSEEYRV 480
GNSANQAIELLIRKGVPEERIIFLNLISAPEGIQCVCKRFPRLKIVTSEIDTGLSEEYRV
Sbjct: 421 GNSANQAIELLIRKGVPEERIIFLNLISAPEGIQCVCKRFPRLKIVTSEIDTGLSEEYRV 480
Query: 481 IPGLGEYGDRYFGTDN 496
IPGLGEYGDRYFGTDN
Sbjct: 481 IPGLGEYGDRYFGTDN 496
>Os08g0530000 Similar to Uridine kinase-like protein
Length = 491
Score = 750 bits (1937), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/423 (86%), Positives = 379/423 (89%)
Query: 73 RQPFVIGVSGGTASGKTTVCDMIIQQLHDHRVVLVNQDSFYRGLTAEESAHAQDYNFDHP 132
+QPFVIGVSGGTASGKTTVCDMIIQQLHDHRVVLVNQDSFYRGLT EES QDYNFDHP
Sbjct: 69 KQPFVIGVSGGTASGKTTVCDMIIQQLHDHRVVLVNQDSFYRGLTEEESDRVQDYNFDHP 128
Query: 133 DAFDTEQLLECMGQLKRAQPVNVPIYDFKNHRRSSESFRKVNASDVIILEGILVFHDQRV 192
DAFDTEQLLECMGQLK VN+PIYDFKNHRR SESFRKVNASDVIILEGILVFHDQRV
Sbjct: 129 DAFDTEQLLECMGQLKSGLSVNIPIYDFKNHRRCSESFRKVNASDVIILEGILVFHDQRV 188
Query: 193 RNLMDMKIFVXXXXXXXXXXXXXXXXVERGRDVSSVLEQYGRFVKPAFDDFVLPSKKYAD 252
R+LMDMKIFV VERGRDV SVLEQYGRFVKPAFDDFVLPSKKYAD
Sbjct: 189 RDLMDMKIFVDTDADIRLARRIRRDTVERGRDVISVLEQYGRFVKPAFDDFVLPSKKYAD 248
Query: 253 VIIPRGGDNHVAIDLIVQHIRTKLGQHDLCKIYPHVYVVQTTFQIRGMHTLIRDRDITTP 312
VIIPRGGDNHVAIDLIVQHIRTKLGQHDLCKIYP+VYVV TTFQIRGMHTLIRDRDI TP
Sbjct: 249 VIIPRGGDNHVAIDLIVQHIRTKLGQHDLCKIYPNVYVVNTTFQIRGMHTLIRDRDIATP 308
Query: 313 DFVFYSDRLIRLVVEHGLGHLPFTEKQIITPTGSIYMGVEFCKKLCGVSIVRSGESMENA 372
DFVFYSDRLIRLVVEHGLGHLPFTEKQI+TPTGS YMGV+FCKKLCGVSI+RSGESMENA
Sbjct: 309 DFVFYSDRLIRLVVEHGLGHLPFTEKQIVTPTGSTYMGVDFCKKLCGVSIIRSGESMENA 368
Query: 373 LRAXXXXXXXXXXLIHRVGDNGQQLIYHKLPMDIAERHVLLLDPVLGTGNSANQAIELLI 432
LRA LIHR GDNGQQLIYHK P+DIAERHVLL+DPVLGTGNSANQAIELLI
Sbjct: 369 LRACCKGIKIGKILIHRDGDNGQQLIYHKFPLDIAERHVLLMDPVLGTGNSANQAIELLI 428
Query: 433 RKGVPEERIIFLNLISAPEGIQCVCKRFPRLKIVTSEIDTGLSEEYRVIPGLGEYGDRYF 492
GVPEERI+FLNLISAPEG+ CVCKRFPRLKIVTSEI+TGL+EEYRVIPGLGEYGDRYF
Sbjct: 429 SSGVPEERIMFLNLISAPEGVHCVCKRFPRLKIVTSEIETGLNEEYRVIPGLGEYGDRYF 488
Query: 493 GTD 495
GTD
Sbjct: 489 GTD 491
>Os11g0265000 Uridine kinase family protein
Length = 491
Score = 622 bits (1603), Expect = e-178, Method: Compositional matrix adjust.
Identities = 304/490 (62%), Positives = 366/490 (74%), Gaps = 26/490 (5%)
Query: 7 DDVMDSAVGAHFSGLRLEALRLXXXXXXXXXXXXXXXXXXXXHSXXXXXXXXXXXXXXEL 66
D+V+D+A G H+S LRLE L +
Sbjct: 10 DEVLDAATGVHYSALRLEELNMNGSVSGEDQPTTSGVE---------------------- 47
Query: 67 VSPSALRQPFVIGVSGGTASGKTTVCDMIIQQLHDHRVVLVNQDSFYRGLTAEESAHAQD 126
+ ++PFVIGV+GG +SGK+TVC MII QL D RVV+V Q+SFY GL+ EE H D
Sbjct: 48 ---NGHQEPFVIGVAGGASSGKSTVCKMIIDQLRDQRVVVVTQESFYYGLSDEELVHVHD 104
Query: 127 YNFDHPDAFDTEQLLECMGQLKRAQPVNVPIYDFKNHRRSSESFRKVNASDVIILEGILV 186
YNFDHPDAFDTE LL CM LK + V++P Y+FK ++ S S RKVN SDVIILEGILV
Sbjct: 105 YNFDHPDAFDTELLLSCMENLKHGKAVDIPNYNFKTYK-SVASARKVNPSDVIILEGILV 163
Query: 187 FHDQRVRNLMDMKIFVXXXXXXXXXXXXXXXXVERGRDVSSVLEQYGRFVKPAFDDFVLP 246
FHD RVR+LM+MKIFV +E+GRD+ +VL+QY +FVKPAF+DF+LP
Sbjct: 164 FHDSRVRDLMNMKIFVDTDADVRLTRRIRRDTIEKGRDIKTVLDQYSKFVKPAFEDFILP 223
Query: 247 SKKYADVIIPRGGDNHVAIDLIVQHIRTKLGQHDLCKIYPHVYVVQTTFQIRGMHTLIRD 306
+KKYAD+IIPRGGDN VAIDLIVQHIRTKLGQHDLCK++P++YV+QTT+QIRGMHT+IRD
Sbjct: 224 TKKYADIIIPRGGDNDVAIDLIVQHIRTKLGQHDLCKVHPNLYVIQTTYQIRGMHTIIRD 283
Query: 307 RDITTPDFVFYSDRLIRLVVEHGLGHLPFTEKQIITPTGSIYMGVEFCKKLCGVSIVRSG 366
TT DF+FY+DRLIRLVVEHGLGHLPF EKQ+ITPTGS+Y GVEF K+LCG+S++RSG
Sbjct: 284 AATTTHDFIFYADRLIRLVVEHGLGHLPFKEKQVITPTGSVYTGVEFSKRLCGISVIRSG 343
Query: 367 ESMENALRAXXXXXXXXXXLIHRVGDNGQQLIYHKLPMDIAERHVLLLDPVLGTGNSANQ 426
ESMENALRA LIHR GDNG+QLIYH +P DIA RHVLLLDP+LGTGNSA Q
Sbjct: 344 ESMENALRACCKGIKIGKILIHREGDNGKQLIYHNVPKDIANRHVLLLDPILGTGNSAVQ 403
Query: 427 AIELLIRKGVPEERIIFLNLISAPEGIQCVCKRFPRLKIVTSEIDTGLSEEYRVIPGLGE 486
AI LL++KGV E IIFLNLISAP+G+ V KRFPR+KIVTSEID GL++++RVIPG+GE
Sbjct: 404 AISLLLKKGVQETNIIFLNLISAPQGVHVVSKRFPRVKIVTSEIDFGLNDDFRVIPGMGE 463
Query: 487 YGDRYFGTDN 496
+GDRYFGTD+
Sbjct: 464 FGDRYFGTDD 473
>Os02g0273000 Similar to Uridine kinase-like protein
Length = 489
Score = 617 bits (1592), Expect = e-177, Method: Compositional matrix adjust.
Identities = 305/497 (61%), Positives = 369/497 (74%), Gaps = 27/497 (5%)
Query: 1 MPEKAVDDVMDSAV-GAHFSGLRLEALRLXXXXXXXXXXXXXXXXXXXXHSXXXXXXXXX 59
M + VD+V+D+A G H+S LRL+ L +
Sbjct: 1 MGSRPVDEVLDAAAAGVHYSTLRLDELNINGSMTGEEQPTTSGVE--------------- 45
Query: 60 XXXXXELVSPSALRQPFVIGVSGGTASGKTTVCDMIIQQLHDHRVVLVNQDSFYRGLTAE 119
+ ++PFVIGV+GG +SGK+TVC MII QL D RVV+V Q+SFY GL+ E
Sbjct: 46 ----------NGHQEPFVIGVAGGASSGKSTVCKMIIDQLRDQRVVVVTQESFYYGLSDE 95
Query: 120 ESAHAQDYNFDHPDAFDTEQLLECMGQLKRAQPVNVPIYDFKNHRRSSESFRKVNASDVI 179
E H DYNFDHPDAFDTE LL CM LK + V++P Y+FK ++ S S RKVN SDVI
Sbjct: 96 ELVHVHDYNFDHPDAFDTELLLSCMENLKHGKAVDIPNYNFKTYK-SVASARKVNPSDVI 154
Query: 180 ILEGILVFHDQRVRNLMDMKIFVXXXXXXXXXXXXXXXXVERGRDVSSVLEQYGRFVKPA 239
ILEGILVFHD RVR+LM+MKIFV +E+GRD+ +VL+QY +FVKPA
Sbjct: 155 ILEGILVFHDSRVRDLMNMKIFVDTDADVRLTRRIRRDTIEKGRDIKTVLDQYSKFVKPA 214
Query: 240 FDDFVLPSKKYADVIIPRGGDNHVAIDLIVQHIRTKLGQHDLCKIYPHVYVVQTTFQIRG 299
F+DF+LP+KKYAD+IIPRGGDN VAIDLIVQHIRTKLGQHDLCK++P++YV+QTT+QIRG
Sbjct: 215 FEDFILPTKKYADIIIPRGGDNDVAIDLIVQHIRTKLGQHDLCKVHPNLYVIQTTYQIRG 274
Query: 300 MHTLIRDRDITTPDFVFYSDRLIRLVVEHGLGHLPFTEKQIITPTGSIYMGVEFCKKLCG 359
MHT+IRD TT DF+FY+DRLIRLVVEHGLGHLPF EKQ+ITPTGS+Y GVEF K+LCG
Sbjct: 275 MHTIIRDAATTTHDFIFYADRLIRLVVEHGLGHLPFKEKQVITPTGSVYTGVEFSKRLCG 334
Query: 360 VSIVRSGESMENALRAXXXXXXXXXXLIHRVGDNGQQLIYHKLPMDIAERHVLLLDPVLG 419
+S++RSGESMENALRA LIHR GDNG+QLIYH LP DIA RHVLLLDP+LG
Sbjct: 335 ISVIRSGESMENALRACCKGIKIGKILIHREGDNGKQLIYHNLPKDIANRHVLLLDPILG 394
Query: 420 TGNSANQAIELLIRKGVPEERIIFLNLISAPEGIQCVCKRFPRLKIVTSEIDTGLSEEYR 479
TGNSA QAI LL++KGV E IIFLNLISAP+G+ V KRFPR+KIVTSEI+ GL++++R
Sbjct: 395 TGNSAVQAISLLLKKGVQETNIIFLNLISAPQGVHVVSKRFPRVKIVTSEIEFGLNDDFR 454
Query: 480 VIPGLGEYGDRYFGTDN 496
VIPG+GE+GDRYFGTD+
Sbjct: 455 VIPGMGEFGDRYFGTDD 471
>AK119843
Length = 752
Score = 609 bits (1570), Expect = e-174, Method: Compositional matrix adjust.
Identities = 290/427 (67%), Positives = 346/427 (81%), Gaps = 1/427 (0%)
Query: 70 SALRQPFVIGVSGGTASGKTTVCDMIIQQLHDHRVVLVNQDSFYRGLTAEESAHAQDYNF 129
+A R +IGV+GG +SGK+TVC MII QL D RVV+V Q+SFY GL+ EE H DYNF
Sbjct: 309 TAFRYSRIIGVAGGASSGKSTVCKMIIDQLRDQRVVVVTQESFYYGLSDEELVHVHDYNF 368
Query: 130 DHPDAFDTEQLLECMGQLKRAQPVNVPIYDFKNHRRSSESFRKVNASDVIILEGILVFHD 189
DHPDAFDTE LL CM LK + V++P Y+FK ++ S S RKVN SDVIILEGILVFHD
Sbjct: 369 DHPDAFDTELLLSCMENLKHGKAVDIPNYNFKTYK-SVASARKVNPSDVIILEGILVFHD 427
Query: 190 QRVRNLMDMKIFVXXXXXXXXXXXXXXXXVERGRDVSSVLEQYGRFVKPAFDDFVLPSKK 249
RVR+LM+MKIFV +E+GRD+ +VL+QY +FVKPAF+DF+LP+KK
Sbjct: 428 SRVRDLMNMKIFVDTDADVRLTRRIRRDTIEKGRDIKTVLDQYSKFVKPAFEDFILPTKK 487
Query: 250 YADVIIPRGGDNHVAIDLIVQHIRTKLGQHDLCKIYPHVYVVQTTFQIRGMHTLIRDRDI 309
YAD+IIPRGGDN VAIDLIVQHIRTKLGQHDLCK++P++YV+QTT+QIRGMHT+IRD
Sbjct: 488 YADIIIPRGGDNDVAIDLIVQHIRTKLGQHDLCKVHPNLYVIQTTYQIRGMHTIIRDAAT 547
Query: 310 TTPDFVFYSDRLIRLVVEHGLGHLPFTEKQIITPTGSIYMGVEFCKKLCGVSIVRSGESM 369
TT DF+FY+DRLIRLVVEHGLGHLPF EKQ+ITPTGS+Y GVEF K+LCG+S++RSGESM
Sbjct: 548 TTHDFIFYADRLIRLVVEHGLGHLPFKEKQVITPTGSVYTGVEFSKRLCGISVIRSGESM 607
Query: 370 ENALRAXXXXXXXXXXLIHRVGDNGQQLIYHKLPMDIAERHVLLLDPVLGTGNSANQAIE 429
ENALRA LIHR GDNG+QLIYH LP DIA RHVL LDP+LGTGNSA QAI
Sbjct: 608 ENALRACCKGIKIGKILIHREGDNGKQLIYHNLPKDIANRHVLSLDPILGTGNSAVQAIS 667
Query: 430 LLIRKGVPEERIIFLNLISAPEGIQCVCKRFPRLKIVTSEIDTGLSEEYRVIPGLGEYGD 489
LL++KGV E IIFLNLISAP+G+ V KRFPR+KIVTSEI+ GL++++RVIPG+GE+GD
Sbjct: 668 LLLKKGVQETNIIFLNLISAPQGVHVVSKRFPRVKIVTSEIEFGLNDDFRVIPGMGEFGD 727
Query: 490 RYFGTDN 496
RYFGTD+
Sbjct: 728 RYFGTDD 734
>Os05g0455700 Uracil phosphoribosyl transferase family protein
Length = 301
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 103/207 (49%), Gaps = 15/207 (7%)
Query: 301 HTLIRD-----RDITTPDFVFYSD--RLIRLVV-EHGLGHLPFTEKQIITPTGSIYMGVE 352
H LI+ R+ TP +F S L RL++ E LP +I TP VE
Sbjct: 97 HPLIKHWVSVLRNEQTPCAIFKSAMAELGRLLIYEASRDWLPTITGEIQTPVA--VSSVE 154
Query: 353 FC---KKLCGVSIVRSGESMENALRAXXXXXXXXXXLIHRVGDNGQQLIY-HKLPMDIAE 408
F + + V I+R+G +M + + R + Q IY + LP I E
Sbjct: 155 FIDPREPVMVVPILRAGLAMAENASSVLPATKTYHLGLRRDEETLQPSIYLNNLPDKIPE 214
Query: 409 -RHVLLLDPVLGTGNSANQAIELLIRKGVPEERIIFLNLISAPEGIQCVCKRFPRLKIVT 467
VL++DP+L TG + AI+LL+ +GV ++I ++ ++AP +Q + +FP L + T
Sbjct: 215 GTRVLVVDPMLATGGTIVAAIDLLVERGVTSKQIKVVSAVAAPPALQKLSNKFPGLHVYT 274
Query: 468 SEIDTGLSEEYRVIPGLGEYGDRYFGT 494
ID+ + E ++PGLG+ GDR F T
Sbjct: 275 GTIDSEVDERGFIVPGLGDAGDRSFAT 301
>Os02g0708200 Uridine kinase family protein
Length = 652
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 86/178 (48%), Gaps = 9/178 (5%)
Query: 78 IGVSGGTASGKTTVCDMIIQQLHDHRVVLVNQDSFYRGLTAEESAHAQDYNFDHPDAFDT 137
+GV+G + +GKT + ++ + V +++ D++ +++ D NFD P D
Sbjct: 68 VGVAGPSGAGKTVFTEKVLNFMPG--VAVISMDNY------NDASRIVDGNFDDPRLTDY 119
Query: 138 EQLLECMGQLKRAQPVNVPIYDFKNHRRSSESFRKVNASDVIILEGILVFHDQRVRNLMD 197
+ LLE + LK + V VPIYDFK R+ V +S ++I+EGI +++R+++D
Sbjct: 120 DTLLENIHGLKEGRSVQVPIYDFKMSCRTGYRTVDVPSSRIVIIEGIYAL-SEKLRSVLD 178
Query: 198 MKIFVXXXXXXXXXXXXXXXXVERGRDVSSVLEQYGRFVKPAFDDFVLPSKKYADVII 255
+++ V G++ ++ Q V P + F+ P + A + I
Sbjct: 179 LRVSVTGGVHFDLVKRVLRDIQRAGQEPEEIIHQISETVYPMYKAFIEPDLQTAHIKI 236
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.323 0.141 0.416
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 14,547,587
Number of extensions: 552695
Number of successful extensions: 1058
Number of sequences better than 1.0e-10: 7
Number of HSP's gapped: 1051
Number of HSP's successfully gapped: 7
Length of query: 496
Length of database: 17,035,801
Length adjustment: 105
Effective length of query: 391
Effective length of database: 11,553,331
Effective search space: 4517352421
Effective search space used: 4517352421
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 158 (65.5 bits)