BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os09g0471000 Os09g0471000|AK103634
(226 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os09g0471000 Protein of unknown function DUF1637 family pro... 410 e-115
Os08g0133000 Protein of unknown function DUF1637 family pro... 157 5e-39
Os12g0623600 Protein of unknown function DUF1637 family pro... 136 2e-32
Os04g0151900 Protein of unknown function DUF1637 family pro... 133 1e-31
Os05g0592300 Protein of unknown function DUF1637 family pro... 131 5e-31
Os03g0654700 Protein of unknown function DUF1637 family pro... 115 2e-26
Os08g0133700 Protein of unknown function DUF1637 family pro... 103 1e-22
Os08g0480400 Protein of unknown function DUF1637 family pro... 95 4e-20
>Os09g0471000 Protein of unknown function DUF1637 family protein
Length = 226
Score = 410 bits (1054), Expect = e-115, Method: Compositional matrix adjust.
Identities = 203/226 (89%), Positives = 203/226 (89%)
Query: 1 MDDHQSKVQRLYDACDAVFSSGSKAGLPTLKQIRWLQDLLDGMEAADVGIXXXXXXXXXX 60
MDDHQSKVQRLYDACDAVFSSGSKAGLPTLKQIRWLQDLLDGMEAADVGI
Sbjct: 1 MDDHQSKVQRLYDACDAVFSSGSKAGLPTLKQIRWLQDLLDGMEAADVGIEGGGSGGERS 60
Query: 61 XXXXXXXXXXXXXRRFLSARAFTRITYVHIHECDDFSIGVFCFPAGATLPLHDHPQMVVL 120
RRFLSARAFTRITYVHIHECDDFSIGVFCFPAGATLPLHDHPQMVVL
Sbjct: 61 SSSEDDDERSPPGRRFLSARAFTRITYVHIHECDDFSIGVFCFPAGATLPLHDHPQMVVL 120
Query: 121 SKLLYGSMRVKSYDWANAPPCSGPRKSGLARVVAVDEMREAPCKASVLFPRSGGNIHSLT 180
SKLLYGSMRVKSYDWANAPPCSGPRKSGLARVVAVDEMREAPCKASVLFPRSGGNIHSLT
Sbjct: 121 SKLLYGSMRVKSYDWANAPPCSGPRKSGLARVVAVDEMREAPCKASVLFPRSGGNIHSLT 180
Query: 181 AVTPCALLDVLAPPYAEDLGRPSTYFSDIPIPSLPGTHTTCMHRNR 226
AVTPCALLDVLAPPYAEDLGRPSTYFSDIPIPSLPGTHTTCMHRNR
Sbjct: 181 AVTPCALLDVLAPPYAEDLGRPSTYFSDIPIPSLPGTHTTCMHRNR 226
>Os08g0133000 Protein of unknown function DUF1637 family protein
Length = 270
Score = 157 bits (398), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 90/225 (40%), Positives = 117/225 (52%), Gaps = 11/225 (4%)
Query: 6 SKVQRLYDACDAVFSSGSKAGLPTLKQ-------IRWLQDLLDGMEAADVGIXXXXXXXX 58
S+VQ LY+ C F S S + I + L+D + DVG+
Sbjct: 16 SRVQALYELCKRTFPSPSSVAASSSPSSPPPDHAIGAISSLMDTITPVDVGLRDDNLEDG 75
Query: 59 XXXXXXXXXXXXXXXRRFLSARAFTRITYVHIHECDDFSIGVFCFPAGATLPLHDHPQMV 118
R AR ITY+H++ECD FSIG+FC P A +PLHDHP M
Sbjct: 76 RGFGFFESNFLKNSAR---VARWAQPITYLHVYECDAFSIGIFCLPTSAVIPLHDHPGMT 132
Query: 119 VLSKLLYGSMRVKSYDWANAPPCSGPRKSGLARVVAVDEMREAPCKASVLFPRSGGNIHS 178
VLSKLLYGSM VKSYDW + + L + + D++ APC +VL+P+SGGN+H
Sbjct: 133 VLSKLLYGSMHVKSYDWVEPAVLANGKPVKLGK-LHTDDVLNAPCPTAVLYPQSGGNMHC 191
Query: 179 LTAVTPCALLDVLAPPYAEDLGRPSTYFSDIPIPSLPGTHTTCMH 223
T+V CA+LDV+APPY+E GR TYF D P S +H
Sbjct: 192 FTSVKSCAVLDVIAPPYSESSGRVCTYFHDYPFSSFSAGQAKVVH 236
>Os12g0623600 Protein of unknown function DUF1637 family protein
Length = 298
Score = 136 bits (342), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 81/214 (37%), Positives = 114/214 (53%), Gaps = 32/214 (14%)
Query: 6 SKVQRLYDACDAVFSSGSKAGLPTLKQIRWLQDLLDGMEAADVGIXXXXXXXXXXXXXXX 65
S +QRL+ AC AVF +P ++ L +LD M+ DVG+
Sbjct: 57 SPLQRLFRACRAVFRG--TGTVPAPGEVDLLCSMLDKMKPEDVGLRAD------------ 102
Query: 66 XXXXXXXXRRFLSAR----AFTRITYVHIHECDDFSIGVFCFPAGATLPLHDHPQMVVLS 121
+ F +AR I ++ECD+F++ +F P A +PLHDHP M V S
Sbjct: 103 --------QEFFTARDDDEGIPLIKNTTLYECDNFTMIIFFLPRNAIIPLHDHPGMTVFS 154
Query: 122 KLLYGSMRVKSYDWANAPPC-SGPRKSG----LARVVAVDEMREAPCKASVLFPRSGGNI 176
KLL GS+ ++SYDW + P S SG LA+ V V+ + APC SVL+P +GGN+
Sbjct: 155 KLLIGSLHIRSYDWVDPEPALSCSSSSGDQLRLAKRV-VNGVFTAPCDTSVLYPTTGGNM 213
Query: 177 HSLTAVTPCALLDVLAPPYAEDLGRPSTYFSDIP 210
H A+ PCA+LD+L PPY+ + GR TY+ IP
Sbjct: 214 HRFRAIAPCAILDILGPPYSTEDGRDCTYYRAIP 247
>Os04g0151900 Protein of unknown function DUF1637 family protein
Length = 249
Score = 133 bits (334), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 79/204 (38%), Positives = 112/204 (54%), Gaps = 12/204 (5%)
Query: 7 KVQRLYDACDAVFSSGSKAGLPTLKQIRWLQDLLDGMEAADVGIXXXXXXXXXXXXXXXX 66
K++ L +AC FS L+++R LLD + DVG+
Sbjct: 3 KIKSLSNACKVSFSPDGPISDEALERVR---ALLDEIRPIDVGLDNEAQIARNWNNSTRQ 59
Query: 67 XXXXXXXRRFLSARAFTR-ITYVHIHECDDFSIGVFCFPAGATLPLHDHPQMVVLSKLLY 125
R A FT I Y+HIHE + FS+G+FC P + +PLH+HP M VLSKLLY
Sbjct: 60 PNGR---RGRNGANQFTSPIKYLHIHESESFSMGIFCMPPSSVIPLHNHPGMTVLSKLLY 116
Query: 126 GSMRVKSYDWANAP-PCSGPRKSGL--ARVVAVDEMREAPCKASVLFPRSGGNIHSLTAV 182
G++ +SYDW + P ++ + AR+V EM AP + ++L+P GGNIH+ A+
Sbjct: 117 GTLHAESYDWIDVTDPTDQLQELSVRPARLVRDREM-SAP-ETTILYPNRGGNIHTFRAI 174
Query: 183 TPCALLDVLAPPYAEDLGRPSTYF 206
TPCAL DVL+PPY+ + GR +YF
Sbjct: 175 TPCALFDVLSPPYSAEKGRDCSYF 198
>Os05g0592300 Protein of unknown function DUF1637 family protein
Length = 274
Score = 131 bits (329), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 74/214 (34%), Positives = 110/214 (51%), Gaps = 22/214 (10%)
Query: 8 VQRLYDACDAVFSSGSKAGLPTLKQIRWLQDLLDGMEAADVGIXXXXXXXXXXXXXXXXX 67
+Q L+D VF +P + + L LL+ ++ DVGI
Sbjct: 50 MQTLFDTSREVFQDSLPGFVPPPQAVARLAALLNDLKPHDVGIEPSMSCF---------- 99
Query: 68 XXXXXXRRFLSARAFTRITYVHIHECDDFSIGVFCFPAGATLPLHDHPQMVVLSKLLYGS 127
+ ++ R+TY+H ++C FS G+FC P A +PLH+HP M V K+L+GS
Sbjct: 100 -------KNADSKGPPRVTYLHFYDCPKFSFGIFCLPKSAVIPLHNHPGMTVFCKILFGS 152
Query: 128 MRVKSYDWANAPP---CSGPRKSGLARVVAV--DEMREAPCKASVLFPRSGGNIHSLTAV 182
M +KSYDWA + P + S AR+ V D + +A + +VL+P +GGN+H TA
Sbjct: 153 MHLKSYDWAKSAPDNDNNALETSDGARLAKVNTDAVFDASSETTVLYPENGGNLHCFTAR 212
Query: 183 TPCALLDVLAPPYAEDLGRPSTYFSDIPIPSLPG 216
T CA+LDV+ PPY GR +Y+ + P S G
Sbjct: 213 TACAVLDVMGPPYNRADGRDCSYYDESPYLSSSG 246
>Os03g0654700 Protein of unknown function DUF1637 family protein
Length = 360
Score = 115 bits (288), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/240 (33%), Positives = 111/240 (46%), Gaps = 49/240 (20%)
Query: 5 QSKVQRLYDACDAVFSSGSKAGLP-TLKQIRWLQDLLDGMEAADVGIXXXXXXXXXXXXX 63
Q+ +QRL D C + SK+ P + + LL+G+ D+ +
Sbjct: 109 QNALQRLVDECRVLLDGSSKSTQPPNSTTVSRIVALLNGIGPDDLKLGTVLDTS------ 162
Query: 64 XXXXXXXXXXRRFLSARAFTR------ITYVHIHECDDFSIGVFCFPAGATLPLHDHPQM 117
A AF R I +++ECD+F++ VF PAG +PLHDHP M
Sbjct: 163 -----------EVTRAAAFRRRDPIQVIGGNYLYECDNFTVAVFYLPAGTVMPLHDHPGM 211
Query: 118 VVLSKLLYGSMRVKSYDWANAPPCSGPRKSGLARVV----------AVDEMREAPCKASV 167
V SKLL GS+ V+S+DW +P G SG R V +D + EA C V
Sbjct: 212 TVFSKLLAGSVHVQSFDWV-SPSVYG---SGGKRAVHSKNTKLVKKVLDHVVEAGCGTWV 267
Query: 168 LFPRSGGNIHSLTAVT--PCALLDVLAPPYAEDLGRPSTYFSDIPIPSLPGTHTTCMHRN 225
L+P +GGN+H A PCA LDVL PPY+E R T++ D P +HRN
Sbjct: 268 LYPSTGGNLHRFVAGVDGPCAFLDVLTPPYSEGRLRRCTFYRDYPF---------QLHRN 318
>Os08g0133700 Protein of unknown function DUF1637 family protein
Length = 205
Score = 103 bits (256), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/177 (37%), Positives = 86/177 (48%), Gaps = 14/177 (7%)
Query: 6 SKVQRLYDACDAVFSSGSKAGLPTLKQ-------IRWLQDLLDGMEAADVGIXXXXXXXX 58
S+VQ LY+ C F S S + IR + L+D + DVG+
Sbjct: 16 SRVQALYELCKRTFPSPSSVAASSSPSSPPPDHAIRAISSLMDTITPVDVGLRDDNLEDG 75
Query: 59 XXXXXXXXXXXXXXXRRFLSARAFTRITYVHIHECDDFSIGVFCFPAGATLPLHDHPQMV 118
R AR ITY+H++ECD FSIG+FC P A +PLHDHP M
Sbjct: 76 RGFGFFESNFLKNSAR---VARWAQPITYLHVYECDAFSIGIFCLPTSAVIPLHDHPGMT 132
Query: 119 VLSKLLYGSMRVKSYDWANAPPCSGPRKSGLARVVAVDEMREAPCKASVLFPRSGGN 175
VLSKLLYGSM VKSYDW + + L + + D++ APC +V SGG+
Sbjct: 133 VLSKLLYGSMHVKSYDWVEPAVLASGKPVKLGK-LHTDDVLNAPCPTAVF---SGGD 185
>Os08g0480400 Protein of unknown function DUF1637 family protein
Length = 113
Score = 94.7 bits (234), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 51/98 (52%), Positives = 61/98 (62%), Gaps = 3/98 (3%)
Query: 6 SKVQRLYDACDAVFSSGSKAGLPTLKQIRWLQDLLDGMEAADVGIXXXXXXXXXXXXXXX 65
SK+QRLYDACD +FSS + A PT+ +IRWLQ LLDGMEAADVGI
Sbjct: 13 SKMQRLYDACDMIFSSPASAA-PTIGEIRWLQHLLDGMEAADVGIDDGESPPSSSSSSCS 71
Query: 66 XXXXXXXXR--RFLSARAFTRITYVHIHECDDFSIGVF 101
+ R L ARAFTRITY+HIH+C DFS+ +
Sbjct: 72 SSDDEVSSKDGRLLPARAFTRITYMHIHQCADFSVRTY 109
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.323 0.137 0.435
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 7,641,358
Number of extensions: 293218
Number of successful extensions: 667
Number of sequences better than 1.0e-10: 8
Number of HSP's gapped: 653
Number of HSP's successfully gapped: 8
Length of query: 226
Length of database: 17,035,801
Length adjustment: 97
Effective length of query: 129
Effective length of database: 11,971,043
Effective search space: 1544264547
Effective search space used: 1544264547
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 154 (63.9 bits)