Os09g0471000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF1637 family protein.
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Os09g0471000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF1637 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 202.47 | 0.669 | 3.31 | 0.478 | 0.203 | 1.76 | 0.363 | 2.91 | -0.0699 | 12.8 | 1016 | 5643 | -- | -- |
| 207.43 | 0.671 | 3.23 | 0.464 | 0.218 | 0.62 | 0.641 | -- | -0.0407 | 13.8 | 1015 | 5696 | -- | -- |
| 201.95 | 0.662 | 3.34 | 0.593 | 0.193 | 2.96 | -- | 5.4 | -0.0736 | 11.9 | 1016 | 5446 | -- | -- |
| 206.62 | 0.669 | 3.24 | 0.538 | 0.237 | 0.547 | -- | -- | -0.0331 | 11.9 | 1014 | 6341 | -- | -- |
| 204.06 | 0.665 | 3.56 | 0.986 | -- | 7.48 | -- | 15.2 | -0.0748 | -- | 1017 | 5445 | -- | -- |
| 214.88 | 0.687 | 3.27 | 0.335 | 0.212 | -- | 0.302 | -- | -0.144 | 12.7 | -- | -- | -- | -- |
| 215.15 | 0.687 | 3.27 | 0.345 | 0.215 | -- | -- | -- | -0.143 | 11.8 | -- | -- | -- | -- |
| 209.49 | 0.674 | 3.25 | 0.54 | -- | 0.551 | -- | -- | -0.0384 | -- | 1014 | 6184 | -- | -- |
| 213.01 | 0.68 | 3.26 | -- | 0.208 | 0.433 | -- | -- | -0.12 | 11.4 | 1014 | 5586 | -- | -- |
| 218.07 | 0.69 | 3.27 | 0.339 | -- | -- | -- | -- | -0.146 | -- | -- | -- | -- | -- |
| 218.29 | 0.691 | 3.27 | -- | 0.211 | -- | -- | -- | -0.182 | 11.7 | -- | -- | -- | -- |
| 215.73 | 0.684 | 3.27 | -- | -- | 0.441 | -- | -- | -0.123 | -- | 1014 | 5517 | -- | -- |
| 221.1 | 0.694 | 3.28 | -- | -- | -- | -- | -- | -0.183 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 201.08 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 17 | 9 |
| 21 | 201.08 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 17 | 9 |
| 49 | 201.76 | wind | 5.0 | 30 | > th | dose independent | rect. | 17 | 4 |
| 51 | 201.95 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 19 | 7 |
| 55 | 201.95 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 19 | 7 |
| 59 | 201.96 | wind | 7.0 | 30 | > th | dose independent | rect. | 19 | 1 |
| 61 | 202.36 | wind | 7.0 | 30 | > th | dose dependent | rect. | 19 | 1 |
| 63 | 202.66 | atmosphere | 1015.0 | 4320 | > th | dose dependent | rect. | 8 | 1 |
| 65 | 202.72 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 8 | 2 |
| 69 | 202.76 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 8 | 2 |
| 70 | 202.83 | radiation | 10.0 | 4320 | < th | dose dependent | rect. | 12 | 1 |
| 71 | 202.86 | atmosphere | 1015.0 | 4320 | < th | dose independent | rect. | 8 | 1 |
| 72 | 202.87 | atmosphere | 1015.0 | 4320 | > th | dose independent | rect. | 8 | 1 |
| 87 | 203.12 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 2 | 8 |
| 115 | 203.22 | humidity | 60.0 | 4320 | > th | dose dependent | rect. | 9 | 2 |
| 143 | 203.36 | atmosphere | 1015.0 | 4320 | < th | dose independent | rect. | 13 | 1 |
| 157 | 203.38 | atmosphere | 1015.0 | 4320 | > th | dose dependent | rect. | 12 | 1 |
| 160 | 203.39 | atmosphere | 1015.0 | 4320 | > th | dose independent | rect. | 12 | 1 |
| 165 | 203.40 | humidity | 60.0 | 4320 | > th | dose dependent | rect. | 8 | 4 |
| 195 | 203.51 | atmosphere | 1015.0 | 4320 | < th | dose independent | rect. | 16 | 4 |
| 203 | 203.53 | humidity | 50.0 | 90 | < th | dose dependent | rect. | 13 | 2 |
| 209 | 203.55 | humidity | 50.0 | 90 | < th | dose independent | rect. | 13 | 2 |
| 252 | 203.62 | atmosphere | 1015.0 | 4320 | < th | dose independent | rect. | 18 | 2 |
| 285 | 203.69 | humidity | 90.0 | 4320 | < th | dose dependent | rect. | 9 | 2 |
| 359 | 203.89 | atmosphere | 1015.0 | 4320 | > th | dose dependent | rect. | 9 | 11 |
| 370 | 203.93 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 12 | 5 |
| 542 | 204.24 | humidity | 70.0 | 4320 | < th | dose independent | sin | 7 | NA |
| 572 | 204.27 | humidity | 70.0 | 4320 | > th | dose independent | sin | 7 | NA |
| 581 | 204.28 | wind | 5.0 | 30 | > th | dose dependent | rect. | 17 | 4 |
| 593 | 204.29 | atmosphere | 1015.0 | 4320 | > th | dose dependent | sin | 2 | NA |
| 597 | 204.30 | atmosphere | 1015.0 | 4320 | < th | dose independent | sin | 1 | NA |
| 610 | 204.31 | humidity | 60.0 | 4320 | < th | dose dependent | rect. | 13 | 1 |
| 623 | 204.34 | atmosphere | 1015.0 | 4320 | > th | dose independent | sin | 1 | NA |
| 656 | 204.39 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 1 | 2 |
| 661 | 204.39 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 1 | 2 |
| 673 | 204.42 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 12 | 2 |
| 692 | 204.44 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 1 | 1 |
| 709 | 204.44 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 1 | 1 |
| 764 | 204.49 | humidity | 50.0 | 4320 | < th | dose independent | rect. | 12 | 5 |
| 775 | 204.51 | wind | 3.0 | 1440 | > th | dose independent | rect. | 2 | 1 |
| 776 | 204.51 | wind | 3.0 | 1440 | < th | dose independent | rect. | 2 | 1 |
| 794 | 204.54 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 795 | 204.54 | atmosphere | 1000.0 | 90 | < th | dose dependent | rect. | 12 | 1 |
| 806 | 204.57 | atmosphere | 1000.0 | 90 | < th | dose independent | rect. | 12 | 1 |
| 811 | 204.57 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 12 | 16 |
| 812 | 204.57 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 12 | 19 |
| 816 | 204.58 | humidity | 50.0 | 4320 | < th | dose independent | rect. | 13 | 1 |
| 844 | 204.61 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 12 | 13 |
| 896 | 204.68 | wind | 5.0 | 4320 | < th | dose independent | rect. | 24 | 1 |
| 900 | 204.68 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 7 | 4 |
| 901 | 204.68 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 7 | 7 |
| 915 | 204.70 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 15 | 2 |
| 926 | 204.72 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 6 | 2 |
| 930 | 204.72 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 7 | 2 |
| 931 | 204.72 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 6 | 2 |
| 936 | 204.73 | wind | 5.0 | 4320 | > th | dose independent | rect. | 24 | 1 |