BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os09g0463600 Os09g0463600|AK121134
(244 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os09g0463600 Protein of unknown function DUF617, plant fami... 441 e-124
Os08g0476600 Protein of unknown function DUF617, plant fami... 350 4e-97
Os05g0577100 Protein of unknown function DUF617, plant fami... 151 5e-37
Os01g0642600 Protein of unknown function DUF617, plant fami... 145 3e-35
Os01g0806400 Protein of unknown function DUF617, plant fami... 138 5e-33
Os01g0268700 129 2e-30
Os08g0171800 Protein of unknown function DUF617, plant fami... 123 1e-28
Os04g0638800 Protein of unknown function DUF617, plant fami... 117 1e-26
Os02g0709600 Protein of unknown function DUF617, plant fami... 116 2e-26
Os05g0280150 100 1e-21
Os03g0733266 79 4e-15
>Os09g0463600 Protein of unknown function DUF617, plant family protein
Length = 244
Score = 441 bits (1135), Expect = e-124, Method: Compositional matrix adjust.
Identities = 222/244 (90%), Positives = 222/244 (90%)
Query: 1 MPSFVDGPTLRSLLRPSTNGRRTKASDXXXXXXXXXIFKMFKLMPMLTSGCKMVALLGRH 60
MPSFVDGPTLRSLLRPSTNGRRTKASD IFKMFKLMPMLTSGCKMVALLGRH
Sbjct: 1 MPSFVDGPTLRSLLRPSTNGRRTKASDGGGGGGGGGIFKMFKLMPMLTSGCKMVALLGRH 60
Query: 61 NRALLADHATTVTLFGHRRGRVSLAIHEDTRAPPVFLIELPMLTSALHKEISSGVVKLAL 120
NRALLADHATTVTLFGHRRGRVSLAIHEDTRAPPVFLIELPMLTSALHKEISSGVVKLAL
Sbjct: 61 NRALLADHATTVTLFGHRRGRVSLAIHEDTRAPPVFLIELPMLTSALHKEISSGVVKLAL 120
Query: 121 ESDTRSARRRLVEEYVWAVYCNGRKAGYSIRRKEASDDERHVLRLLRGVSMGAGVLPAAP 180
ESDTRSARRRLVEEYVWAVYCNGRKAGYSIRRKEASDDERHVLRLLRGVSMGAGVLPAAP
Sbjct: 121 ESDTRSARRRLVEEYVWAVYCNGRKAGYSIRRKEASDDERHVLRLLRGVSMGAGVLPAAP 180
Query: 181 EKEGGVPAGPDGELTYVRARVERVVGSKDSEAFYMINPNEXXXXXXXXXXXXXPELSIFL 240
EKEGGVPAGPDGELTYVRARVERVVGSKDSEAFYMINPNE PELSIFL
Sbjct: 181 EKEGGVPAGPDGELTYVRARVERVVGSKDSEAFYMINPNEGGVGGDSAGDGSAPELSIFL 240
Query: 241 VRMK 244
VRMK
Sbjct: 241 VRMK 244
>Os08g0476600 Protein of unknown function DUF617, plant family protein
Length = 1589
Score = 350 bits (899), Expect = 4e-97, Method: Composition-based stats.
Identities = 182/256 (71%), Positives = 205/256 (80%), Gaps = 14/256 (5%)
Query: 1 MPSFVDGP-TLRSLLRPSTNGRRT----KASDXXXXXXXXXIFKMFKLMPMLTSGCKMVA 55
MPS +DG +LRSLLRPS++GRRT IFKMFKL+PMLT+GCKM A
Sbjct: 1 MPSLIDGAASLRSLLRPSSDGRRTTKLSGGGGGGGAGGVGGIFKMFKLLPMLTTGCKMAA 60
Query: 56 LLGRHN--RA--LLADHATTVTLFGHRRGRVSLAIHEDTRAPPVFLIELPMLTSALHKEI 111
LLGRH+ RA LLADHA TVTLFGHRRGR+SLAIHEDTRAPP FLIELPML SA+H+E+
Sbjct: 61 LLGRHSGGRAAPLLADHAPTVTLFGHRRGRLSLAIHEDTRAPPAFLIELPMLASAMHREM 120
Query: 112 SSGVVKLALESDTRSARRRLVEEYVWAVYCNGRKAGYSIRRKEASDDERHVLRLLRGVSM 171
++G VKLALESDTRSARRRL+EEYVWAV+CNGRKAGY+IRRK+ASDD+RHVLRLLRGVSM
Sbjct: 121 ATGTVKLALESDTRSARRRLLEEYVWAVFCNGRKAGYAIRRKDASDDDRHVLRLLRGVSM 180
Query: 172 GAGVLPAAP-EKEGGVPAGPDGELTYVRARVERVVGSKDSEAFYMINPNEXXXX--XXXX 228
GAGVLP P ++ GG AGPDGELTY+RARVERVVGSKDSEAFYMINP++
Sbjct: 181 GAGVLPPPPADRRGG--AGPDGELTYMRARVERVVGSKDSEAFYMINPDDGSDNGGAAGR 238
Query: 229 XXXXXPELSIFLVRMK 244
PELSIFLVR K
Sbjct: 239 DRECAPELSIFLVRKK 254
>Os05g0577100 Protein of unknown function DUF617, plant family protein
Length = 297
Score = 151 bits (381), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 90/202 (44%), Positives = 121/202 (59%), Gaps = 22/202 (10%)
Query: 54 VALLGRHNRALLADHATTVTLFGHRRGRVSLAIHEDTRAPPVFLIELPMLTSALHKEISS 113
A+ GRH + L T TL+GHRRG V LA D RA P L+EL T+AL +E++S
Sbjct: 106 AAVTGRHRQVGLGARLTG-TLYGHRRGHVHLAFQLDPRACPALLLELAAPTAALVREMAS 164
Query: 114 GVVKLALESD------------TRSARRRLVEEYVWAVYCNGRKAGYSIRRKEASDDERH 161
G+V++ALE + +RL+EE VW YCNG+ GY++RR+ + D R
Sbjct: 165 GLVRIALECERAKGGPAPALPTATGGGKRLLEETVWRAYCNGKSCGYAVRRECGAADWR- 223
Query: 162 VLRLLRGVSMGAGVLPAAPEKEGGVPAGPDGELTYVRARVERVVGSKDSEAFYMINPNEX 221
VLR L VSMGAGV+PAA G +G++ Y+RAR ERVVGS+DSEAFYM+NP+
Sbjct: 224 VLRALEPVSMGAGVIPAAS------CGGGEGDVMYMRARFERVVGSRDSEAFYMMNPDS- 276
Query: 222 XXXXXXXXXXXXPELSIFLVRM 243
PELS++L+R+
Sbjct: 277 -TSTSSNSNSGGPELSVYLLRV 297
>Os01g0642600 Protein of unknown function DUF617, plant family protein
Length = 303
Score = 145 bits (366), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 90/212 (42%), Positives = 121/212 (57%), Gaps = 38/212 (17%)
Query: 58 GRHNRALLADHATTVTLFGHRRGRVSLAIHEDTRAPPVFLIELPMLTSALHKEISSGVVK 117
GRH + L T TL+GHRRG V LA D RA P L+EL T++L +E++SG+V+
Sbjct: 104 GRHRQVGLGARLTG-TLYGHRRGHVHLAFQVDPRACPALLLELAAPTASLVREMASGLVR 162
Query: 118 LALESD--------------------------TRSARRRLVEEYVWAVYCNGRKAGYSIR 151
+ALE + + + R+LVEE VW YCNGR GY++R
Sbjct: 163 IALECERAKGGGACAFPTAAAAPSSSSSSSSSSSAGGRKLVEETVWRAYCNGRSCGYAVR 222
Query: 152 RKEASDDERHVLRLLRGVSMGAGVLPAAPEKEGGVPAGPDGELTYVRARVERVVGSKDSE 211
R+ + D R VLR L VSMGAGV+PAA G +G++ Y+RAR ERVVGS+DSE
Sbjct: 223 RECGAADWR-VLRALEPVSMGAGVIPAA-------CGGGEGDVMYMRARFERVVGSRDSE 274
Query: 212 AFYMINPNEXXXXXXXXXXXXXPELSIFLVRM 243
AFYM+NP+ PELS++L+R+
Sbjct: 275 AFYMMNPD---CGGSGSNNNGGPELSVYLLRV 303
>Os01g0806400 Protein of unknown function DUF617, plant family protein
Length = 272
Score = 138 bits (347), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 86/247 (34%), Positives = 135/247 (54%), Gaps = 26/247 (10%)
Query: 12 SLLRPSTNGRRTKASDXXXXXXXXXIFKMFKLMPMLTSGCKMVALL---GRHNRA----L 64
+L P + +R + + +F+ +P+L C+ + G +RA +
Sbjct: 37 TLTAPPSKKKRRGGAAARSLRAIRAVRALFRSLPILAPACRFHGAIRAPGGASRAHDGHV 96
Query: 65 LADHATTVTLFGHRRGRVSLAIHEDTRAPPVFLIELPMLTSALHKEISSGVVKLALESDT 124
TT TLFG+R+ RV+LA+ E + P+ L+EL M T +E+ + +++ALE +
Sbjct: 97 SGASRTTGTLFGYRKARVTLAVQETPGSVPILLLELAMQTGRFMQEMGAEHLRVALECEK 156
Query: 125 RS-------ARRRLVEEYVWAVYCNGRKAGYSIRRKEASDDERHVLRLLRGVSMGAGVLP 177
+ R RL++E +W Y NGRK GY++RR E ++ + V++LLR VS+GAGVLP
Sbjct: 157 KPPGAGAGIGRTRLLDEPLWTAYVNGRKIGYAMRR-EPTEGDLTVMQLLRTVSVGAGVLP 215
Query: 178 A-APEKEGGVPAGPDGELTYVRARVERVVGSKDSEAFYMINPNEXXXXXXXXXXXXXPEL 236
+ G G+L Y+RAR +RVVGS+DSE+FYM+NP+ PEL
Sbjct: 216 TDVMGGDAGAEVQDAGDLAYMRARFDRVVGSRDSESFYMLNPD----------GNNGPEL 265
Query: 237 SIFLVRM 243
SIF +R+
Sbjct: 266 SIFFIRI 272
>Os01g0268700
Length = 543
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 75/188 (39%), Positives = 109/188 (57%), Gaps = 27/188 (14%)
Query: 70 TTVTLFGHRRGRVSLAIHEDTRAPPVFLIELPMLTSALHKEISS-GVVKLALESDTRSAR 128
TT TL+GHRR R+++A H+ +PP L+++ + T+ +++S+ G+V++ LE D + +
Sbjct: 367 TTGTLYGHRRARITIAFHDSPGSPPALLLDIAVPTAKFIQDVSAAGMVRVTLECDKQQHQ 426
Query: 129 --------------RRLVEEYVWAVYCNGRKAGYSIRRKEASDDERHVLRLLRGVSMGAG 174
RRL++E VW+ NG GY+ RR+ DER V+RLL +SMGAG
Sbjct: 427 PPPHAHPPGDPLPPRRLLDEPVWSAEVNGESVGYAARREATEADER-VMRLLHAMSMGAG 485
Query: 175 VLPAAPEKEGGVPAGPDGELTYVRARVERVVGSKDSEAFYMINPNEXXXXXXXXXXXXXP 234
VLPA A DGE+TY+RA +RVVGSKD+E +YM NP P
Sbjct: 486 VLPAVAADAPTSAA--DGEVTYMRAHFDRVVGSKDAETYYMHNPE---------GCATGP 534
Query: 235 ELSIFLVR 242
EL+IF +R
Sbjct: 535 ELTIFFIR 542
>Os08g0171800 Protein of unknown function DUF617, plant family protein
Length = 315
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/195 (41%), Positives = 111/195 (56%), Gaps = 35/195 (17%)
Query: 71 TVTLFGHRRGRVSLAIHEDTRAPPVFLIELPMLTSALHKEISSGV-VKLALESDTRSA-- 127
T TLFGHR+GRV+LA+ E R P +IEL + T+AL +E+++ ++ LE++ R+
Sbjct: 134 TGTLFGHRKGRVALALQETPRCLPTLVIELAIQTNALLRELANPAGARIVLETERRAPST 193
Query: 128 ------RRR---LVEEYVWAVYCNGRKAGYSIRRKEASDDERHVLRLLRGVSMGAGVLPA 178
RR L++ W ++CNGRK G ++RR EA+DD+ VL LR VSMGAGVLPA
Sbjct: 194 DAAAGKHRRAPPLLDVAAWTMFCNGRKTGLAVRR-EATDDDLAVLETLRPVSMGAGVLPA 252
Query: 179 ----------APEKEGGVPAGPDGELTYVRARVERVVGSKDSEAFYMINPNEXXXXXXXX 228
+PEK A D E+ Y+R + VGS+DSE+ YMI P
Sbjct: 253 SNRSSSSSSQSPEKGA---AAADDEVAYMRGCFDHFVGSRDSESLYMIAPQ--------- 300
Query: 229 XXXXXPELSIFLVRM 243
PEL+IF VR+
Sbjct: 301 GGGTGPELAIFFVRL 315
>Os04g0638800 Protein of unknown function DUF617, plant family protein
Length = 301
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/193 (34%), Positives = 110/193 (56%), Gaps = 36/193 (18%)
Query: 71 TVTLFGHRRGRVSLAIHEDTRAPPVFLIELPMLTSALHKEI-SSGVVKLALESDTR---- 125
T TLFG+R R++L++ ++ R P ++EL + T AL +++ ++ ++ LES+ R
Sbjct: 125 TGTLFGYRDARIALSLQDNPRCQPTLVVELALPTHALLRDLGTTAGARIVLESEKRAADG 184
Query: 126 --------SARRR-------LVEEYVWAVYCNGRKAGYSIRRKEASDDERHVLRLLRGVS 170
S+RR ++EE +W + CNG+K GY++RR + +DD+ VL L VS
Sbjct: 185 GDGAGAGASSRREREQQDGWVLEESMWTMSCNGKKVGYAVRR-DPTDDDIAVLETLWAVS 243
Query: 171 MGAGVLPAAPEKEGGVPAGPDGELTYVRARVERVVGSKDSEAFYMINPNEXXXXXXXXXX 230
MG GVLP + +G DGE+ Y+R E ++GS++SE+ YMI+P+
Sbjct: 244 MGGGVLPGISDMDG-----KDGEMAYMRGSFEHIIGSRNSESLYMISPH----------G 288
Query: 231 XXXPELSIFLVRM 243
PEL++F VR+
Sbjct: 289 GDCPELAVFFVRL 301
>Os02g0709600 Protein of unknown function DUF617, plant family protein
Length = 247
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/154 (46%), Positives = 95/154 (61%), Gaps = 20/154 (12%)
Query: 96 FLIELPML-TSALHKEISSGVVKLALESDTR-----SARRRLVEEYVWAVYCNGRKAGYS 149
FL E+ T AL +E+SSG+V+LALE + + RR L+EE W YCNGRK G++
Sbjct: 108 FLAEMAAYSTGALVREMSSGLVRLALECEKQPINPGEKRRALLEEPTWRAYCNGRKCGFA 167
Query: 150 IRRKEASDDERHVLRLLRGVSMGAGVLPAAPEKEGGVPAGPDGELTYVRARVERVVGSKD 209
+RR E DE VL + VS+GAGVLP + A +G+L Y+RAR ERVVGS+D
Sbjct: 168 VRR-ECGADEWRVLGAVEPVSVGAGVLP---DDAAAAAAAEEGDLMYMRARFERVVGSRD 223
Query: 210 SEAFYMINPNEXXXXXXXXXXXXXPELSIFLVRM 243
SEAFYM+NP+ PELSI+L+R+
Sbjct: 224 SEAFYMMNPD----------GSGGPELSIYLLRV 247
>Os05g0280150
Length = 412
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/195 (33%), Positives = 95/195 (48%), Gaps = 30/195 (15%)
Query: 68 HATTV--TLFGHRRGRVSLAIHEDTRAPPVFLIELPMLTSALHKEISSGVVKLALESDTR 125
H T + T+FG R G V+ + D PP FL EL + +L E+ SG++++ALE
Sbjct: 79 HCTIIVGTIFGRRSGHVTFCVQRDAAMPPPFLFELSVPMLSLAAEMGSGLLRIALECHHS 138
Query: 126 SARRRL----------------VEEYVWAVYCNGRKAGYSIRRKEASDDERHVLRLLRGV 169
S + + VW CNGR GY++RR+ D R VL +R
Sbjct: 139 SGKVVVGAADGDTINNAGTGGGGSRSVWKASCNGRDVGYAVRRRPTDQDCR-VLESMRMT 197
Query: 170 SMGAGVLPAAPEKEGGVPAGPDGELTYVRARVERVVGSKDSEAFYMINPNEXXXXXXXXX 229
+ G GVLP+ E G G++ Y+RA ERVVGSKD+ ++++I P
Sbjct: 198 TTGVGVLPSTGFSEDGG----GGDVLYMRATYERVVGSKDAVSYHLITPGTASGSPQQ-- 251
Query: 230 XXXXPELSIFLVRMK 244
ELS+FL+R +
Sbjct: 252 -----ELSVFLLRTR 261
>Os03g0733266
Length = 231
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/156 (34%), Positives = 78/156 (50%), Gaps = 23/156 (14%)
Query: 73 TLF-----GHRRGRVSLAIHEDTRAP-----PVFLIELPMLTSALHKEISSGVVKLALES 122
TLF G RR R+ L H+ + +P + +++LP S ++G V L +
Sbjct: 70 TLFLPSTGGDRRVRLFLHEHDPSPSPDENHQAILVLDLPPGLSGADI-AAAGRVVLECQR 128
Query: 123 DTRSARRRLVEEYVWAVYCNGRKAGYSIRRKEASDDERHVLRLLRGVSMGAGVLPAAPEK 182
+ L+E W VYCNGR+ G++ RR EASD E VL L V+ GAG LP
Sbjct: 129 QWNNGGGALLESAKWLVYCNGRRVGFAARRGEASDAEGWVLEKLWAVTAGAGRLPGGAGV 188
Query: 183 EGGVPAGPDGELTYVRARVERVVGSKDSEAFYMINP 218
E Y+R R ER V S D+E+F++++P
Sbjct: 189 E------------YMRGRFERTVASSDAESFHLVDP 212
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.321 0.136 0.394
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 7,592,416
Number of extensions: 307575
Number of successful extensions: 777
Number of sequences better than 1.0e-10: 11
Number of HSP's gapped: 749
Number of HSP's successfully gapped: 11
Length of query: 244
Length of database: 17,035,801
Length adjustment: 98
Effective length of query: 146
Effective length of database: 11,918,829
Effective search space: 1740149034
Effective search space used: 1740149034
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 154 (63.9 bits)