Os09g0463600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF617, plant family protein.
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Os09g0463600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF617, plant family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 309 | 0.826 | 3.49 | -0.832 | 0.619 | 1.52 | -0.119 | -4.15 | -0.57 | 5.82 | 23.16 | 742 | -- | -- |
| 315.93 | 0.828 | 3.4 | -0.00404 | 0.567 | 1.17 | 0.41 | -- | -0.362 | 5.35 | 21.9 | 717 | -- | -- |
| 309.01 | 0.819 | 3.49 | -0.817 | 0.604 | 1.5 | -- | -4.04 | -0.565 | 5.8 | 23.16 | 750 | -- | -- |
| 316.38 | 0.828 | 3.4 | -0.00146 | 0.559 | 1.16 | -- | -- | -0.363 | 5.31 | 21.9 | 729 | -- | -- |
| 312.47 | 0.823 | 3.51 | -0.884 | -- | 1.34 | -- | -3.85 | -0.531 | -- | 24.3 | 1107 | -- | -- |
| 344.29 | 0.87 | 3.36 | 0.311 | 0.375 | -- | 0.186 | -- | -0.158 | 2.44 | -- | -- | -- | -- |
| 344.42 | 0.869 | 3.36 | 0.306 | 0.376 | -- | -- | -- | -0.159 | 2.43 | -- | -- | -- | -- |
| 320.78 | 0.834 | 3.4 | 0.0105 | -- | 1 | -- | -- | -0.342 | -- | 22.46 | 1070 | -- | -- |
| 316.33 | 0.828 | 3.4 | -- | 0.526 | 1.13 | -- | -- | -0.352 | 5.37 | 21.97 | 749 | -- | -- |
| 352.75 | 0.878 | 3.36 | 0.322 | -- | -- | -- | -- | -0.15 | -- | -- | -- | -- | -- |
| 346.88 | 0.871 | 3.37 | -- | 0.382 | -- | -- | -- | -0.193 | 2.44 | -- | -- | -- | -- |
| 320.78 | 0.834 | 3.4 | -- | -- | 1 | -- | -- | -0.345 | -- | 22.45 | 1073 | -- | -- |
| 355.48 | 0.88 | 3.37 | -- | -- | -- | -- | -- | -0.186 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 305.04 | temperature | 25 | 720 | > th | dose dependent | rect. | 12 | 20 |
| 3 | 305.23 | temperature | 25 | 720 | > th | dose dependent | rect. | 12 | 13 |
| 30 | 306.78 | temperature | 25 | 720 | > th | dose dependent | sin | 17 | NA |
| 37 | 307.02 | temperature | 20 | 10 | > th | dose dependent | sin | 11 | NA |
| 52 | 307.52 | temperature | 25 | 1440 | > th | dose dependent | rect. | 12 | 2 |
| 67 | 308.24 | temperature | 20 | 90 | > th | dose dependent | rect. | 17 | 17 |
| 90 | 308.61 | temperature | 20 | 90 | > th | dose dependent | rect. | 12 | 23 |
| 99 | 308.73 | temperature | 25 | 90 | > th | dose independent | rect. | 12 | 23 |
| 126 | 309.35 | temperature | 25 | 90 | > th | dose independent | sin | 14 | NA |
| 130 | 309.43 | temperature | 25 | 90 | > th | dose independent | rect. | 16 | 19 |
| 142 | 309.70 | temperature | 20 | 10 | > th | dose dependent | rect. | 13 | 22 |
| 170 | 310.21 | temperature | 25 | 270 | > th | dose independent | rect. | 14 | 18 |
| 195 | 310.63 | temperature | 25 | 1440 | > th | dose independent | rect. | 19 | 4 |
| 288 | 311.30 | temperature | 25 | 720 | > th | dose dependent | rect. | 5 | 21 |
| 294 | 311.31 | temperature | 25 | 720 | > th | dose dependent | no | NA | NA |
| 332 | 311.42 | temperature | 25 | 1440 | < th | dose independent | rect. | 19 | 4 |
| 366 | 311.58 | temperature | 25 | 1440 | < th | dose independent | rect. | 18 | 6 |
| 375 | 311.62 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 13 |
| 377 | 311.64 | temperature | 25 | 1440 | > th | dose dependent | rect. | 17 | 22 |
| 429 | 311.90 | temperature | 30 | 1440 | < th | dose independent | rect. | 14 | 1 |
| 441 | 311.91 | temperature | 25 | 720 | > th | dose dependent | rect. | 21 | 23 |
| 475 | 311.99 | temperature | 30 | 720 | < th | dose independent | rect. | 14 | 16 |
| 503 | 312.07 | temperature | 20 | 4320 | < th | dose independent | rect. | 5 | 1 |
| 505 | 312.07 | temperature | 10 | 720 | > th | dose dependent | rect. | 13 | 11 |
| 552 | 312.21 | temperature | 20 | 4320 | > th | dose independent | rect. | 5 | 1 |
| 561 | 312.24 | temperature | 25 | 30 | < th | dose independent | sin | 13 | NA |
| 562 | 312.24 | temperature | 20 | 4320 | > th | dose independent | rect. | 4 | 3 |
| 614 | 312.42 | temperature | 30 | 720 | > th | dose independent | rect. | 13 | 3 |
| 620 | 312.45 | temperature | 25 | 720 | > th | dose independent | rect. | 12 | 12 |
| 677 | 312.70 | temperature | 30 | 1440 | > th | dose independent | rect. | 14 | 1 |
| 680 | 312.72 | temperature | 25 | 1440 | > th | dose dependent | rect. | 5 | 10 |
| 708 | 312.80 | temperature | 25 | 270 | > th | dose independent | rect. | 14 | 10 |
| 779 | 313.11 | temperature | 25 | 720 | > th | dose independent | rect. | 10 | 14 |
| 787 | 313.14 | temperature | 20 | 1440 | > th | dose dependent | rect. | 21 | 1 |
| 806 | 313.26 | temperature | 25 | 720 | < th | dose independent | rect. | 10 | 13 |
| 812 | 313.30 | temperature | 30 | 270 | < th | dose dependent | sin | 15 | NA |
| 816 | 313.32 | temperature | 25 | 720 | < th | dose independent | rect. | 10 | 16 |
| 826 | 313.38 | temperature | 25 | 30 | > th | dose independent | rect. | 17 | 11 |
| 835 | 313.41 | temperature | 30 | 270 | < th | dose dependent | rect. | 16 | 11 |
| 879 | 313.58 | temperature | 25 | 4320 | > th | dose dependent | rect. | 17 | 2 |
| 924 | 313.71 | temperature | 25 | 720 | > th | dose independent | sin | 18 | NA |
| 946 | 313.81 | temperature | 25 | 720 | < th | dose independent | sin | 18 | NA |
| 951 | 313.81 | temperature | 20 | 1440 | > th | dose dependent | rect. | 19 | 11 |
| 988 | 313.90 | temperature | 25 | 90 | < th | dose independent | rect. | 10 | 23 |