BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os09g0341500 Os09g0341500|AK073913
(304 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os09g0341500 Conserved hypothetical protein 580 e-166
Os09g0342000 Cyclin-like F-box domain containing protein 307 7e-84
Os09g0344300 303 7e-83
Os09g0324300 Cyclin-like F-box domain containing protein 256 2e-68
Os09g0324400 Cyclin-like F-box domain containing protein 236 1e-62
Os09g0324200 Cyclin-like F-box domain containing protein 225 3e-59
Os02g0274800 135 4e-32
Os09g0325000 Cyclin-like F-box domain containing protein 122 4e-28
Os09g0341600 Cyclin-like F-box domain containing protein 114 6e-26
Os09g0323200 111 7e-25
Os09g0344400 Cyclin-like F-box domain containing protein 103 1e-22
Os09g0337800 88 6e-18
>Os09g0341500 Conserved hypothetical protein
Length = 304
Score = 580 bits (1496), Expect = e-166, Method: Compositional matrix adjust.
Identities = 291/304 (95%), Positives = 291/304 (95%)
Query: 1 MKQRTGDGSPARRHCFTFPDIVVCEPLTRCHQGILCPPDLSGYQCXXXXXXXXXXXXXRI 60
MKQRTGDGSPARRHCFTFPDIVVCEPLTRCHQGILCPPDLSGYQC RI
Sbjct: 1 MKQRTGDGSPARRHCFTFPDIVVCEPLTRCHQGILCPPDLSGYQCLGVFLLDGDGDGGRI 60
Query: 61 GMSNFKVICALYDRYLLNYILPLSETLACTFTSGSGGGGWRLPHSTAAGGDVTLEHVRLD 120
GMSNFKVICALYDRYLLNYILPLSETLACTFTSGSGGGGWRLPHSTAAGGDVTLEHVRLD
Sbjct: 61 GMSNFKVICALYDRYLLNYILPLSETLACTFTSGSGGGGWRLPHSTAAGGDVTLEHVRLD 120
Query: 121 ATSFVGRANGRVYWEIEGDEGGDMLVLDETTAGFSLVTFPENVRESYDKRTFRIIAGGDG 180
ATSFVGRANGRVYWEIEGDEGGDMLVLDETTAGFSLVTFPENVRESYDKRTFRIIAGGDG
Sbjct: 121 ATSFVGRANGRVYWEIEGDEGGDMLVLDETTAGFSLVTFPENVRESYDKRTFRIIAGGDG 180
Query: 181 VAMRVVRVINNDLKVFAQLDGDGEWVLEKRVWLPAAARGLPGYDEGYFQEQNGEAIVVAA 240
VAMRVVRVINNDLKVFAQLDGDGEWVLEKRVWLPAAARGLPGYDEGYFQEQNGEAIVVAA
Sbjct: 181 VAMRVVRVINNDLKVFAQLDGDGEWVLEKRVWLPAAARGLPGYDEGYFQEQNGEAIVVAA 240
Query: 241 SAAYVLLTPPVEDTWLFSVELETMAVERWHERNKYAGVAYPCELPWPRALQATDADQISG 300
SAAYVLLTPPVEDTWLFSVELETMAVERWHERNKYAGVAYPCELPWPRALQATDADQISG
Sbjct: 241 SAAYVLLTPPVEDTWLFSVELETMAVERWHERNKYAGVAYPCELPWPRALQATDADQISG 300
Query: 301 RRRC 304
RRRC
Sbjct: 301 RRRC 304
>Os09g0342000 Cyclin-like F-box domain containing protein
Length = 450
Score = 307 bits (786), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 177/282 (62%), Positives = 199/282 (70%), Gaps = 11/282 (3%)
Query: 16 FTFPDIVVCEPLTRCHQGILCPPDLSGYQCX-XXXXXXXXXXXXRIGMSNFKVICALYDR 74
F F D++VCEPLTR +QGILCP D +GY+C I +SNF+V+CALYD
Sbjct: 170 FFFTDLIVCEPLTRRYQGILCPADFTGYRCIGVFLLDGGDDGGGDISLSNFRVLCALYDL 229
Query: 75 YLLNYILPLSETLACTFTSGSGGGGWRLPHSTAAGGDVTLEHVRLDATSFVGRANGRVYW 134
Y LN + AC F+SG GGGWRLP S A D+ L R +A SFVGRA G YW
Sbjct: 230 YWLNN-RHIGVQSACVFSSGRHGGGWRLPKS-AVADDIQLT-ARFNAMSFVGRAGGCFYW 286
Query: 135 EIEGDEG---GDMLVLDETTAGFSLVTFPENVRESYDKRTFRIIAGGDGVAMRVVRVINN 191
I+ D+ G MLVLDETT FSLVTFP+ +RE+Y TFRIIAGGDG AMRV+RVI N
Sbjct: 287 GIDDDDDEDDGAMLVLDETTTEFSLVTFPDIIRENYHMTTFRIIAGGDG-AMRVLRVIGN 345
Query: 192 DLKVFAQLDGDG-EWVLEKRVWLPAAARGLPGYDEGYFQEQNGEAIVVAASAAYVLLTPP 250
DLKVF QL G G EWVLEK V LP A RGLPG++E YF EQN EA++VAA AAYVLLTP
Sbjct: 346 DLKVFTQLAGSGVEWVLEKLVRLPEATRGLPGHEERYF-EQN-EAMIVAADAAYVLLTPS 403
Query: 251 VEDTWLFSVELETMAVERWHERNKYAGVAYPCELPWPRALQA 292
VE TWLFSVELETM VER HERNKYAGVAYP ELP RAL A
Sbjct: 404 VEKTWLFSVELETMTVERHHERNKYAGVAYPYELPLLRALHA 445
>Os09g0344300
Length = 356
Score = 303 bits (777), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 173/268 (64%), Positives = 195/268 (72%), Gaps = 9/268 (3%)
Query: 27 LTRCHQGILCPPDLSGYQCXXXXXXXXXXXXXRIGMSNFKVICALYDRYLLNYILPLSET 86
LTR +QGILCP D +GY+C I +SNF+VICALYD Y LN +
Sbjct: 93 LTRRYQGILCPADFTGYRCIGVFLLGGGGGGD-ISLSNFRVICALYDLYWLNN-RHIGVQ 150
Query: 87 LACTFTSGSGGGGWRLPHSTAAGGDVTLEHVRLDATSFVGRANGRVYWEIEGDEG--GDM 144
LAC F+SGS GGGWRLP S A D+ L R ++ SFVGRA G YW I+ D+ G M
Sbjct: 151 LACVFSSGSHGGGWRLPKS-AVADDIQLTE-RFNSISFVGRAGGCFYWGIDDDDDEDGAM 208
Query: 145 LVLDETTAGFSLVTFPENVRESYDKRTFRIIAGGDGVAMRVVRVINNDLKVFAQLDGDGE 204
LVLDETT FSLVTFP+++RE+Y TFRIIAGGDG AMRV+RVI NDLKVF QL GDGE
Sbjct: 209 LVLDETTTEFSLVTFPDSIRENYHMTTFRIIAGGDG-AMRVLRVIGNDLKVFTQLAGDGE 267
Query: 205 WVLEKRVWLPAAARGLPGYDEGYFQEQNGEAIVVAASAAYVLLTPPVEDTWLFSVELETM 264
WVLEK V LP A RGLPG++E YF EQN EA++VAA+AAYVLLTP VE TWLFSVELETM
Sbjct: 268 WVLEKLVRLPEATRGLPGHEERYF-EQN-EAMIVAANAAYVLLTPSVEKTWLFSVELETM 325
Query: 265 AVERWHERNKYAGVAYPCELPWPRALQA 292
VER HERNKYAGVAYP ELP RAL A
Sbjct: 326 VVERQHERNKYAGVAYPYELPLLRALHA 353
>Os09g0324300 Cyclin-like F-box domain containing protein
Length = 468
Score = 256 bits (653), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 155/284 (54%), Positives = 184/284 (64%), Gaps = 20/284 (7%)
Query: 16 FTFPDIVVCEPLTRCHQGILCP------PDLSGYQCXXXXXXXXXXXXXRIGMSNFKVIC 69
F+FPD+VVCEPLTR +QGI P L + IGMSNF+V+
Sbjct: 186 FSFPDLVVCEPLTRRYQGIASAVYFRRHPCLGVFLLDGDAADADDTGGGGIGMSNFRVVA 245
Query: 70 ALYDR-YLLNYILPLSETLACTFTSGSGGGGWRLPHSTAAGGDVTLEHVRLDATSFVGRA 128
AL+DR + + +PL AC FTSGS GG WR+ S AA V L R D +F GRA
Sbjct: 246 ALHDRTWQHDGAVPL----ACVFTSGSDGG-WRVLQSAAAAA-VDLPE-RFDFINFAGRA 298
Query: 129 NGRVYWEIEGDEGGDMLVLDETTAGFSLVTFPENVRESYDKRTFRIIAGGDGVAMRVVRV 188
G +YW I+G++G MLVLD T FS+ FPE +R SYDK TFR+I GG A+RVVRV
Sbjct: 299 GGCLYWGIDGEDGA-MLVLDVATMRFSIDMFPETIRASYDKWTFRVIDGG--YALRVVRV 355
Query: 189 INNDLKVFAQLDGDGEWVLEKRVWLPAAARGLPGYDEGYFQEQNGEAIVVAASAAYVLLT 248
+ NDLKVFAQL G GEWV+E+ V LP A R LPG E YF++ EA +VAA+AAYVLLT
Sbjct: 356 MRNDLKVFAQLAGSGEWVVERLVSLPEATRELPGRRETYFRQ---EAKIVAANAAYVLLT 412
Query: 249 PPVEDTWLFSVELETMAVERWHERNKYAGVAYPCELPWPRALQA 292
P + WLFSVELET VER HERN+YAG AY ELPWP ALQA
Sbjct: 413 PQEKKRWLFSVELETGKVERRHERNRYAGAAYSYELPWPPALQA 456
>Os09g0324400 Cyclin-like F-box domain containing protein
Length = 429
Score = 236 bits (603), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 147/291 (50%), Positives = 184/291 (63%), Gaps = 12/291 (4%)
Query: 2 KQRTGDGSPARRHCFTFPDIVVCEPLTRCHQGILCPPDLSGYQCXXXXXXXXXXXXXRIG 61
+ R G + +RR F D+VVCEPLTR +Q I CP +L + C G
Sbjct: 145 RPRFGGVATSRR----FTDLVVCEPLTRRYQVIRCPANLKFFMCLGVFLLDDDAATG--G 198
Query: 62 MSNFKVICALYDRYLLNYILPLSETLACTFTSGSGGGGWRLPHSTAAGGDVTLEHVRLDA 121
+SNF+VI L+D + + ++ + + G G W++ DV L H ++
Sbjct: 199 VSNFRVIAVLFDHHRWLDYRGMPMSMMFSSSGSGGDGTWQVVQWETID-DVDLPH-WIEH 256
Query: 122 TSFVGRANGRVYWEIEGDEGGDMLVLDETTAGFSLVTFPENVRESYDKRTFRIIAGGDGV 181
+FVGRANGR+YW I+ +E G LVLDE+T F++ FPENV YDK TFR+I GD
Sbjct: 257 ITFVGRANGRIYWGID-NEDGATLVLDESTTEFAITMFPENVWAPYDKYTFRVIGDGDDG 315
Query: 182 AMRVVRVINNDLKVFAQLDGDGEWVLEKRVWLPAAARGLPGYDEGYFQEQNGEAIVVAAS 241
A+RVVRVINNDLKVF QL G GEWVLEK V LP A RGLPG +EG F Q+GEA++VAAS
Sbjct: 316 ALRVVRVINNDLKVFTQLAGGGEWVLEKTVSLPEATRGLPGREEGLFF-QHGEAMIVAAS 374
Query: 242 AAYVLLTPPVEDTWLFSVELETMAVERWHERNKYAGVAYPCE-LPWPRALQ 291
AAYVL+TP E W+FSVEL+TM VER H+RN Y G AY E LPWP ALQ
Sbjct: 375 AAYVLVTPR-EKAWMFSVELDTMEVEREHDRNWYPGPAYQYESLPWPPALQ 424
>Os09g0324200 Cyclin-like F-box domain containing protein
Length = 441
Score = 225 bits (574), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 145/299 (48%), Positives = 178/299 (59%), Gaps = 29/299 (9%)
Query: 17 TFPDIVVCEPLTRCHQGILCPPDLSG-----YQCXXXXXXXXXXXXXRIGMSNFKVICAL 71
+FPD+VVCEPLTR HQGIL P +++ + I MSNF+V+ A+
Sbjct: 157 SFPDMVVCEPLTRRHQGILRPQEMNSPYRICFGVFLIDGAAADETGGCISMSNFRVLSAV 216
Query: 72 YDR------YLLNYILPLSETLACTFTSGSGGGGWRLPHSTAAGGDVTLEHVRLDATSFV 125
Y+ Y + P A F+SG GG WR + +G DV L + L +FV
Sbjct: 217 YEPETPYCGYWHGHGTP-PRPRAYVFSSGVDGG-WR---ESDSGSDVELPSLEL--INFV 269
Query: 126 GRANGRVYWEIEGDEGGDMLVLDETTAGFSLVTFPENVRESYDKRTFRIIAGGDGVAMRV 185
GRA +YW ++G + ML L +TTA FSLVT P V ESY TFR+I GGD MRV
Sbjct: 270 GRAGCSLYWGLDGKDA--MLALHKTTAEFSLVTIPAIVGESYHPSTFRVIGGGDDGTMRV 327
Query: 186 VRVINNDLKVFAQLDGD-GEWVLEKRVWLPAAARGLPGYDEGYFQEQNGEAIVVAASAAY 244
VR+I +DLK+F QL G GEWV+EK V LP A RGLPG+D G F A +V A+ Y
Sbjct: 328 VRLIGDDLKIFTQLKGSGGEWVVEKLVRLPVATRGLPGHDVGLFHHY---ARIVTANERY 384
Query: 245 VLLTPPVEDTWLFSVELETMAVERWHERNKYAGVAYPCELPWPRALQATDADQISGRRR 303
+L+TP V TWLFSVE+ET VER H RNKYAG AYP ELPWP LQA I+GRRR
Sbjct: 385 ILVTPRVA-TWLFSVEVETPVVEREHVRNKYAGAAYPYELPWPPVLQAC----IAGRRR 438
>Os02g0274800
Length = 256
Score = 135 bits (340), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 95/226 (42%), Positives = 127/226 (56%), Gaps = 22/226 (9%)
Query: 62 MSNFKVICALYDRYLLNYILPLSETLACTFTSGSGGGGWRLPHSTAAGGDVTLEHVRL-D 120
MSN++V+C + LAC F+ G+ GG WR + GD E V +
Sbjct: 27 MSNYRVLCMFGE-------------LACVFSPGNDGG-WRFVDTGLKYGDG--EDVEFPE 70
Query: 121 ATSFVGRANGRVYWEIEGDEGGDMLVLDETTAGFSLVTFPENVRESYDKRTFRIIAGGDG 180
T FVGRA G++YW G G + V DE T F L+ FP+++R Y K R+I G DG
Sbjct: 71 DTQFVGRAAGKIYWWAPG---GLVQVFDEATDTFFLMEFPKHMRWEYHKSNLRVIGGVDG 127
Query: 181 VAMRVVRVINNDLKVFAQLDGDGEWVLEKRVWLPAAARGLPGYDEGYFQEQNGEA-IVVA 239
+RVVR+ DL+++ + G GEW +E+ V L A RGLPG E +F + A IV A
Sbjct: 128 GGIRVVRMTGEDLEIYGE-SGGGEWAVERSVRLAEATRGLPGRQEVFFTAEAPAARIVTA 186
Query: 240 ASAAYVLLTPPVEDTWLFSVELETMAVERWHERNKYAGVAYPCELP 285
+V L P ++TWLFSV+LETM ER HERNK+ G A+PC P
Sbjct: 187 GGDGFVTLAPAEDETWLFSVDLETMEAERDHERNKHVGEAHPCSAP 232
>Os09g0325000 Cyclin-like F-box domain containing protein
Length = 429
Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 97/296 (32%), Positives = 133/296 (44%), Gaps = 38/296 (12%)
Query: 18 FPDIVVCEPLTRCHQGILCPPDLSGYQCXXXXXXXXXXXXXRIGMSNFKVICALYD---- 73
FP+++VC+PL R H I PD C +S+F + C L++
Sbjct: 132 FPELIVCDPLARRHVVIPPIPDKKYSHCLAVFFWNWNGGP---NLSDFTLRCVLHEGIDG 188
Query: 74 -----------RYLLNYILPLSETLACTFTSGSGGGGWRLPHSTAAGGDVTLEHVRLDAT 122
+ +Y + L F G A D H+R
Sbjct: 189 AAGGVTTARVYDFKRHYWSHHRKYLDRWFARG------------GAIDDGDGVHLRGATL 236
Query: 123 SFVGRANGRVYWEIEGDEGGDMLVLD---ETTAGFSLVTFPENVR--ESYDKRTFRIIAG 177
GRA +++ + D +L LD + F L P ++R D+ FR I G
Sbjct: 237 HLTGRAACWIFFGNDADADA-VLALDMRYPSACKFMLARVPGSLRGGSCGDRSGFRFIDG 295
Query: 178 GDGVAMRVVRVINNDLKVFAQLDGDGE-WVLEKRVWLPAAARGLPGYDEGYFQEQNGEAI 236
+ +R+V V+ DLKVF + DG G+ W EK + L A G+PG E YF A
Sbjct: 296 DNPDDVRLVSVVGGDLKVFLRRDGSGDAWEPEKNLSLRDATSGMPGRKESYFGGAGAAAK 355
Query: 237 VVAASAAYVLLTPPVEDTWLFSVELETMAVERWHERNKYAGVAYPCELPWPRALQA 292
+V+A A YV+LTP E+TWLFSVEL TM VER H RN+YAG +P PWP L A
Sbjct: 356 IVSAGAGYVVLTP-AEETWLFSVELATMEVERKHSRNRYAGEFFPYHPPWPPTLSA 410
>Os09g0341600 Cyclin-like F-box domain containing protein
Length = 467
Score = 114 bits (286), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 97/297 (32%), Positives = 130/297 (43%), Gaps = 40/297 (13%)
Query: 18 FPDIVVCEPLTRCHQGILCPPDLSGYQCXXXXXXXXXXXXXRIGMSNFKVICALYDRYLL 77
FPD+VVCEP+TR H+ ++ ++ Y MSNFKV C +Y Y
Sbjct: 174 FPDLVVCEPVTRRHK-VIPRMEVMKYHHCVGVFLLDFDRNGSFSMSNFKVTCVVYQPYF- 231
Query: 78 NYILPLSETLACTFTSGSGGGGWRLPHSTAAGGD----------VTLEHVRL-------- 119
+ C + W D V + H+R
Sbjct: 232 GVSGDVGTITVCEYMEDM----WDWTRHMKPDEDDEVPKLFEWYVVVTHLRTRPGIHLHD 287
Query: 120 -DATSFVGRANGRVYWEIEGDEGGDMLVLDETTAGFSLVTFPENVRESYDKRTFRIIAGG 178
D+ F+G A G ++W I+ DEG +L+LDE ++ P VR S R I G
Sbjct: 288 RDSLRFLGHAGGSIFWAIKEDEGS-LLILDENGIDPHILRTPAGVRGS----ELRAIVDG 342
Query: 179 DG--VAMRVVRVINNDLKVFAQLDGDGEWVLEKRVWLPAAARGLPGYDEGYFQEQNGEAI 236
+G +RVV + L+V L E VLEK + L A R L GY E F G
Sbjct: 343 NGDRHNVRVVVLEGETLRVVTWLCDTDELVLEKSLHLVEATRRLQGYKESCF---CGGVD 399
Query: 237 VVAASAAYVLLTPPVEDT-WLFSVELETMAVERWHERNKYAGVAYPCELPWPRALQA 292
+V S + ++TP E T W+ S++LETM V KYA VAYPCELPWP L A
Sbjct: 400 IVTVSTSCAVVTPVEEKTTWMVSIDLETMEVTE----CKYASVAYPCELPWPPTLSA 452
>Os09g0323200
Length = 423
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 97/305 (31%), Positives = 130/305 (42%), Gaps = 42/305 (13%)
Query: 16 FTFPDIVVCEPLTRCHQGILCPPDLSG----YQCXXXXXXXX--XXXXXRIGMSNFKVIC 69
F FP++VVCEPLTR H+ IL PD Y C IGMSNF+V+
Sbjct: 136 FCFPEVVVCEPLTRRHRRILPSPDFGTGCFFYGCYLADGEAAGDSSSSSSIGMSNFRVVY 195
Query: 70 ALYDRYLLNYILPLSETLACTFTSGSGGGGWRLPHSTAAGGDVTLEHVRLDATSFVGRAN 129
LY + + A + S WR T+ G + H S +GRA
Sbjct: 196 ELYRDDGGAGLARAAVFAAGAAGAHS----WR---ETSVGHAIPPFH----RMSLMGRAG 244
Query: 130 GRVYWEIEGDEGGDMLVLDETTAGFSLVTFPENVRESYDKRTFRIIAGGDG--------- 180
G Y+ EG M VLD +TA FS F + + I G DG
Sbjct: 245 GSWYFH----EGSTMAVLDGSTAEFSSSPFTLQQQPIHPGVYLYIAEGRDGEPRMFTTTG 300
Query: 181 -VAMRVVRVINNDLKVFAQLDGDGEWVLEKRVWLPAAARGLPGYDEGYFQEQNGEAIVVA 239
+ +++ V D EW +EK V L A RGLPGYD +F G V+
Sbjct: 301 GILTVLIKRARRPAVVAGGEDDVEEWAVEKSVRLSEATRGLPGYDASFFGGGGGPMDVIT 360
Query: 240 ASAAYVLLTPPVEDT---------WLFSVELETMAVERWHERNKYAGVAYPCELPWPRAL 290
+V+L+P + T W F+V+LET VER H + + +PC+LPWP L
Sbjct: 361 RGVGFVVLSPRIRTTKEEAAAPARWWFAVDLETAEVERVH--DDLGTIQFPCQLPWPPNL 418
Query: 291 QATDA 295
+A A
Sbjct: 419 RACPA 423
>Os09g0344400 Cyclin-like F-box domain containing protein
Length = 450
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 95/299 (31%), Positives = 136/299 (45%), Gaps = 42/299 (14%)
Query: 18 FPDIVVCEPLTRCHQGILCPPDLSGYQCX---XXXXXXXXXXXXRIGMSNFKVICALYDR 74
FPD+VVCEP+TR ++ I ++ +C MS+ +VIC +Y
Sbjct: 148 FPDLVVCEPVTRRYKLIPRMEEMKHQRCLGVFLQSYPTSSTSNRSSIMSSLRVICVVYIE 207
Query: 75 YLLNYILPLSETLACTFTSGSGGGGWR-----------LPHSTAAGGDVTL---EHVRLD 120
Y + AC F +G W+ P A + L EH RL
Sbjct: 208 YS-GVSDGMGTVRACVFDP-NGSNSWKPRPRSACWYMFKPSWNMAKHGIHLRGSEHARL- 264
Query: 121 ATSFVGRANGRVYWEIEGDEGGDMLVLDETTAGFSLVTFPENVRESYDKRTFRIIAGGDG 180
+G A G V+W + GD+ +LVLD+ F ++ P +VR S + I+ GG+G
Sbjct: 265 ----LGHAAGAVFWAVGGDD--TLLVLDKWRTEFEVLRLPGSVRASGLRA---IVDGGNG 315
Query: 181 VAMRVVRVI----NNDLKVFAQLDG---DGEWVLEKRVWLPAAARGLPGYDEGYFQEQNG 233
+RV+ N ++VFA G +GEWVL+K + L + GL GY G
Sbjct: 316 DNDGKLRVVCLDEENVVRVFATWRGQHSNGEWVLQKSLRLEESTMGLAGYKAGRGGAAMV 375
Query: 234 EAIVVAASAAYVLLTPPVEDTWLFSVELETMAVERWHERNKYAGVAYPCELPWPRALQA 292
A A S V+L P TW+FSV+LETM + E + + YPCELPW L+A
Sbjct: 376 VAAATAGS---VVLAPVEGMTWMFSVDLETMEIA---ECKEVSVAVYPCELPWRPTLRA 428
>Os09g0337800
Length = 434
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 93/303 (30%), Positives = 129/303 (42%), Gaps = 44/303 (14%)
Query: 20 DIVVCEPLTRCHQGILCPPDLSGYQCXXXXXXXXXXXXXR--------IGMSNFKVICAL 71
IVVCEP TR ++ ++ P + C + G+SNF V+
Sbjct: 135 SIVVCEPWTRRYRTVIPPLENKHVACLDASLLGAGTGSEKKNNNNNHVAGVSNFTVL--- 191
Query: 72 YDRYLLNYILPLSETLACTFTSGSGGGG---WRLPHSTAAGGDVTLE-------HVRLDA 121
L+ Y AC F++ +G RL S G + + H DA
Sbjct: 192 ----LILYTFGSGAKTACIFSTFTGADEELRLRLTRSMDLGDLIRPKGVPRRQRHFDADA 247
Query: 122 TSFVGRANGRVYWEIEGDEGGDMLVLDETTAGFSLVTFP-----ENVRESYDKRTFRIIA 176
F GRA G +YW G G + LDE+T S +T P E R Y + R +
Sbjct: 248 MHFAGRAGGSLYW---GTIYGVVFALDESTGELSPLTLPKCCASEQPRFYYRQWNLRAV- 303
Query: 177 GGDGVAMRVVRVI-NNDLKVFAQLDGDG--EWVLEKRVWLPA-AARGLPGY-DEGYFQEQ 231
G D R+VRV+ ++DL+V L G EW +EK + LP RGLP D E+
Sbjct: 304 GDDAGGGRLVRVVQHSDLEVLTPLHAGGGREWTVEKTLRLPELITRGLPELEDYSRLVER 363
Query: 232 NGEAIVVAASAAYVLLTPPV-EDTWLFSVELETMAVER---WHERNKYAGVAYPCELPWP 287
++ V+LTPP W FSV+LETM +E W + V +P + PWP
Sbjct: 364 LTGVKILEVMGRSVVLTPPEGSGMWPFSVDLETMELEHVYDWGDELVQKWV-FPVKPPWP 422
Query: 288 RAL 290
AL
Sbjct: 423 PAL 425
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.322 0.139 0.446
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 12,181,427
Number of extensions: 559761
Number of successful extensions: 1703
Number of sequences better than 1.0e-10: 13
Number of HSP's gapped: 1654
Number of HSP's successfully gapped: 13
Length of query: 304
Length of database: 17,035,801
Length adjustment: 100
Effective length of query: 204
Effective length of database: 11,814,401
Effective search space: 2410137804
Effective search space used: 2410137804
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 156 (64.7 bits)