Os09g0341500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os09g0341500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 214.86 | 0.689 | 3.37 | 0.00524 | 0.327 | 1.72 | 1 | -0.93 | 0.669 | 20.4 | 5.002 | 318 | -- | -- |
| 215.08 | 0.683 | 3.38 | 0.0269 | 0.317 | 1.95 | 0.973 | -- | 0.665 | 20.5 | 5.036 | 323 | -- | -- |
| 217.88 | 0.687 | 3.38 | -0.0237 | 0.337 | 1.74 | -- | -0.446 | 0.667 | 20 | 5.059 | 318 | -- | -- |
| 217.92 | 0.688 | 3.38 | -0.0225 | 0.355 | 1.89 | -- | -- | 0.667 | 19.9 | 5.3 | 318 | -- | -- |
| 222.16 | 0.694 | 3.37 | 0.0203 | -- | 1.78 | -- | -0.193 | 0.653 | -- | 4.175 | 323 | -- | -- |
| 242.11 | 0.729 | 3.4 | -0.307 | 0.59 | -- | 0.266 | -- | 0.608 | 19.1 | -- | -- | -- | -- |
| 242.26 | 0.729 | 3.4 | -0.311 | 0.593 | -- | -- | -- | 0.609 | 19 | -- | -- | -- | -- |
| 222.13 | 0.694 | 3.38 | 0.0211 | -- | 1.83 | -- | -- | 0.645 | -- | 4.216 | 323 | -- | -- |
| 217.93 | 0.688 | 3.38 | -- | 0.35 | 1.9 | -- | -- | 0.668 | 19.9 | 5.3 | 318 | -- | -- |
| 260.73 | 0.755 | 3.39 | -0.323 | -- | -- | -- | -- | 0.598 | -- | -- | -- | -- | -- |
| 244.81 | 0.732 | 3.4 | -- | 0.597 | -- | -- | -- | 0.644 | 18.9 | -- | -- | -- | -- |
| 222.14 | 0.694 | 3.38 | -- | -- | 1.83 | -- | -- | 0.643 | -- | 4.215 | 323 | -- | -- |
| 263.49 | 0.758 | 3.38 | -- | -- | -- | -- | -- | 0.634 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 205.78 | wind | 7.0 | 90 | > th | dose dependent | sin | 11 | NA |
| 4 | 208.41 | wind | 7.0 | 90 | < th | dose independent | sin | 11 | NA |
| 5 | 208.69 | wind | 7.0 | 90 | > th | dose independent | sin | 11 | NA |
| 11 | 209.84 | wind | 7.0 | 90 | > th | dose dependent | rect. | 17 | 18 |
| 21 | 211.22 | wind | 7.0 | 90 | > th | dose independent | rect. | 16 | 19 |
| 32 | 212.04 | wind | 5.0 | 270 | > th | dose dependent | rect. | 13 | 22 |
| 33 | 212.11 | wind | 5.0 | 90 | > th | dose dependent | sin | 15 | NA |
| 44 | 212.81 | wind | 7.0 | 90 | > th | dose dependent | rect. | 17 | 15 |
| 47 | 212.91 | wind | 7.0 | 90 | > th | dose independent | rect. | 17 | 15 |
| 48 | 212.98 | wind | 7.0 | 90 | > th | dose dependent | rect. | 17 | 12 |
| 56 | 213.34 | wind | 7.0 | 90 | > th | dose independent | rect. | 17 | 11 |
| 71 | 213.75 | wind | 7.0 | 720 | < th | dose independent | rect. | 10 | 14 |
| 81 | 214.09 | wind | 9.0 | 720 | < th | dose independent | sin | 9 | NA |
| 91 | 214.47 | wind | 7.0 | 90 | > th | dose dependent | rect. | 17 | 6 |
| 106 | 214.71 | wind | 5.0 | 90 | > th | dose dependent | rect. | 11 | 21 |
| 108 | 214.77 | wind | 7.0 | 90 | > th | dose independent | rect. | 17 | 6 |
| 109 | 214.78 | wind | 7.0 | 720 | < th | dose independent | rect. | 18 | 22 |
| 134 | 215.20 | wind | 5.0 | 90 | > th | dose dependent | rect. | 11 | 17 |
| 138 | 215.22 | wind | 5.0 | 90 | > th | dose dependent | rect. | 16 | 23 |
| 143 | 215.27 | wind | 7.0 | 90 | > th | dose independent | rect. | 11 | 21 |
| 154 | 215.37 | wind | 7.0 | 720 | < th | dose independent | rect. | 10 | 21 |
| 167 | 215.50 | wind | 7.0 | 90 | > th | dose independent | rect. | 11 | 18 |
| 193 | 215.76 | wind | 5.0 | 270 | > th | dose dependent | no | NA | NA |
| 194 | 215.76 | wind | 5.0 | 270 | > th | dose dependent | rect. | 6 | 23 |
| 195 | 215.78 | wind | 9.0 | 720 | > th | dose independent | rect. | 17 | 19 |
| 199 | 215.80 | wind | 5.0 | 270 | > th | dose dependent | rect. | 3 | 23 |
| 206 | 215.87 | wind | 5.0 | 270 | > th | dose dependent | rect. | 24 | 23 |
| 213 | 215.92 | wind | 5.0 | 270 | > th | dose dependent | rect. | 19 | 23 |
| 223 | 216.00 | wind | 9.0 | 720 | > th | dose independent | sin | 8 | NA |
| 237 | 216.10 | wind | 9.0 | 720 | < th | dose independent | sin | 21 | NA |
| 331 | 216.80 | wind | 5.0 | 270 | > th | dose dependent | rect. | 13 | 16 |
| 353 | 216.92 | wind | 7.0 | 720 | > th | dose dependent | rect. | 20 | 21 |
| 370 | 217.02 | wind | 9.0 | 720 | < th | dose independent | sin | 4 | NA |
| 371 | 217.02 | wind | 7.0 | 270 | < th | dose independent | rect. | 15 | 23 |
| 398 | 217.11 | wind | 7.0 | 720 | < th | dose independent | rect. | 12 | 10 |
| 422 | 217.20 | wind | 7.0 | 720 | < th | dose independent | rect. | 4 | 20 |
| 448 | 217.29 | wind | 7.0 | 270 | > th | dose independent | no | NA | NA |
| 449 | 217.29 | wind | 7.0 | 270 | > th | dose independent | rect. | 7 | 22 |
| 452 | 217.29 | wind | 7.0 | 90 | > th | dose independent | rect. | 16 | 23 |
| 458 | 217.31 | wind | 7.0 | 270 | > th | dose independent | rect. | 24 | 23 |
| 464 | 217.33 | wind | 7.0 | 720 | < th | dose independent | rect. | 4 | 18 |
| 468 | 217.36 | wind | 7.0 | 270 | < th | dose independent | no | NA | NA |
| 470 | 217.37 | wind | 7.0 | 270 | > th | dose independent | rect. | 3 | 23 |
| 482 | 217.41 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 2 | 17 |
| 497 | 217.46 | wind | 9.0 | 720 | > th | dose independent | rect. | 19 | 18 |
| 526 | 217.53 | wind | 7.0 | 270 | > th | dose independent | rect. | 19 | 23 |
| 531 | 217.54 | wind | 9.0 | 720 | > th | dose dependent | rect. | 19 | 18 |
| 549 | 217.60 | wind | 7.0 | 720 | > th | dose dependent | rect. | 9 | 9 |
| 573 | 217.68 | wind | 7.0 | 720 | > th | dose dependent | rect. | 24 | 18 |
| 578 | 217.69 | wind | 9.0 | 720 | > th | dose dependent | sin | 2 | NA |
| 598 | 217.77 | wind | 9.0 | 720 | > th | dose independent | sin | 4 | NA |
| 624 | 217.80 | wind | 9.0 | 720 | > th | dose independent | rect. | 20 | 21 |
| 802 | 218.17 | wind | 7.0 | 720 | < th | dose independent | rect. | 2 | 22 |
| 877 | 218.30 | wind | 9.0 | 720 | > th | dose dependent | no | NA | NA |