BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os09g0324200 Os09g0324200|AK109621
(441 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os09g0324200 Cyclin-like F-box domain containing protein 792 0.0
Os09g0324300 Cyclin-like F-box domain containing protein 308 7e-84
Os09g0342000 Cyclin-like F-box domain containing protein 305 6e-83
Os09g0324400 Cyclin-like F-box domain containing protein 286 3e-77
Os09g0344300 237 1e-62
Os09g0341500 Conserved hypothetical protein 227 1e-59
Os09g0325000 Cyclin-like F-box domain containing protein 184 2e-46
Os09g0323200 161 8e-40
Os09g0344400 Cyclin-like F-box domain containing protein 155 5e-38
Os09g0341600 Cyclin-like F-box domain containing protein 153 3e-37
Os09g0337800 130 2e-30
Os09g0323400 122 5e-28
Os02g0274800 115 5e-26
Os09g0324100 80 3e-15
Os10g0183700 80 3e-15
Os09g0325650 74 2e-13
>Os09g0324200 Cyclin-like F-box domain containing protein
Length = 441
Score = 792 bits (2046), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/441 (90%), Positives = 397/441 (90%)
Query: 1 MAGTEXXXXXXXXXXXXXXXKEAATAGPTSVNDVPDXXXXXXXXXXXXXXXXXXXXXXXX 60
MAGTE KEAATAGPTSVNDVPD
Sbjct: 1 MAGTERSRRRREVKLRKAWRKEAATAGPTSVNDVPDEVLELVLLRLGDSLALLRAAAACK 60
Query: 61 XXXXXVADAGFLARFRSLHEPHVVGHYHVVDPTFAGALRGGNHVFVPERSPSPADALDRR 120
VADAGFLARFRSLHEPHVVGHYHVVDPTFAGALRGGNHVFVPERSPSPADALDRR
Sbjct: 61 RWRRLVADAGFLARFRSLHEPHVVGHYHVVDPTFAGALRGGNHVFVPERSPSPADALDRR 120
Query: 121 RLSLDFLPEPDGDRAWWKLADTRGGLVLLYPKTWNASFPDMVVCEPLTRRHQGILRPQEM 180
RLSLDFLPEPDGDRAWWKLADTRGGLVLLYPKTWNASFPDMVVCEPLTRRHQGILRPQEM
Sbjct: 121 RLSLDFLPEPDGDRAWWKLADTRGGLVLLYPKTWNASFPDMVVCEPLTRRHQGILRPQEM 180
Query: 181 NSPYRICFGVFLIDGAAADETGGCISMSNFRVLSAVYEPETPYCGYWHGHGTPPRPRAYV 240
NSPYRICFGVFLIDGAAADETGGCISMSNFRVLSAVYEPETPYCGYWHGHGTPPRPRAYV
Sbjct: 181 NSPYRICFGVFLIDGAAADETGGCISMSNFRVLSAVYEPETPYCGYWHGHGTPPRPRAYV 240
Query: 241 FSSGVDGGWRESDSGSDVELPSLELINFVGRAGCSLYWGLDGKDAMLALHKTTAEFSLVT 300
FSSGVDGGWRESDSGSDVELPSLELINFVGRAGCSLYWGLDGKDAMLALHKTTAEFSLVT
Sbjct: 241 FSSGVDGGWRESDSGSDVELPSLELINFVGRAGCSLYWGLDGKDAMLALHKTTAEFSLVT 300
Query: 301 IPAIVGESYHPSTFRVIGGGDDGTMRVVRLIGDDLKIFTQLKGSGGEWVVEKLVRLPVAT 360
IPAIVGESYHPSTFRVIGGGDDGTMRVVRLIGDDLKIFTQLKGSGGEWVVEKLVRLPVAT
Sbjct: 301 IPAIVGESYHPSTFRVIGGGDDGTMRVVRLIGDDLKIFTQLKGSGGEWVVEKLVRLPVAT 360
Query: 361 RGLPGHDVGLFHHYARIVTANERYILVTPRVATWLFSVEVETPVVEREHVRNKYAGAAYP 420
RGLPGHDVGLFHHYARIVTANERYILVTPRVATWLFSVEVETPVVEREHVRNKYAGAAYP
Sbjct: 361 RGLPGHDVGLFHHYARIVTANERYILVTPRVATWLFSVEVETPVVEREHVRNKYAGAAYP 420
Query: 421 YELPWPPVLQACIAGRRRSRR 441
YELPWPPVLQACIAGRRRSRR
Sbjct: 421 YELPWPPVLQACIAGRRRSRR 441
>Os09g0324300 Cyclin-like F-box domain containing protein
Length = 468
Score = 308 bits (788), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 205/428 (47%), Positives = 245/428 (57%), Gaps = 39/428 (9%)
Query: 29 TSVNDVPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVADAGFLARFRSLH-EPHVVGHY 87
T+V DVPD VADAGFL FRSLH HV G Y
Sbjct: 45 TTVEDVPDHLLEVILLRLDSSVSLLRAAAACTRWRRVVADAGFLRSFRSLHGARHVAGRY 104
Query: 88 HVVDPTFAG--ALRGGNHVFVPERSPSPADALDRRRLSLDFLPEPDGDRAW-WKLADTRG 144
H VDP+F + G + VFVP S P + R SLDFLP+ D +W W+L D+RG
Sbjct: 105 HTVDPSFGWPPSAGGSSVVFVP--SSPPVIGVASRFFSLDFLPDYDDGNSWSWELVDSRG 162
Query: 145 GLVLLYPKT-----WNA-------SFPDMVVCEPLTRRHQGILRPQEMNSPYRICFGVFL 192
GL+L K W A SFPD+VVCEPLTRR+QGI C GVFL
Sbjct: 163 GLLLFSKKRKSTGRWAAMADARGFSFPDLVVCEPLTRRYQGIASAVYFRR--HPCLGVFL 220
Query: 193 IDGAAADETGGC---ISMSNFRVLSAVYEPETPYCGYWHGHGTPPRPRAYVFSSGVDGGW 249
+DG AAD I MSNFRV++A+++ W G P A VF+SG DGGW
Sbjct: 221 LDGDAADADDTGGGGIGMSNFRVVAALHDRT------WQHDGAVPL--ACVFTSGSDGGW 272
Query: 250 R--ESDSGSDVELPS-LELINFVGRAGCSLYWGLDGKD-AMLALHKTTAEFSLVTIPAIV 305
R +S + + V+LP + INF GRAG LYWG+DG+D AML L T FS+ P +
Sbjct: 273 RVLQSAAAAAVDLPERFDFINFAGRAGGCLYWGIDGEDGAMLVLDVATMRFSIDMFPETI 332
Query: 306 GESYHPSTFRVIGGGDDGTMRVVRLIGDDLKIFTQLKGSGGEWVVEKLVRLPVATRGLPG 365
SY TFRVI GG +RVVR++ +DLK+F QL GSG EWVVE+LV LP ATR LPG
Sbjct: 333 RASYDKWTFRVIDGG--YALRVVRVMRNDLKVFAQLAGSG-EWVVERLVSLPEATRELPG 389
Query: 366 HDVGLFHHYARIVTANERYILVTPRVAT-WLFSVEVETPVVEREHVRNKYAGAAYPYELP 424
F A+IV AN Y+L+TP+ WLFSVE+ET VER H RN+YAGAAY YELP
Sbjct: 390 RRETYFRQEAKIVAANAAYVLLTPQEKKRWLFSVELETGKVERRHERNRYAGAAYSYELP 449
Query: 425 WPPVLQAC 432
WPP LQAC
Sbjct: 450 WPPALQAC 457
>Os09g0342000 Cyclin-like F-box domain containing protein
Length = 450
Score = 305 bits (780), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 212/443 (47%), Positives = 253/443 (57%), Gaps = 41/443 (9%)
Query: 22 EAATAGPTSVNDVPDXXXXXXXXXXX-XXXXXXXXXXXXXXXXXXVADAGFLARFRSLHE 80
+A A TSV+DVPD V AGFL FR+LH
Sbjct: 23 KAVPAAATSVDDVPDHLLEDILLRLGPSSACLVRAAYACKRWRRVVTAAGFLDAFRALHG 82
Query: 81 PH---VVGHYHVVDPTFAGALRGGNHVFVPERSPSPADALDRRRLSLDFLPEPDGDRAWW 137
H V G+YH VD +A AL GG S S A R SLDFLP D W
Sbjct: 83 AHHHRVAGYYHTVDAYYAPALPGGESSVFVPSSSSLAGVDGRLWFSLDFLPASDDFS--W 140
Query: 138 KLADTRGGLVLL-----------YPKTWNASFPDMVVCEPLTRRHQGILRPQEMNSPYRI 186
+LAD+RGGL+LL Y + F D++VCEPLTRR+QGIL P + YR
Sbjct: 141 ELADSRGGLLLLSKKRRTHTRSGYAAEGDFFFTDLIVCEPLTRRYQGILCPADFTG-YR- 198
Query: 187 CFGVFLIDGAAADETGGCISMSNFRVLSAVYEPETPYCGYWHGHGTPPRPRAYVFSSGVD 246
C GVFL+DG IS+SNFRVL A+Y+ YW + A VFSSG
Sbjct: 199 CIGVFLLDGGDDGGGD--ISLSNFRVLCALYDL------YWLNNRHIGVQSACVFSSGRH 250
Query: 247 -GGWR--ESDSGSDVELPS-LELINFVGRAGCSLYWGLDGKD-----AMLALHKTTAEFS 297
GGWR +S D++L + ++FVGRAG YWG+D D AML L +TT EFS
Sbjct: 251 GGGWRLPKSAVADDIQLTARFNAMSFVGRAGGCFYWGIDDDDDEDDGAMLVLDETTTEFS 310
Query: 298 LVTIPAIVGESYHPSTFRVIGGGDDGTMRVVRLIGDDLKIFTQLKGSGGEWVVEKLVRLP 357
LVT P I+ E+YH +TFR+I GG DG MRV+R+IG+DLK+FTQL GSG EWV+EKLVRLP
Sbjct: 311 LVTFPDIIRENYHMTTFRIIAGG-DGAMRVLRVIGNDLKVFTQLAGSGVEWVLEKLVRLP 369
Query: 358 VATRGLPGHDVGLF-HHYARIVTANERYILVTPRV-ATWLFSVEVETPVVEREHVRNKYA 415
ATRGLPGH+ F + A IV A+ Y+L+TP V TWLFSVE+ET VER H RNKYA
Sbjct: 370 EATRGLPGHEERYFEQNEAMIVAADAAYVLLTPSVEKTWLFSVELETMTVERHHERNKYA 429
Query: 416 GAAYPYELPWPPVLQACIAGRRR 438
G AYPYELP L A GR R
Sbjct: 430 GVAYPYELPLLRALHA--GGRYR 450
>Os09g0324400 Cyclin-like F-box domain containing protein
Length = 429
Score = 286 bits (731), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 195/421 (46%), Positives = 239/421 (56%), Gaps = 32/421 (7%)
Query: 30 SVNDVPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVADAGFLARFRSLHEPH-VVGHYH 88
+V DVPD VADA FL FR+LH H V G Y
Sbjct: 26 TVQDVPDHVLEMILLRVDSSACLVRAAASCRRWRRVVADAAFLHSFRTLHGAHRVAGVYR 85
Query: 89 VVDPTFAGALRGGNHVFVPERSPSPADALDRRRLSLDFLPEPDGDRAWWKLADTRGGLVL 148
VDP + L GGN VFVP +P A D +LDFLP G R W+L D RGGL+L
Sbjct: 86 TVDPAYGRPLPGGNFVFVPS---TPLAAGDSCCFALDFLPY--GGRNSWELLDCRGGLLL 140
Query: 149 LYPK-------TWNASFPDMVVCEPLTRRHQGILRPQEMNSPYRICFGVFLIDGAAADET 201
L K + F D+VVCEPLTRR+Q I P N + +C GVFL+D AA T
Sbjct: 141 LSKKRPRFGGVATSRRFTDLVVCEPLTRRYQVIRCPA--NLKFFMCLGVFLLDDDAA--T 196
Query: 202 GGCISMSNFRVLSAVYEPETPYCGYWHGHGTPPRPRAYVFSSGVDGGWR--ESDSGSDVE 259
GG +SNFRV++ +++ + G P SG DG W+ + ++ DV+
Sbjct: 197 GG---VSNFRVIAVLFDHHR----WLDYRGMPMSMMFSSSGSGGDGTWQVVQWETIDDVD 249
Query: 260 LPS-LELINFVGRAGCSLYWGLDGKD-AMLALHKTTAEFSLVTIPAIVGESYHPSTFRVI 317
LP +E I FVGRA +YWG+D +D A L L ++T EF++ P V Y TFRVI
Sbjct: 250 LPHWIEHITFVGRANGRIYWGIDNEDGATLVLDESTTEFAITMFPENVWAPYDKYTFRVI 309
Query: 318 GGGDDGTMRVVRLIGDDLKIFTQLKGSGGEWVVEKLVRLPVATRGLPGHDVGLF--HHYA 375
G GDDG +RVVR+I +DLK+FTQL G GGEWV+EK V LP ATRGLPG + GLF H A
Sbjct: 310 GDGDDGALRVVRVINNDLKVFTQLAG-GGEWVLEKTVSLPEATRGLPGREEGLFFQHGEA 368
Query: 376 RIVTANERYILVTPRVATWLFSVEVETPVVEREHVRNKYAGAAYPYE-LPWPPVLQACIA 434
IV A+ Y+LVTPR W+FSVE++T VEREH RN Y G AY YE LPWPP LQ C
Sbjct: 369 MIVAASAAYVLVTPREKAWMFSVELDTMEVEREHDRNWYPGPAYQYESLPWPPALQVCTD 428
Query: 435 G 435
G
Sbjct: 429 G 429
>Os09g0344300
Length = 356
Score = 237 bits (605), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 150/275 (54%), Positives = 180/275 (65%), Gaps = 24/275 (8%)
Query: 167 LTRRHQGILRPQEMNSPYRICFGVFLIDGAAADETGGCISMSNFRVLSAVYEPETPYCGY 226
LTRR+QGIL P + YR C GVFL+ G + IS+SNFRV+ A+Y+ Y
Sbjct: 93 LTRRYQGILCPADFTG-YR-CIGVFLLGGGGGGD----ISLSNFRVICALYDL------Y 140
Query: 227 WHGHGTPPRPRAYVFSSGVDGG-WR--ESDSGSDVELPS-LELINFVGRAGCSLYWGLDG 282
W + A VFSSG GG WR +S D++L I+FVGRAG YWG+D
Sbjct: 141 WLNNRHIGVQLACVFSSGSHGGGWRLPKSAVADDIQLTERFNSISFVGRAGGCFYWGIDD 200
Query: 283 KD----AMLALHKTTAEFSLVTIPAIVGESYHPSTFRVIGGGDDGTMRVVRLIGDDLKIF 338
D AML L +TT EFSLVT P + E+YH +TFR+I GGD G MRV+R+IG+DLK+F
Sbjct: 201 DDDEDGAMLVLDETTTEFSLVTFPDSIRENYHMTTFRIIAGGD-GAMRVLRVIGNDLKVF 259
Query: 339 TQLKGSGGEWVVEKLVRLPVATRGLPGHDVGLF-HHYARIVTANERYILVTPRV-ATWLF 396
TQL G G EWV+EKLVRLP ATRGLPGH+ F + A IV AN Y+L+TP V TWLF
Sbjct: 260 TQLAGDG-EWVLEKLVRLPEATRGLPGHEERYFEQNEAMIVAANAAYVLLTPSVEKTWLF 318
Query: 397 SVEVETPVVEREHVRNKYAGAAYPYELPWPPVLQA 431
SVE+ET VVER+H RNKYAG AYPYELP L A
Sbjct: 319 SVELETMVVERQHERNKYAGVAYPYELPLLRALHA 353
>Os09g0341500 Conserved hypothetical protein
Length = 304
Score = 227 bits (579), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 154/300 (51%), Positives = 187/300 (62%), Gaps = 29/300 (9%)
Query: 157 SFPDMVVCEPLTRRHQGILRPQEMNSPYRICFGVFLIDGAAADETGGCISMSNFRVLSAV 216
+FPD+VVCEPLTR HQGIL P ++ S Y+ C GVFL+DG I MSNF+V+ A+
Sbjct: 17 TFPDIVVCEPLTRCHQGILCPPDL-SGYQ-CLGVFLLDGDGDGGR---IGMSNFKVICAL 71
Query: 217 YEPETPYCGYWHGHGTP-PRPRAYVFSSGVDGG-WR---ESDSGSDVELPSLEL--INFV 269
Y+ Y + P A F+SG GG WR + +G DV L + L +FV
Sbjct: 72 YDR------YLLNYILPLSETLACTFTSGSGGGGWRLPHSTAAGGDVTLEHVRLDATSFV 125
Query: 270 GRAGCSLYWGLDGKDA--MLALHKTTAEFSLVTIPAIVGESYHPSTFRVIGGGDDGTMRV 327
GRA +YW ++G + ML L +TTA FSLVT P V ESY TFR+I GGD MRV
Sbjct: 126 GRANGRVYWEIEGDEGGDMLVLDETTAGFSLVTFPENVRESYDKRTFRIIAGGDGVAMRV 185
Query: 328 VRLIGDDLKIFTQLKGSGGEWVVEKLVRLPVATRGLPGHDVGLFHHY---ARIVTANERY 384
VR+I +DLK+F QL G GEWV+EK V LP A RGLPG+D G F A +V A+ Y
Sbjct: 186 VRVINNDLKVFAQLDGD-GEWVLEKRVWLPAAARGLPGYDEGYFQEQNGEAIVVAASAAY 244
Query: 385 ILVTPRVA-TWLFSVEVETPVVEREHVRNKYAGAAYPYELPWPPVLQAC----IAGRRRS 439
+L+TP V TWLFSVE+ET VER H RNKYAG AYP ELPWP LQA I+GRRR
Sbjct: 245 VLLTPPVEDTWLFSVELETMAVERWHERNKYAGVAYPCELPWPRALQATDADQISGRRRC 304
>Os09g0325000 Cyclin-like F-box domain containing protein
Length = 429
Score = 184 bits (466), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 142/395 (35%), Positives = 201/395 (50%), Gaps = 53/395 (13%)
Query: 76 RSLHEPHVV--GHYHVVDPTFAGALR--GGNHVFVPERSPSPADALDRRRLSLDFLPE-- 129
R+L P ++ GHY VD +A A R GG V+VP S +D RRL+LDFLP
Sbjct: 50 RALRFPPLLDAGHYQAVDLRYAAAPRPCGGKIVYVPSAS------VDARRLALDFLPGGG 103
Query: 130 PDGDRAW-WKLADTRGGLVLLYPKTWNASFPDMVVCEPLTRRHQGILRPQEMNSPYRICF 188
+W W+L D+ GGL+LL KT FP+++VC+PL RRH ++ P + Y C
Sbjct: 104 SASRSSWKWELVDSEGGLLLL-AKTRRRRFPELIVCDPLARRH--VVIPPIPDKKYSHCL 160
Query: 189 GVFLIDGAAADETGGCISMSNFRVLSAVYEPETPYCG-------------YWHGHGTPPR 235
VF + G ++S+F + ++E G YW H
Sbjct: 161 AVFFWN------WNGGPNLSDFTLRCVLHEGIDGAAGGVTTARVYDFKRHYWSHH----- 209
Query: 236 PRAYVFSSGVDGGWRESDSGSDVELPSLELINFVGRAGCSLYWGLDGK-DAMLAL---HK 291
R Y+ GG D G V L L + GRA C +++G D DA+LAL +
Sbjct: 210 -RKYLDRWFARGG--AIDDGDGVHLRGATL-HLTGRAACWIFFGNDADADAVLALDMRYP 265
Query: 292 TTAEFSLVTIPAIV--GESYHPSTFRVIGGGDDGTMRVVRLIGDDLKIFTQLKGSGGEWV 349
+ +F L +P + G S FR I G + +R+V ++G DLK+F + GSG W
Sbjct: 266 SACKFMLARVPGSLRGGSCGDRSGFRFIDGDNPDDVRLVSVVGGDLKVFLRRDGSGDAWE 325
Query: 350 VEKLVRLPVATRGLPGHDVGLFH---HYARIVTANERYILVTPRVATWLFSVEVETPVVE 406
EK + L AT G+PG F A+IV+A Y+++TP TWLFSVE+ T VE
Sbjct: 326 PEKNLSLRDATSGMPGRKESYFGGAGAAAKIVSAGAGYVVLTPAEETWLFSVELATMEVE 385
Query: 407 REHVRNKYAGAAYPYELPWPPVLQACIAGRRRSRR 441
R+H RN+YAG +PY PWPP L A ++ +R+R+
Sbjct: 386 RKHSRNRYAGEFFPYHPPWPPTLSAHVSYCKRNRK 420
>Os09g0323200
Length = 423
Score = 161 bits (408), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 141/408 (34%), Positives = 193/408 (47%), Gaps = 58/408 (14%)
Query: 66 VADAGFLARFRSLHEPHVVGHYHVV--DPTFAGALRGGNHVFVPERSPSPADA---LDRR 120
VADAGFL RFR LHEP V G+Y + FA G + R PSP+ A +D
Sbjct: 35 VADAGFLRRFRGLHEPTVAGYYFDSRGESPFATLTMGRQEAAICFR-PSPSAAALTIDAG 93
Query: 121 RLSLDFLPE----PDGDRAWWKLADTRGGLVLLYPKTWNAS---FPDMVVCEPLTRRHQG 173
SL FL + P + W +AD+RG LVLL + FP++VVCEPLTRRH+
Sbjct: 94 SFSLAFLRDDDVLPSQWSSSWSVADSRGSLVLLRSLAAGHAPFCFPEVVVCEPLTRRHRR 153
Query: 174 ILRPQEMNSPYRICF--GVFLIDGAAADE--TGGCISMSNFRVLSAVYEPETPYCGYWHG 229
IL + + CF G +L DG AA + + I MSNFRV+ +Y + G
Sbjct: 154 ILPSPDFGTG---CFFYGCYLADGEAAGDSSSSSSIGMSNFRVVYELYRDD--------G 202
Query: 230 HGTPPRPRAYVFSSGVDGGWRESDSGSDVELPSLELINFVGRAGCSLYWGLDGKDAMLAL 289
R + + WRE+ G + P ++ +GRAG S W M L
Sbjct: 203 GAGLARAAVFAAGAAGAHSWRETSVGHAI--PPFHRMSLMGRAGGS--WYFHEGSTMAVL 258
Query: 290 HKTTAEFSLVTIPAIVGESYHPSTFRVIGGGDDGTMRVVRLIGDDLKIFTQLKG-----S 344
+TAEFS + + HP + I G DG R+ G L + + +
Sbjct: 259 DGSTAEFSSSPF-TLQQQPIHPGVYLYIAEGRDGEPRMFTTTGGILTVLIKRARRPAVVA 317
Query: 345 GG-----EWVVEKLVRLPVATRGLPGHDVGLFHHYA---RIVTANERYILVTPRVAT--- 393
GG EW VEK VRL ATRGLPG+D F ++T +++++PR+ T
Sbjct: 318 GGEDDVEEWAVEKSVRLSEATRGLPGYDASFFGGGGGPMDVITRGVGFVVLSPRIRTTKE 377
Query: 394 -------WLFSVEVETPVVEREHVRNKYAGAAYPYELPWPPVLQACIA 434
W F+V++ET VER H + +P +LPWPP L+AC A
Sbjct: 378 EAAAPARWWFAVDLETAEVERVH--DDLGTIQFPCQLPWPPNLRACPA 423
>Os09g0344400 Cyclin-like F-box domain containing protein
Length = 450
Score = 155 bits (393), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 135/443 (30%), Positives = 197/443 (44%), Gaps = 50/443 (11%)
Query: 22 EAATAGPTSVNDVPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVADAGF-LARFRSLHE 80
++ PT++ D+PD VA+ F R L
Sbjct: 7 KSPAVSPTTLGDLPDKLLEHILVRVASPVWLTRAAATCKRWRRIVANDNFPFHMDRRLPN 66
Query: 81 PHVVGHYHVVDPTFAGALRGGNHV-FVPERSPSPADALDRRRLSLDFLPEPDGDRAWWKL 139
P V GHYH G R + FVP S RR SLDFLP G R+ W L
Sbjct: 67 P-VAGHYHYSRRRADGRGRSSRLITFVPSSSAVALGVDARRHFSLDFLP---GGRSSWDL 122
Query: 140 ADTRGGLVLLYPKTWNAS-------FPDMVVCEPLTRRHQGILRPQEMNSPYRICFGVFL 192
D+ ++LL + FPD+VVCEP+TRR++ I R +EM ++ C GVFL
Sbjct: 123 VDSHSSILLLAATSSTRRRGHRRGLFPDLVVCEPVTRRYKLIPRMEEMK--HQRCLGVFL 180
Query: 193 IDGAAADETGGCISMSNFRVLSAVYEPETPYCGYWHGHGT--------------PPRPRA 238
+ + MS+ RV+ VY Y G G GT PRPR+
Sbjct: 181 QSYPTSSTSNRSSIMSSLRVICVVY---IEYSGVSDGMGTVRACVFDPNGSNSWKPRPRS 237
Query: 239 ---YVFSSGVDGGWRESDSGSDVELPSLELINFVGRAGCSLYWGLDGKDAMLALHKTTAE 295
Y+F W + G + L E +G A +++W + G D +L L K E
Sbjct: 238 ACWYMFKP----SWNMAKHG--IHLRGSEHARLLGHAAGAVFWAVGGDDTLLVLDKWRTE 291
Query: 296 FSLVTIPAIVGESYHPSTFRVIGGGDDGTMRVVRLIGDD-LKIFTQLKG--SGGEWVVEK 352
F ++ +P V S + G +DG +RVV L ++ +++F +G S GEWV++K
Sbjct: 292 FEVLRLPGSVRASGLRAIVDGGNGDNDGKLRVVCLDEENVVRVFATWRGQHSNGEWVLQK 351
Query: 353 LVRLPVATRGLPGHDVGLFHHYARIVTANERYILVTP-RVATWLFSVEVET-PVVEREHV 410
+RL +T GL G+ G + A +++ P TW+FSV++ET + E + V
Sbjct: 352 SLRLEESTMGLAGYKAGRGGAAMVVAAATAGSVVLAPVEGMTWMFSVDLETMEIAECKEV 411
Query: 411 RNKYAGAAYPYELPWPPVLQACI 433
+ A YP ELPW P L+AC+
Sbjct: 412 ----SVAVYPCELPWRPTLRACV 430
>Os09g0341600 Cyclin-like F-box domain containing protein
Length = 467
Score = 153 bits (386), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 143/445 (32%), Positives = 199/445 (44%), Gaps = 58/445 (13%)
Query: 28 PTSVNDVPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVADAGFLARFRSLHEPH-VVGH 86
PT+++DVPD + F+ + PH +VGH
Sbjct: 39 PTTLHDVPDKLLELILQNLDSSLSLVRAAATCQRWRRVITQQSFVLDYDI--PPHQIVGH 96
Query: 87 YH--VVDPTFAGALRGG---NHVFVPERSPSPADALDRRRLSLDFLPEPDGDRAWWKLAD 141
YH + P+F G + FVP RRR SLDFLP G + W++ D
Sbjct: 97 YHHRLHPPSFTTPKPRGCCSSVAFVPTSPEFLTTGRRRRRFSLDFLP---GGGSRWEIVD 153
Query: 142 TRGGLVLLYP---KTW-NASFPDMVVCEPLTRRHQGILRPQEMNSPYRICFGVFLIDGAA 197
+RG L+LL W FPD+VVCEP+TRRH+ I R + M Y C GVFL+D
Sbjct: 154 SRGSLLLLAKKKKSNWMRRCFPDLVVCEPVTRRHKVIPRMEVMK--YHHCVGVFLLDF-- 209
Query: 198 ADETGGCISMSNFRVLSAVYEP---------ETPYCGY------WHGHGTPPR----PRA 238
+ G SMSNF+V VY+P C Y W H P P+
Sbjct: 210 --DRNGSFSMSNFKVTCVVYQPYFGVSGDVGTITVCEYMEDMWDWTRHMKPDEDDEVPKL 267
Query: 239 YVFSSGVDGGWRESDSGSDVELPSLELINFVGRAGCSLYWGL-DGKDAMLALHKTTAEFS 297
+ + V + + L + + F+G AG S++W + + + ++L L + +
Sbjct: 268 FEWYVVVT----HLRTRPGIHLHDRDSLRFLGHAGGSIFWAIKEDEGSLLILDENGIDPH 323
Query: 298 LVTIPAIVGESYHPSTFRVI--GGGDDGTMRVVRLIGDDLKIFTQLKGSGGEWVVEKLVR 355
++ PA V S R I G GD +RVV L G+ L++ T L + E V+EK +
Sbjct: 324 ILRTPAGV----RGSELRAIVDGNGDRHNVRVVVLEGETLRVVTWLCDTD-ELVLEKSLH 378
Query: 356 LPVATRGLPGHDVGLFHHYARIVTANERYILVTP--RVATWLFSVEVETPVVEREHVRNK 413
L ATR L G+ F IVT + +VTP TW+ S+++ET E K
Sbjct: 379 LVEATRRLQGYKESCFCGGVDIVTVSTSCAVVTPVEEKTTWMVSIDLET----MEVTECK 434
Query: 414 YAGAAYPYELPWPPVLQACIAGRRR 438
YA AYP ELPWPP L AC RR
Sbjct: 435 YASVAYPCELPWPPTLSACTVNCRR 459
>Os09g0337800
Length = 434
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 136/414 (32%), Positives = 187/414 (45%), Gaps = 76/414 (18%)
Query: 66 VADAGFLARFRSLHEPHVVGHYHVVDP-TFAGALRGGNHVFVPERS--PSPADALDRRRL 122
VADAGFL +RS +G+Y D FA R V + P+ A +R
Sbjct: 38 VADAGFLRLYRS-RNALTIGNYIATDTGIFANWSRPSPSCRVSSLAFVPAAAAVTSSKRF 96
Query: 123 SLDFLPEPDGDRAWWKLADTRGGLVLLYPKTW---NASFPDMVVCEPLTRRHQGILRPQE 179
SLDF+PEP W LAD+ GGLVLL P+ + NAS +VVCEP TRR++ ++ P E
Sbjct: 97 SLDFVPEPGNTS--WVLADSHGGLVLLVPERYYWGNASSVSIVVCEPWTRRYRTVIPPLE 154
Query: 180 MNSPYRICFGVFLIDGAAADETGG-----CISMSNFRVLSAVYEPETPYCGYWHGHGTPP 234
+ + C L+ E +SNF VL +Y G G
Sbjct: 155 --NKHVACLDASLLGAGTGSEKKNNNNNHVAGVSNFTVLLILYT---------FGSGAK- 202
Query: 235 RPRAYVFSS--GVDGGWR----ESDSGSDVELPS----------LELINFVGRAGCSLYW 278
A +FS+ G D R S D+ P + ++F GRAG SLYW
Sbjct: 203 --TACIFSTFTGADEELRLRLTRSMDLGDLIRPKGVPRRQRHFDADAMHFAGRAGGSLYW 260
Query: 279 GLDGKDAMLALHKTTAEFSLVTIPAIVGES-----YHPSTFRVIGGGDDGTMRVVRLIG- 332
G + AL ++T E S +T+P Y R + G D G R+VR++
Sbjct: 261 GTI-YGVVFALDESTGELSPLTLPKCCASEQPRFYYRQWNLRAV-GDDAGGGRLVRVVQH 318
Query: 333 DDLKIFTQLKGSGG-EWVVEKLVRLP-VATRGLPGHDVGLFHHYARIV---------TAN 381
DL++ T L GG EW VEK +RLP + TRGLP Y+R+V
Sbjct: 319 SDLEVLTPLHAGGGREWTVEKTLRLPELITRGLPE-----LEDYSRLVERLTGVKILEVM 373
Query: 382 ERYILVTPRVAT--WLFSVEVETPVVEREHVRN----KYAGAAYPYELPWPPVL 429
R +++TP + W FSV++ET +E EHV + +P + PWPP L
Sbjct: 374 GRSVVLTPPEGSGMWPFSVDLET--MELEHVYDWGDELVQKWVFPVKPPWPPAL 425
>Os09g0323400
Length = 422
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 119/374 (31%), Positives = 168/374 (44%), Gaps = 56/374 (14%)
Query: 67 ADAGFLARFRSLHEPHVVGHYHVVDPTFAGALRGGNHVFVPERSPSPADALDRRRLSLDF 126
ADAGFL RFRSLH P + G+Y+ + + + + + A A+D SLDF
Sbjct: 38 ADAGFLRRFRSLHAPAIAGYYY-------NSEKFTSFAPSSPSASASAPAIDDSHFSLDF 90
Query: 127 LPE-----PDGDR----AWWKLADTRGGLVLLYPKTWNASFPD-----MVVCEPLTRRHQ 172
L DG R + W++ D+RG L+LL + S PD ++VCEPLTRR+Q
Sbjct: 91 LQVIVQDIVDGSRPQSSSSWRIMDSRGSLLLL---DFAGSHPDDGVRSLLVCEPLTRRYQ 147
Query: 173 GILRPQEMNSPYRICFG---VFLIDGAAADETGGCISMSNFRVLSAVYEPETPYCGYWHG 229
++ P +L DGA ADE GG + MSNFRV VYE Y H
Sbjct: 148 WVVPPSAGRGFGGGGCEFSRAYLADGAEADEAGGRVGMSNFRV---VYEL------YHHH 198
Query: 230 HGTPPRPRAYVFSSGVDGGWRESDSGSDVELPSLELINFVGRAGCSLYWGLD--GKDAML 287
HG + G W E G+ S ++ +G AG S Y + ++ L
Sbjct: 199 HGVSAAVFTFTTGGGAQLSWEEKAIGNIA--GSSSCMHVLGHAGGSWYLTAEYSASESEL 256
Query: 288 ALHKTTAEFSLVTIPAIVGESYHPSTFRVIGGGDDGTMRVVRLI--GDDLKIFTQLKGSG 345
L V I + PS FRV G DG R++ ++ G LK+F + G
Sbjct: 257 PLEADNWLCWDVMI-------FFPSCFRV-AEGRDGHPRILTVVPGGGALKVFARCDNGG 308
Query: 346 GEWVVEKLVRLPVATRGLPGH--DVGLFHHYARIVTANERYILVTPRV--ATWLFSVEVE 401
GEWV EK++ A L G + IVT + +V+P+V W F+V+++
Sbjct: 309 GEWVEEKMIPCAAAMHRLLGRPASSSSLGQWMSIVTTRPGFAVVSPQVREGRWFFAVDLD 368
Query: 402 TPVVER--EHVRNK 413
T R E V+ K
Sbjct: 369 TMETPRATEQVQTK 382
>Os02g0274800
Length = 256
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 105/259 (40%), Positives = 132/259 (50%), Gaps = 38/259 (14%)
Query: 189 GVFLIDGAAADETGGCISMSNFRVLSAVYEPETPYCGYWHGHGTPPRPRAYVFSSGVDGG 248
G +LIDG + + MSN+RVL E A VFS G DGG
Sbjct: 12 GAYLIDGGGGERG---VGMSNYRVLCMFGE------------------LACVFSPGNDGG 50
Query: 249 WRESDSG------SDVELPSLELINFVGRAGCSLYWGLDGKDAMLALHKTTAEFSLVTIP 302
WR D+G DVE P E FVGRA +YW G + + T F L+ P
Sbjct: 51 WRFVDTGLKYGDGEDVEFP--EDTQFVGRAAGKIYWWAPGG-LVQVFDEATDTFFLMEFP 107
Query: 303 AIVGESYHPSTFRVIGGGDDGTMRVVRLIGDDLKIFTQLKGSGGEWVVEKLVRLPVATRG 362
+ YH S RVIGG D G +RVVR+ G+DL+I+ + GGEW VE+ VRL ATRG
Sbjct: 108 KHMRWEYHKSNLRVIGGVDGGGIRVVRMTGEDLEIYGE--SGGGEWAVERSVRLAEATRG 165
Query: 363 LPGHDVGLFHH---YARIVTA-NERYILVTP-RVATWLFSVEVETPVVEREHVRNKYAGA 417
LPG F ARIVTA + ++ + P TWLFSV++ET ER+H RNK+ G
Sbjct: 166 LPGRQEVFFTAEAPAARIVTAGGDGFVTLAPAEDETWLFSVDLETMEAERDHERNKHVGE 225
Query: 418 AYPYEL-PWPPVLQACIAG 435
A+P P V +AC G
Sbjct: 226 AHPCSAPPLAAVFRACGVG 244
>Os09g0324100
Length = 434
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 95/319 (29%), Positives = 129/319 (40%), Gaps = 55/319 (17%)
Query: 71 FLARFRSLH-----EPHVVGHYHVVD-PTFAGALRGGNHVFVPERSPSPADALDRRRLS- 123
FL RFR H E + VG YHV D P + R P+ DRR S
Sbjct: 69 FLLRFRGQHSWTRTEAYTVGSYHVADNPNYRWPRRRHGSDDDGAAIVDPSTDFDRRHFSS 128
Query: 124 LDFLPEPDGDRAWWKLADTRGGLVLLYPKT--WNA-SFPDMVVCEPLTRRHQGILRPQEM 180
LDF+P+ W + D +VLL K W FPD++VCEPLTRR + I EM
Sbjct: 129 LDFIPDAKS----WHVVDGVSSVVLLAKKRIGWKRRCFPDLMVCEPLTRRRRAITPLPEM 184
Query: 181 NSPYRICFGVFLIDGAAADETGGCISMSNFRVLSAVYEPETPYCGYWHGHGTPPRPRAYV 240
S C G FL E ++MS F V+ A+YE Y G G P +
Sbjct: 185 RSHR--CLGAFL-----KHERDVRVNMSRFTVICALYE---RYDG-----GVPDDVGTAM 229
Query: 241 FSSGVDGGWRESDSGSDVELPSLELINFVGRAGCSLYWGLDGKDAMLALHKTTAEFSLVT 300
S WR ++ + ++ L G DA + + + FSL
Sbjct: 230 GYSFCRCEWRRRWQWRVSKITAKSDVH------------LHGADASMLVLVDDSRFSLDA 277
Query: 301 IPAIVGESYHPST-----FRVIGGG--------DDGTMRVVRLIGDDLKIFTQLKGSGGE 347
+PA + S P F V+ G D R+V L G +L++F++ + G
Sbjct: 278 LPAGLRWSSSPQHDDEPPFHVVDHGGEPYPPFIDSLAARIVGLSGGELRVFSRWRDEDG- 336
Query: 348 WVVEKLVRLPVATRGLPGH 366
W + V LP TR P H
Sbjct: 337 WELLNRVSLPEITRAPPPH 355
>Os10g0183700
Length = 416
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 114/380 (30%), Positives = 156/380 (41%), Gaps = 58/380 (15%)
Query: 66 VADAGFLARFRSLHEPHVVGHYHVVDPTFAGALRGGNHVFVPERSPSPADALDRRRLSLD 125
V + GF A RS+ + +VG VVDPTF L + R SLD
Sbjct: 75 VCNNGF-AVSRSIADSELVGE--VVDPTFLPRLTPRGFLGAVNRCID---------FSLD 122
Query: 126 FLPEPDGDRAWWKLADTRGGLVLLYPKTWN-ASFPD-MVVCEPLTRRHQGILRPQEMNSP 183
LP + W LADT GL+LL K + PD +C+P++ R + NS
Sbjct: 123 SLPYDEH----WALADTHDGLLLLCTKFADRMDIPDNFAICDPVSGRSVLLHVAPVTNSA 178
Query: 184 YRICFGVFLIDGAAA---DETGGCISMSNFRVLSAVYEPETPYC-GYWHGHGTPPRPRAY 239
Y GAA D GG + V S +E C W PR Y
Sbjct: 179 YL---------GAALRTDDSDGGGV------VCSFEFEIILVTCYNMWE-------PRLY 216
Query: 240 VFSSGVDGGWRESDSGSDVELPSLELINFVGRAGCSLYW----GLDGKDAMLALHKTTAE 295
VFSS G W + LP L + A S+YW G DG +LAL T +
Sbjct: 217 VFSSR-SGQW--TVHAYIPMLPMLSAFSGDMHANGSVYWLIDDGGDGGAYLLALDARTKQ 273
Query: 296 FSLVTIPAIVGESYHPSTFRVIGGGDDGTMRVVRLIGDDLKI----FTQLKGSGGEWVVE 351
FS++ + + + Y RVI DDG +RVV ++ + + S G WV E
Sbjct: 274 FSIIKLLSSMRTRYD-GNMRVIRS-DDGELRVVAFAAAAARLEFWHLDKSRSSRGRWVRE 331
Query: 352 KLVRLPVATRGLPGHDVGLFHHYARIVTANERYILVTPRVATWLFSVEVETPVVEREHVR 411
V L G+ V ARI+ A E ++ + + W+F+++V+ V+ R R
Sbjct: 332 SRVEL-AHVDGVMELCVDADDDVARIMDAGEGFVFLKHYGSEWVFALDVQAMVLFRLPHR 390
Query: 412 NKYAGAAYPYELPWPPVLQA 431
Y G A PY L P L A
Sbjct: 391 RYYFGPALPYRLVLKPPLPA 410
>Os09g0325650
Length = 218
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/113 (44%), Positives = 64/113 (56%), Gaps = 15/113 (13%)
Query: 83 VVGHYHVVDPTFAGALRGGNHVFVPERSPSPADALDRRRLSLDFLPEPDGDRAWWKLADT 142
+VGHY+ + G GG VFVP SPS +D R SL FLP+ D W+L D+
Sbjct: 95 IVGHYY-----YPGRGSGGA-VFVPSASPSLQPRVDGRHFSLGFLPDSDS----WRLVDS 144
Query: 143 RGGLVLLYPKT--W-NASFPDMVVCEPLTRRHQGILRPQEMNSPYRICFGVFL 192
G L+LL + W FPD+VVCEPLTRR++ I R +EM + C G FL
Sbjct: 145 SGSLLLLAKRKSGWMRHCFPDLVVCEPLTRRYRLIPRLEEMK--HHRCIGAFL 195
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.321 0.140 0.448
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 16,818,559
Number of extensions: 829948
Number of successful extensions: 1789
Number of sequences better than 1.0e-10: 17
Number of HSP's gapped: 1712
Number of HSP's successfully gapped: 19
Length of query: 441
Length of database: 17,035,801
Length adjustment: 104
Effective length of query: 337
Effective length of database: 11,605,545
Effective search space: 3911068665
Effective search space used: 3911068665
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 157 (65.1 bits)