BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os09g0290900 Os09g0290900|AK100657
(147 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os09g0290900 Conserved hypothetical protein 300 4e-82
Os06g0221700 212 8e-56
Os07g0257000 211 1e-55
Os05g0234700 Zinc finger, TTF-type domain containing protein 200 2e-52
Os04g0199100 195 9e-51
Os06g0560900 194 3e-50
Os04g0285300 187 3e-48
Os11g0476700 167 2e-42
Os10g0569800 164 2e-41
Os06g0111000 163 5e-41
Os05g0233900 Zinc finger, TTF-type domain containing protein 134 2e-32
Os02g0234000 Conserved hypothetical protein 127 3e-30
Os08g0448400 123 5e-29
Os01g0293600 Zinc finger, TTF-type domain containing protein 123 6e-29
Os09g0314366 123 6e-29
Os02g0654633 121 2e-28
Os02g0599175 HAT dimerisation domain containing protein 119 8e-28
Os04g0229000 118 1e-27
Os12g0191900 113 4e-26
Os11g0247800 Zinc finger, TTF-type domain containing protein 109 8e-25
Os01g0181400 107 3e-24
Os12g0528500 Winged helix repressor DNA-binding domain cont... 107 3e-24
Os11g0247900 105 9e-24
Os02g0463100 81 3e-16
Os08g0333600 76 9e-15
Os02g0301400 Thioredoxin-like fold domain containing protein 76 1e-14
Os05g0194700 70 4e-13
>Os09g0290900 Conserved hypothetical protein
Length = 147
Score = 300 bits (767), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 147/147 (100%), Positives = 147/147 (100%)
Query: 1 VAQAQEIVEALELGEIESGQGLNQEMGLGRPGDTRWGSHYKTVQHILIMYRSIRKVLLQV 60
VAQAQEIVEALELGEIESGQGLNQEMGLGRPGDTRWGSHYKTVQHILIMYRSIRKVLLQV
Sbjct: 1 VAQAQEIVEALELGEIESGQGLNQEMGLGRPGDTRWGSHYKTVQHILIMYRSIRKVLLQV 60
Query: 61 GKDRSQSTEAIKAQTALQSFVSFEIVFMAHLLNTILGYTDDLNTALQRRAQDIVNAVELI 120
GKDRSQSTEAIKAQTALQSFVSFEIVFMAHLLNTILGYTDDLNTALQRRAQDIVNAVELI
Sbjct: 61 GKDRSQSTEAIKAQTALQSFVSFEIVFMAHLLNTILGYTDDLNTALQRRAQDIVNAVELI 120
Query: 121 VLTKMQLEMLRQDDGWENFLKKVTSFL 147
VLTKMQLEMLRQDDGWENFLKKVTSFL
Sbjct: 121 VLTKMQLEMLRQDDGWENFLKKVTSFL 147
>Os06g0221700
Length = 879
Score = 212 bits (540), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 100/147 (68%), Positives = 119/147 (80%)
Query: 1 VAQAQEIVEALELGEIESGQGLNQEMGLGRPGDTRWGSHYKTVQHILIMYRSIRKVLLQV 60
VAQAQ IVE L+LG+IE+G+GLNQEMGLGRP DTRWGSHYKTV H+L +Y SI+KVL+ V
Sbjct: 504 VAQAQRIVEELDLGDIETGKGLNQEMGLGRPADTRWGSHYKTVMHVLSLYPSIQKVLIMV 563
Query: 61 GKDRSQSTEAIKAQTALQSFVSFEIVFMAHLLNTILGYTDDLNTALQRRAQDIVNAVELI 120
GKDRS E AQT L F SFE VFMAHL+ T+LG+T DLN ALQ+R QDIVNAV LI
Sbjct: 564 GKDRSFGAECANAQTVLTIFQSFEFVFMAHLMQTVLGFTSDLNHALQKRDQDIVNAVGLI 623
Query: 121 VLTKMQLEMLRQDDGWENFLKKVTSFL 147
+LTK QL+ LR+D GW++FL++V SF
Sbjct: 624 LLTKFQLQQLREDPGWDDFLQEVQSFC 650
>Os07g0257000
Length = 897
Score = 211 bits (538), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 100/147 (68%), Positives = 119/147 (80%)
Query: 1 VAQAQEIVEALELGEIESGQGLNQEMGLGRPGDTRWGSHYKTVQHILIMYRSIRKVLLQV 60
VAQAQ IVE L+LG+IE+G+GLNQEMGLGRP DTRWGSHYKTV H+L +Y SI+KVL+ V
Sbjct: 522 VAQAQRIVEELDLGDIETGKGLNQEMGLGRPTDTRWGSHYKTVMHVLSLYPSIQKVLIMV 581
Query: 61 GKDRSQSTEAIKAQTALQSFVSFEIVFMAHLLNTILGYTDDLNTALQRRAQDIVNAVELI 120
GKDRS E AQT L F SFE VFMAHL+ T+LG+T DLN ALQ+R QDIVNAV LI
Sbjct: 582 GKDRSFGAECANAQTVLTIFQSFEFVFMAHLMQTVLGFTSDLNHALQKRDQDIVNAVGLI 641
Query: 121 VLTKMQLEMLRQDDGWENFLKKVTSFL 147
+LTK QL+ LR+D GW++FL++V SF
Sbjct: 642 LLTKFQLQQLREDPGWDDFLQEVQSFC 668
>Os05g0234700 Zinc finger, TTF-type domain containing protein
Length = 679
Score = 200 bits (509), Expect = 2e-52, Method: Composition-based stats.
Identities = 93/146 (63%), Positives = 121/146 (82%), Gaps = 1/146 (0%)
Query: 1 VAQAQEIVEALELGEIESGQGLNQEMGLGRPGDTRWGSHYKTVQHILIMYRSIRKVLLQV 60
+AQA+ ++EAL+LGEIESGQGLNQEMGL RPGDTRWGSHYKTV H++++Y SI+K+L +V
Sbjct: 412 IAQAEYMIEALKLGEIESGQGLNQEMGLARPGDTRWGSHYKTVMHVMLLYPSIKKLLFKV 471
Query: 61 GKDRSQSTEAIKAQTALQSFVSFEIVFMAHLLNTILGYTDDLNTALQRRAQDIVNAVELI 120
GK+ +++ EAI AQT LQ F SFE+VF+ H++N I GYT D ALQRR QDIVNA++L+
Sbjct: 472 GKECNEA-EAIGAQTMLQVFQSFELVFLLHMMNEIFGYTSDFCNALQRREQDIVNAMDLL 530
Query: 121 VLTKMQLEMLRQDDGWENFLKKVTSF 146
TK +L++LR+D GW+ FL KVTSF
Sbjct: 531 EFTKAELDVLREDCGWKEFLGKVTSF 556
>Os04g0199100
Length = 587
Score = 195 bits (496), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 91/147 (61%), Positives = 115/147 (78%), Gaps = 1/147 (0%)
Query: 1 VAQAQEIVEALELGEIESGQGLNQEMGLGRPGDTRWGSHYKTVQHILIMYRSIRKVLLQV 60
+AQA+ ++EAL+LGEIESGQGLNQEMGL RPGDTRWGSHYKT+ H++++Y SI+KVL +V
Sbjct: 322 IAQAEYMIEALKLGEIESGQGLNQEMGLARPGDTRWGSHYKTIMHVMLLYPSIKKVLFKV 381
Query: 61 GKDRSQSTEAIKAQTALQSFVSFEIVFMAHLLNTILGYTDDLNTALQRRAQDIVNAVELI 120
GK+ EAI AQT LQ F SFE VF+ H++N I GYT D AL RR QDIVNA++L+
Sbjct: 382 GKE-CNGAEAIGAQTMLQVFQSFEFVFLLHMMNEIFGYTSDFCNALLRREQDIVNAMDLL 440
Query: 121 VLTKMQLEMLRQDDGWENFLKKVTSFL 147
TK +L++LR+D G + FL KVTSF
Sbjct: 441 EFTKAELDVLREDCGCKEFLGKVTSFC 467
>Os06g0560900
Length = 773
Score = 194 bits (492), Expect = 3e-50, Method: Composition-based stats.
Identities = 89/146 (60%), Positives = 115/146 (78%), Gaps = 1/146 (0%)
Query: 1 VAQAQEIVEALELGEIESGQGLNQEMGLGRPGDTRWGSHYKTVQHILIMYRSIRKVLLQV 60
+AQA+ ++EA +LGEIE+GQGLNQEMGL RPGDTRWGSHYKTV H++ +Y SI+KVL ++
Sbjct: 438 IAQAEYMIEAFKLGEIETGQGLNQEMGLARPGDTRWGSHYKTVMHVMSLYPSIKKVLFRI 497
Query: 61 GKDRSQSTEAIKAQTALQSFVSFEIVFMAHLLNTILGYTDDLNTALQRRAQDIVNAVELI 120
GK+ EAI AQT L+ F SFE VF+ HL+N I GYT D ALQ+R QD+VNA++L+
Sbjct: 498 GKE-CTGVEAIGAQTMLEVFQSFEFVFLLHLMNDIFGYTADFCQALQKREQDVVNAMDLL 556
Query: 121 VLTKMQLEMLRQDDGWENFLKKVTSF 146
TK++L++LR+DDGW F KVTSF
Sbjct: 557 AFTKVELDVLREDDGWREFHGKVTSF 582
>Os04g0285300
Length = 629
Score = 187 bits (474), Expect = 3e-48, Method: Composition-based stats.
Identities = 90/146 (61%), Positives = 112/146 (76%), Gaps = 2/146 (1%)
Query: 1 VAQAQEIVEALELGEIESGQGLNQEMGLGRPGDTRWGSHYKTVQHILIMYRSIRKVLLQV 60
+AQA+ ++EAL+LGEI+SGQGLNQEMGL RPGDTRWGSHYKTV H++ +Y SI+K L +V
Sbjct: 362 IAQAEYMIEALKLGEIQSGQGLNQEMGLARPGDTRWGSHYKTVMHVMFLYPSIKKFLFKV 421
Query: 61 GKDRSQSTEAIKAQTALQSFVSFEIVFMAHLLNTILGYTDDLNTALQRRAQDIVNAVELI 120
GK+ EAI AQT LQ F SFE VF H++N I T D ALQRR QDIVNA++L+
Sbjct: 422 GKE-CNGAEAIGAQTMLQVFQSFEFVFSWHMMNEIF-ETSDFCNALQRREQDIVNAMDLL 479
Query: 121 VLTKMQLEMLRQDDGWENFLKKVTSF 146
TK +L++LR+D GW+ FL KVTSF
Sbjct: 480 EFTKAELDVLREDCGWKEFLGKVTSF 505
>Os11g0476700
Length = 840
Score = 167 bits (423), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 79/145 (54%), Positives = 108/145 (74%), Gaps = 1/145 (0%)
Query: 3 QAQEIVEALELGEIESGQGLNQEMGLGRPGDTRWGSHYKTVQHILIMYRSIRKVLLQVGK 62
+AQ++ +A++LGEI SG GLNQEM L RPGDTRWGSHYKT+ HI+ MY +IR+VL+ +GK
Sbjct: 477 RAQKLKKAIDLGEIASGSGLNQEMALARPGDTRWGSHYKTILHIIDMYDTIREVLITIGK 536
Query: 63 DRSQSTEAIKAQTALQSFVSFEIVFMAHLLNTILGYTDDLNTALQRRAQDIVNAVELIVL 122
D +Q + + +F SFE VF AHL+ ILGYT++L+ +LQ+R QDIVNA+ L+ L
Sbjct: 537 DPTQREDWPNIHAMVLAFESFEFVFNAHLMLVILGYTNELSNSLQKRDQDIVNAMSLVGL 596
Query: 123 TKMQLEMLRQDDGWENFLKKVTSFL 147
K +++ +R +GWE FL KVTSF
Sbjct: 597 EKKKMQQMRS-NGWEGFLGKVTSFC 620
>Os10g0569800
Length = 811
Score = 164 bits (416), Expect = 2e-41, Method: Composition-based stats.
Identities = 81/145 (55%), Positives = 107/145 (73%), Gaps = 2/145 (1%)
Query: 3 QAQEIVEALELGEIESGQGLNQEMGLGRPGDTRWGSHYKTVQHILIMYRSIRKVLLQVGK 62
+AQ+I+EALELGEIESG GLNQEMGL RPGDTRWGSHYKT+ HI+ MY +I +VL+ +GK
Sbjct: 449 RAQKIMEALELGEIESGVGLNQEMGLARPGDTRWGSHYKTILHIIGMYPTIHEVLITLGK 508
Query: 63 DRSQSTEAIKAQTALQSFVSFEIVFMAHLLNTILGYTDDLNTALQRRAQDIVNAVELIVL 122
D +Q + + + +F SF+ VF AHL+ ILGYT++L LQ+R QDIVNA+ L+ L
Sbjct: 509 DPTQRDDWPRIHAVVGAFESFDFVFSAHLMLVILGYTNELCLCLQKRDQDIVNAMSLVTL 568
Query: 123 TKMQLEMLRQDDGWENFLK-KVTSF 146
K +++ LR +GWE F + V SF
Sbjct: 569 AKERMQKLRS-EGWEEFFQGTVVSF 592
>Os06g0111000
Length = 553
Score = 163 bits (412), Expect = 5e-41, Method: Composition-based stats.
Identities = 79/144 (54%), Positives = 106/144 (73%), Gaps = 1/144 (0%)
Query: 3 QAQEIVEALELGEIESGQGLNQEMGLGRPGDTRWGSHYKTVQHILIMYRSIRKVLLQVGK 62
+AQ++ +AL LGEI SG GLNQEM L RPGDTRWGSHYKT+ HI+ MY +IR+VL+ +GK
Sbjct: 211 RAQKLKKALNLGEIASGSGLNQEMALARPGDTRWGSHYKTILHIIDMYDTIREVLITIGK 270
Query: 63 DRSQSTEAIKAQTALQSFVSFEIVFMAHLLNTILGYTDDLNTALQRRAQDIVNAVELIVL 122
D +Q + + +F SFE VF AHL+ ILGYT++ + +LQ+R QDIVNA+ L+ L
Sbjct: 271 DPTQREDWPIIHAMVLAFESFEFVFNAHLMLVILGYTNEFSNSLQKRDQDIVNAMSLVGL 330
Query: 123 TKMQLEMLRQDDGWENFLKKVTSF 146
K +++ +R +GWE FL KVTSF
Sbjct: 331 AKKKMQQMRF-NGWEGFLGKVTSF 353
>Os05g0233900 Zinc finger, TTF-type domain containing protein
Length = 864
Score = 134 bits (337), Expect = 2e-32, Method: Composition-based stats.
Identities = 70/146 (47%), Positives = 87/146 (59%), Gaps = 37/146 (25%)
Query: 1 VAQAQEIVEALELGEIESGQGLNQEMGLGRPGDTRWGSHYKTVQHILIMYRSIRKVLLQV 60
+AQA+ ++EAL+LGEIESGQGLNQEMGL RP
Sbjct: 412 IAQAEYMIEALKLGEIESGQGLNQEMGLARP----------------------------- 442
Query: 61 GKDRSQSTEAIKAQTALQSFVSFEIVFMAHLLNTILGYTDDLNTALQRRAQDIVNAVELI 120
EAI AQT LQ F SFE VF+ H++N I GYT D ALQRR QDIVNA++++
Sbjct: 443 --------EAIGAQTMLQVFQSFEFVFLLHMMNEIFGYTSDFCNALQRREQDIVNAMDIL 494
Query: 121 VLTKMQLEMLRQDDGWENFLKKVTSF 146
TK + ++LR+D GW+ FL KVTSF
Sbjct: 495 EFTKAEFDVLREDCGWKEFLGKVTSF 520
>Os02g0234000 Conserved hypothetical protein
Length = 949
Score = 127 bits (318), Expect = 3e-30, Method: Composition-based stats.
Identities = 68/133 (51%), Positives = 88/133 (66%), Gaps = 1/133 (0%)
Query: 14 GEIESGQGLNQEMGLGRPGDTRWGSHYKTVQHILIMYRSIRKVLLQVGKDRSQSTEAIKA 73
G +++G GLNQE L RPGDTRW SHYKT++ +L M+ +I KVL V KD T +A
Sbjct: 415 GMLQTGTGLNQEQCLQRPGDTRWSSHYKTLKSLLDMFPTIVKVLEFVEKDDKDRTNRDQA 474
Query: 74 QTALQSFVSFEIVFMAHLLNTILGYTDDLNTALQRRAQDIVNAVELIVLTKMQLEMLRQD 133
L F SFE VF HL++TIL T+ L+ ALQR+ QDIVNAV+ + T+ L+ LR+
Sbjct: 475 NGLLVYFQSFEFVFYLHLMSTILIITNTLSLALQRKDQDIVNAVKCVKSTRCHLDDLRR- 533
Query: 134 DGWENFLKKVTSF 146
DGWEN L V +F
Sbjct: 534 DGWENLLGDVYAF 546
>Os08g0448400
Length = 743
Score = 123 bits (308), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 66/141 (46%), Positives = 92/141 (65%), Gaps = 1/141 (0%)
Query: 7 IVEALELGEIESGQGLNQEMGLGRPGDTRWGSHYKTVQHILIMYRSIRKVLLQVGKDRSQ 66
++E +E GEI +G+GLNQE L RPGDTRWGSH KT+ IL+M+ +I VL V KD ++
Sbjct: 455 LLEKVENGEITTGRGLNQESSLARPGDTRWGSHLKTLLRILVMWEAIIDVLEIVKKDSTK 514
Query: 67 STEAIKAQTALQSFVSFEIVFMAHLLNTILGYTDDLNTALQRRAQDIVNAVELIVLTKMQ 126
T A + SF+ VF+ HL+ +L TDDL+ ALQR+ QDIV A+ L++ K
Sbjct: 515 PTFNGGAFGLMGKMQSFDFVFIMHLMIDMLSITDDLSRALQRKDQDIVEAMSLLIDVKEL 574
Query: 127 LEMLRQDDGWENFLKKVTSFL 147
L+ +R+ +GWE L +V SF
Sbjct: 575 LQDMRE-NGWEPLLNRVISFC 594
>Os01g0293600 Zinc finger, TTF-type domain containing protein
Length = 798
Score = 123 bits (308), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 66/141 (46%), Positives = 92/141 (65%), Gaps = 1/141 (0%)
Query: 7 IVEALELGEIESGQGLNQEMGLGRPGDTRWGSHYKTVQHILIMYRSIRKVLLQVGKDRSQ 66
++E +E GEI +G+GLNQE L RPGDTRWGSH KT+ IL+M+ +I VL V KD ++
Sbjct: 431 LLEKVENGEITTGRGLNQESSLARPGDTRWGSHLKTLLRILVMWEAIIDVLEIVKKDSTK 490
Query: 67 STEAIKAQTALQSFVSFEIVFMAHLLNTILGYTDDLNTALQRRAQDIVNAVELIVLTKMQ 126
T A + SF+ VF+ HL+ +L TDDL+ ALQR+ QDIV A+ L++ K
Sbjct: 491 PTFNGGAFGLMGKMQSFDFVFIMHLMIDMLSITDDLSRALQRKDQDIVEAMSLLIDVKEL 550
Query: 127 LEMLRQDDGWENFLKKVTSFL 147
L+ +R+ +GWE L +V SF
Sbjct: 551 LQDMRE-NGWEPLLNRVISFC 570
>Os09g0314366
Length = 798
Score = 123 bits (308), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 66/141 (46%), Positives = 92/141 (65%), Gaps = 1/141 (0%)
Query: 7 IVEALELGEIESGQGLNQEMGLGRPGDTRWGSHYKTVQHILIMYRSIRKVLLQVGKDRSQ 66
++E +E GEI +G+GLNQE L RPGDTRWGSH KT+ IL+M+ +I VL V KD ++
Sbjct: 431 LLEKVENGEITTGRGLNQESSLARPGDTRWGSHLKTLLRILVMWEAIIDVLEIVKKDSTK 490
Query: 67 STEAIKAQTALQSFVSFEIVFMAHLLNTILGYTDDLNTALQRRAQDIVNAVELIVLTKMQ 126
T A + SF+ VF+ HL+ +L TDDL+ ALQR+ QDIV A+ L++ K
Sbjct: 491 PTFNGGAFGLMGKMQSFDFVFIMHLMIDMLSITDDLSRALQRKDQDIVEAMSLLIDVKEL 550
Query: 127 LEMLRQDDGWENFLKKVTSFL 147
L+ +R+ +GWE L +V SF
Sbjct: 551 LQDMRE-NGWEPLLNRVISFC 570
>Os02g0654633
Length = 768
Score = 121 bits (304), Expect = 2e-28, Method: Composition-based stats.
Identities = 65/142 (45%), Positives = 89/142 (62%), Gaps = 1/142 (0%)
Query: 5 QEIVEALELGEIESGQGLNQEMGLGRPGDTRWGSHYKTVQHILIMYRSIRKVLLQVGKDR 64
+++ +AL G++E+G GLNQE L RPGDTRW SHYKT++ +L M+ +I +VL V KD
Sbjct: 409 EQVQQALGCGQLETGTGLNQEQCLQRPGDTRWSSHYKTLKSLLNMFPTIVQVLKVVEKDD 468
Query: 65 SQSTEAIKAQTALQSFVSFEIVFMAHLLNTILGYTDDLNTALQRRAQDIVNAVELIVLTK 124
+A L F SF+ VF HL+ T L T+ L+ ALQR+ QDIVNA+ + TK
Sbjct: 469 RDWKNRDQASNLLVYFQSFDFVFYLHLMLTTLAATNTLSQALQRKDQDIVNAIGCLKSTK 528
Query: 125 MQLEMLRQDDGWENFLKKVTSF 146
+ L+ LR +GWE L V F
Sbjct: 529 LHLDDLRT-NGWEKLLDDVNQF 549
>Os02g0599175 HAT dimerisation domain containing protein
Length = 685
Score = 119 bits (298), Expect = 8e-28, Method: Composition-based stats.
Identities = 63/142 (44%), Positives = 95/142 (66%), Gaps = 1/142 (0%)
Query: 5 QEIVEALELGEIESGQGLNQEMGLGRPGDTRWGSHYKTVQHILIMYRSIRKVLLQVGKDR 64
+E+ +AL G++++ GLNQE L RPGDTRW SHYKT++ ++ M+ +I KVL V KD+
Sbjct: 327 KEMSKALGCGQLQTRTGLNQEQCLQRPGDTRWSSHYKTLKSLVGMFATIVKVLEIVEKDK 386
Query: 65 SQSTEAIKAQTALQSFVSFEIVFMAHLLNTILGYTDDLNTALQRRAQDIVNAVELIVLTK 124
+ +A L+ F SF+ VF HL+ TIL T+ L+ ALQR+ QDIVNA++ + T+
Sbjct: 387 NDWKIRDQASNLLEYFQSFDFVFYLHLMLTILTITNSLSLALQRKDQDIVNAMKCVKSTR 446
Query: 125 MQLEMLRQDDGWENFLKKVTSF 146
+ L+ LR++ WE L +V+ F
Sbjct: 447 LNLDELRREK-WEKVLDEVSDF 467
>Os04g0229000
Length = 721
Score = 118 bits (296), Expect = 1e-27, Method: Composition-based stats.
Identities = 62/142 (43%), Positives = 94/142 (66%), Gaps = 1/142 (0%)
Query: 5 QEIVEALELGEIESGQGLNQEMGLGRPGDTRWGSHYKTVQHILIMYRSIRKVLLQVGKDR 64
+E+ +AL G++++G LNQE L RPGDTRW SHYKT++ ++ M+ +I KVL V KD+
Sbjct: 290 KEMSKALGSGQLQTGTRLNQEQCLQRPGDTRWSSHYKTLKSLVGMFATIVKVLEIVEKDK 349
Query: 65 SQSTEAIKAQTALQSFVSFEIVFMAHLLNTILGYTDDLNTALQRRAQDIVNAVELIVLTK 124
+ + L+ F SF+ VF HL+ TIL T+ L+ ALQR+ QDIVNA++ + T+
Sbjct: 350 NDWKIRDQGSNLLEYFQSFDFVFYLHLMLTILTITNSLSLALQRKDQDIVNAMKCVKSTR 409
Query: 125 MQLEMLRQDDGWENFLKKVTSF 146
+ L+ LR++ WE L +V+ F
Sbjct: 410 LNLDELRREK-WEKVLDEVSDF 430
>Os12g0191900
Length = 334
Score = 113 bits (283), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 65/146 (44%), Positives = 90/146 (61%), Gaps = 4/146 (2%)
Query: 1 VAQAQEIVEALELGEIESGQGLNQEMGLGRPGDTRWGSHYKTVQHILIMYRSIRKVLLQV 60
+A + + E +E GEI + GLNQE L RPGDTRWGSH+KT+ IL+M+ +I VL V
Sbjct: 128 IALKEALFEKVENGEITTRSGLNQESSLARPGDTRWGSHFKTLFRILVMWEAIIDVLEIV 187
Query: 61 GKDRSQSTEAIKAQTALQSFVSFEIVFMAHLLNTILGYTDDLNTALQRRAQDIVNAVELI 120
KD ++ T A + F+ VF+ HL+ +L TDDL+ ALQR+ QDIV A+ L+
Sbjct: 188 RKDSTKPTFNGGAFGLMGKMQRFDFVFIMHLVIDMLSITDDLSRALQRKDQDIVEAMSLL 247
Query: 121 VLTKMQLEMLRQDDGWENFLKKVTSF 146
K E+L Q++GWE L + SF
Sbjct: 248 KDVK---ELL-QENGWEPLLNRGISF 269
>Os11g0247800 Zinc finger, TTF-type domain containing protein
Length = 1050
Score = 109 bits (272), Expect = 8e-25, Method: Composition-based stats.
Identities = 59/147 (40%), Positives = 90/147 (61%), Gaps = 7/147 (4%)
Query: 4 AQE----IVEALELGEIESGQGLNQEMGLGRPGDTRWGSHYKTVQHILIMYRSIRKVLLQ 59
AQE +V +LE GEI SG+G NQ L RPGDTRWGSH+KT+ + M++++ +VL
Sbjct: 661 AQEHHDNLVSSLETGEIFSGRGKNQATNLARPGDTRWGSHHKTLCRLQHMWKAVLEVLEN 720
Query: 60 VGKDRSQSTEAIKAQTALQSFVSFEIVFMAHLLNTILGYTDDLNTALQRRAQDIVNAVEL 119
+ +D T I A L+ SFE V + HL+ +LG T+DL+ LQ++ Q+I+ A+ L
Sbjct: 721 ICED--NPTTKITATGLLKQMESFEFVLIMHLMIRLLGKTNDLSQCLQKKDQNIIRAIGL 778
Query: 120 IVLTKMQLEMLRQDDGWENFLKKVTSF 146
I T ++ +RQ GW+ ++ +F
Sbjct: 779 IGTTLQKINHIRQ-HGWQELFEETKTF 804
>Os01g0181400
Length = 833
Score = 107 bits (267), Expect = 3e-24, Method: Composition-based stats.
Identities = 57/143 (39%), Positives = 86/143 (60%), Gaps = 1/143 (0%)
Query: 4 AQEIVEALELGEIESGQGLNQEMGLGRPGDTRWGSHYKTVQHILIMYRSIRKVLLQVGKD 63
A+ + +ALE G + +G GLNQE+ L RPGDTRW SHYKT++ ++ ++ + KVL V ++
Sbjct: 472 AEHVHDALECGLLITGSGLNQEISLQRPGDTRWSSHYKTLKSLVQLFPTTVKVLEYVEEN 531
Query: 64 RSQSTEAIKAQTALQSFVSFEIVFMAHLLNTILGYTDDLNTALQRRAQDIVNAVELIVLT 123
+ +A L F F+ VF L+ IL T+ + LQR+ QDIVNAV + T
Sbjct: 532 DRDDKNSRQAAGLLVYFQLFQFVFYLQLMLNILAITNTFSVTLQRKDQDIVNAVNCVKST 591
Query: 124 KMQLEMLRQDDGWENFLKKVTSF 146
+ L+ R+ GWE+ L +V +F
Sbjct: 592 RNHLDEFRR-SGWESILAEVHNF 613
>Os12g0528500 Winged helix repressor DNA-binding domain containing protein
Length = 422
Score = 107 bits (267), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 89/145 (61%), Gaps = 17/145 (11%)
Query: 3 QAQEIVEALELGEIESGQGLNQEMGLGRPGDTRWGSHYKTVQHILIMYRSIRKVLLQVGK 62
QA+ + EAL+LGE+ +G+GLNQE+GL R GDTRWGSH+ ++ ++++M+ S+ +V+ +
Sbjct: 219 QAKIVEEALQLGELGTGRGLNQELGLKRAGDTRWGSHFNSLLNMIVMFPSVVEVIDDIAH 278
Query: 63 DRSQSTEAIKAQTALQSFVSFEIVFMAHLLNTILGYTDDLNTALQRRAQDIVNAVELIVL 122
+ S++ + +KA+ L + +F+ FM HL+ + QDIV A+ +
Sbjct: 279 NGSKAVDRLKAKGVLDAIQTFDFSFMLHLM----------------KDQDIVKAISYLGT 322
Query: 123 TKMQLEMLRQDDGWENFLKKVTSFL 147
TK +L+ LR +DGWE KV F
Sbjct: 323 TKRRLQDLR-NDGWEGMFNKVIDFC 346
>Os11g0247900
Length = 1071
Score = 105 bits (263), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 55/141 (39%), Positives = 86/141 (60%), Gaps = 3/141 (2%)
Query: 7 IVEALELGEIESGQGLNQEMGLGRPGDTRWGSHYKTVQHILIMYRSIRKVLLQVGKDRSQ 66
+V +LE GEI SG+G NQ L RPGDTRWGSH+KT+ + M++++ +VL + +D
Sbjct: 492 LVSSLETGEIFSGRGKNQATNLARPGDTRWGSHHKTLCRLQHMWKAVLEVLENICED--N 549
Query: 67 STEAIKAQTALQSFVSFEIVFMAHLLNTILGYTDDLNTALQRRAQDIVNAVELIVLTKMQ 126
T A L+ SFE V + HL+ +LG T+DL+ LQ++ Q+I+ A+ LI T +
Sbjct: 550 PTTKTTATGLLKQMESFEFVLIMHLMIRLLGKTNDLSQCLQKKDQNIIRAIGLIGTTLQK 609
Query: 127 LEMLRQDDGWENFLKKVTSFL 147
+ +RQ GW+ ++ +F
Sbjct: 610 INHIRQ-HGWQELFEETKTFC 629
>Os02g0463100
Length = 206
Score = 80.9 bits (198), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 62/105 (59%)
Query: 5 QEIVEALELGEIESGQGLNQEMGLGRPGDTRWGSHYKTVQHILIMYRSIRKVLLQVGKDR 64
+E+ ++L G I++G GL QE L R GDTRW SHYKT++ ++ M+ +I KVL D
Sbjct: 101 EEVAKSLGCGLIQTGSGLTQEQCLKRLGDTRWSSHYKTLKSLVDMFPTIVKVLEYASNDE 160
Query: 65 SQSTEAIKAQTALQSFVSFEIVFMAHLLNTILGYTDDLNTALQRR 109
+ +A L F SF+ F HL+ T L T+ L+ A+QR+
Sbjct: 161 RDGSHRDQANGLLVYFQSFDFAFYLHLMLTTLMITNTLSLAMQRK 205
>Os08g0333600
Length = 462
Score = 75.9 bits (185), Expect = 9e-15, Method: Composition-based stats.
Identities = 33/44 (75%), Positives = 39/44 (88%)
Query: 4 AQEIVEALELGEIESGQGLNQEMGLGRPGDTRWGSHYKTVQHIL 47
AQ+I+EALE+GEIESG GLNQEMGL RPGDTRWGSH T+ +I+
Sbjct: 393 AQKIMEALEMGEIESGVGLNQEMGLARPGDTRWGSHCLTILYII 436
>Os02g0301400 Thioredoxin-like fold domain containing protein
Length = 505
Score = 75.9 bits (185), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 79/143 (55%), Gaps = 4/143 (2%)
Query: 5 QEIVEALELGEIESGQGLNQEMGLGRPGDTRWGSHYKTVQHILIMYRSIRKVLLQVGKDR 64
Q + LE GEI S ++E L G TRWGS+Y T+ I +M+ S+ VL+ V +
Sbjct: 339 QTTLNKLESGEILSEGSNHKEKNLASLGGTRWGSYYTTLGRINMMWDSVLDVLMIVHQHG 398
Query: 65 SQSTEAIKAQTALQSFVSFEIVFMAHLLNTILGYTDDLNTALQRRAQDIVNAVELIVLTK 124
Q + +A +Q+ SFE VF+ ++ + T++L+ LQR+ + I+ AV + K
Sbjct: 399 RQPS---RAGGLIQTMESFEFVFILKMMLKLFTITNELSLVLQRKDEGIIQAVGQLTDVK 455
Query: 125 MQLEMLRQDDGWENFLKKVTSFL 147
L+ LR ++GWE+ + V SF
Sbjct: 456 ECLQTLR-NNGWESLFEDVKSFC 477
>Os05g0194700
Length = 717
Score = 70.5 bits (171), Expect = 4e-13, Method: Composition-based stats.
Identities = 43/141 (30%), Positives = 74/141 (52%), Gaps = 1/141 (0%)
Query: 6 EIVEALELGEIESGQGLNQEMGLGRPGDTRWGSHYKTVQHILIMYRSIRKVLLQVGKDRS 65
+I E + G+ G++ E L P TRWGS+ T+ ++L M+ + L+ +
Sbjct: 362 KIREKIVRGDALPKIGMHPENDLSGPAHTRWGSYSTTLLNLLTMWDVVLDTLVTMCDKGI 421
Query: 66 QSTEAIKAQTALQSFVSFEIVFMAHLLNTILGYTDDLNTALQRRAQDIVNAVELIVLTKM 125
++ SFE VF+ HL+ +L +TDDL+ L+R+ + IVN +ELI K
Sbjct: 422 YPEPGSIPSDMIEQMESFEFVFVLHLMIRVLIWTDDLSCLLERKGKYIVNPLELITSVKN 481
Query: 126 QLEMLRQDDGWENFLKKVTSF 146
L+ L+++ W + L++V F
Sbjct: 482 ILQDLKENQ-WVDLLEEVKRF 501
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.320 0.134 0.371
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 3,942,252
Number of extensions: 125954
Number of successful extensions: 348
Number of sequences better than 1.0e-10: 27
Number of HSP's gapped: 336
Number of HSP's successfully gapped: 27
Length of query: 147
Length of database: 17,035,801
Length adjustment: 91
Effective length of query: 56
Effective length of database: 12,284,327
Effective search space: 687922312
Effective search space used: 687922312
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 151 (62.8 bits)