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Os09g0290900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.4 (0.0225) R2 : 0.595
β1 : -1.57 (0.0823) R2dD : 0.335 R2D : 0.325
β2 : 0.939 (0.0539) R2dC : 0.27 R2C : 0.262
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0147 (0.048) R2dN8 : 0.000111 R2N8 : -0.00324
σ : 0.423
deviance : 81.51
__
_____
C
peak time of C : 22.6
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
71.84 0.398 10.4 -1.68 1.05 -1.41 0.612 1.5 -0.0763 2.66 1.59 783 -- --
73.45 0.399 10.4 -1.61 1.06 -1.54 1.1 -- -0.0425 3.08 1.427 802 -- --
72.8 0.397 10.4 -1.72 1.04 -1.4 -- 1.93 -0.0867 2.66 1.35 792 -- --
77.63 0.41 10.4 -1.65 1.02 -1.38 -- -- -0.0687 2.7 1.306 804 -- --
86.95 0.437 10.4 -1.55 -- 0.657 -- 0.107 0.00833 -- 1.35 792 -- --
81.44 0.423 10.4 -1.57 0.939 -- 0.128 -- -0.0145 22.6 -- -- -- --
81.51 0.423 10.4 -1.57 0.939 -- -- -- -0.0147 22.6 -- -- -- --
87.03 0.436 10.4 -1.55 -- 0.657 -- -- 0.00869 -- 1.35 792 -- --
143.62 0.561 10.4 -- 0.559 0.337 -- -- 0.173 21.7 1.306 804 -- --
135.71 0.544 10.4 -1.55 -- -- -- -- -0.0102 -- -- -- -- --
146.49 0.566 10.4 -- 0.928 -- -- -- 0.16 22.5 -- -- -- --
144.93 0.563 10.4 -- -- 0.704 -- -- 0.202 -- 0.009972 7482 -- --
199.32 0.659 10.4 -- -- -- -- -- 0.162 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 68.11 humidity 60.0 14400 > th dose independent rect. 20 10
2 68.69 humidity 70.0 90 > th dose independent rect. 17 12
3 68.78 temperature 15.0 90 > th dose dependent rect. 21 8
4 68.86 humidity 50.0 4320 > th dose independent rect. 6 4
6 68.90 wind 5.0 90 < th dose independent rect. 17 12
7 68.94 wind 9.0 90 < th dose dependent rect. 17 12
8 68.95 radiation 20.0 14400 < th dose independent rect. 20 10
12 69.29 humidity 70.0 90 > th dose independent rect. 15 14
13 69.32 humidity 70.0 90 > th dose dependent rect. 5 4
14 69.36 wind 7.0 720 < th dose independent rect. 16 3
16 69.44 precipitation 0.1 720 < th dose independent rect. 7 21
17 69.44 precipitation 0.1 720 < th dose dependent rect. 7 21
20 69.59 wind 5.0 720 < th dose independent rect. 22 6
21 69.60 wind 9.0 720 < th dose independent rect. 7 12
25 69.63 wind 1.0 270 > th dose independent rect. 4 2
30 69.84 radiation 30.0 90 < th dose dependent rect. 5 3
31 69.86 temperature 10.0 1440 > th dose independent rect. 6 4
34 69.86 atmosphere 995.0 1440 > th dose independent rect. 6 4
35 69.86 atmosphere 1015.0 1440 < th dose independent rect. 6 4
36 69.86 temperature 10.0 1440 > th dose independent rect. 10 20
40 69.88 wind 9.0 4320 < th dose independent rect. 6 3
45 69.91 wind 9.0 720 < th dose dependent rect. 22 6
46 69.92 radiation 20.0 14400 < th dose independent rect. 22 8
68 70.06 humidity 80.0 90 > th dose independent rect. 5 3
73 70.12 humidity 50.0 270 > th dose independent rect. 7 20
74 70.12 atmosphere 1015.0 90 < th dose dependent rect. 5 2
80 70.22 precipitation 0.1 720 < th dose independent rect. 7 12
81 70.22 precipitation 0.1 720 < th dose dependent rect. 7 12
83 70.23 humidity 50.0 720 > th dose dependent rect. 19 12
90 70.28 humidity 50.0 720 > th dose dependent rect. 19 4
91 70.30 radiation 1.0 720 < th dose independent rect. 16 8
93 70.30 radiation 1.0 720 < th dose dependent rect. 16 8
94 70.35 radiation 20.0 90 < th dose independent rect. 5 3
100 70.40 humidity 50.0 270 > th dose independent rect. 14 13
105 70.41 humidity 70.0 720 > th dose independent rect. 19 12
108 70.43 wind 7.0 90 < th dose independent rect. 5 2
110 70.43 temperature 10.0 90 > th dose independent rect. 5 2
112 70.43 temperature 30.0 90 < th dose independent rect. 5 2
113 70.43 humidity 50.0 90 > th dose independent rect. 5 2
115 70.43 atmosphere 995.0 90 > th dose independent rect. 5 2
116 70.43 atmosphere 1015.0 90 < th dose independent rect. 5 2
119 70.43 temperature 10.0 90 > th dose independent rect. 7 22
122 70.46 precipitation 0.1 90 < th dose independent rect. 5 2
123 70.46 precipitation 0.1 90 < th dose dependent rect. 5 2
124 70.47 atmosphere 995.0 720 > th dose independent rect. 19 21
125 70.47 humidity 60.0 270 > th dose dependent rect. 3 4
128 70.47 temperature 10.0 270 > th dose dependent rect. 18 9
129 70.48 humidity 70.0 14400 > th dose independent rect. 22 8
132 70.48 precipitation 0.1 90 < th dose independent rect. 7 22
133 70.48 precipitation 0.1 90 < th dose dependent rect. 7 22
145 70.55 precipitation 0.1 720 < th dose independent rect. 16 18
147 70.55 precipitation 0.1 720 < th dose dependent rect. 16 18
151 70.57 humidity 80.0 270 > th dose independent rect. 3 4
153 70.57 radiation 20.0 270 < th dose dependent rect. 3 4
159 70.61 precipitation 0.1 720 < th dose independent rect. 16 9
161 70.61 precipitation 0.1 720 < th dose dependent rect. 16 9
163 70.62 wind 1.0 90 > th dose independent rect. 4 4
166 70.62 humidity 50.0 30 > th dose independent rect. 9 20
169 70.63 humidity 50.0 270 > th dose independent rect. 7 12
170 70.64 temperature 20.0 270 > th dose independent rect. 3 3
177 70.66 precipitation 0.1 720 < th dose independent rect. 15 14
179 70.66 precipitation 0.1 720 < th dose dependent rect. 15 14
180 70.67 radiation 20.0 720 < th dose independent rect. 19 12
181 70.67 wind 9.0 720 < th dose independent rect. 7 21
187 70.69 temperature 10.0 720 > th dose independent rect. 7 12
188 70.69 temperature 10.0 720 > th dose independent rect. 19 12
189 70.69 temperature 30.0 720 < th dose independent rect. 19 12
190 70.69 humidity 50.0 720 > th dose independent rect. 19 12
191 70.69 atmosphere 995.0 720 > th dose independent rect. 19 12
192 70.69 atmosphere 1015.0 720 < th dose independent rect. 7 12
199 70.73 radiation 20.0 270 < th dose independent rect. 3 4
205 70.74 temperature 30.0 90 < th dose dependent rect. 5 2
208 70.75 radiation 1.0 270 < th dose independent rect. 4 2
210 70.75 atmosphere 995.0 90 > th dose independent rect. 7 22
214 70.77 wind 9.0 90 < th dose independent rect. 7 22
228 70.80 precipitation 0.1 720 < th dose independent rect. 21 7
230 70.80 precipitation 0.1 720 < th dose dependent rect. 21 7
238 70.82 wind 9.0 90 < th dose dependent rect. 5 2
252 70.87 wind 9.0 270 < th dose independent rect. 3 3
253 70.87 temperature 10.0 270 > th dose independent rect. 3 3
255 70.87 temperature 30.0 270 < th dose independent rect. 3 3
256 70.87 humidity 50.0 270 > th dose independent rect. 3 3
259 70.87 atmosphere 995.0 270 > th dose independent rect. 3 3
260 70.87 atmosphere 1015.0 270 < th dose independent rect. 3 3
269 70.89 precipitation 0.1 720 < th dose independent rect. 16 3
271 70.89 precipitation 0.1 720 < th dose dependent rect. 16 3
273 70.89 humidity 50.0 90 > th dose dependent rect. 17 12
285 70.90 temperature 10.0 270 > th dose dependent rect. 4 2
293 70.92 wind 9.0 720 < th dose independent rect. 19 12
310 70.95 temperature 30.0 1440 < th dose independent rect. 6 2
331 70.96 humidity 50.0 270 > th dose independent rect. 7 10
333 70.96 precipitation 0.1 720 < th dose independent rect. 13 15
337 70.96 precipitation 0.1 720 < th dose dependent rect. 13 15
349 71.00 temperature 25.0 720 < th dose independent rect. 16 8
350 71.00 temperature 30.0 270 < th dose independent rect. 7 20
357 71.02 radiation 1.0 720 > th dose independent rect. 7 12
398 71.04 atmosphere 1000.0 270 > th dose independent rect. 16 15
406 71.06 precipitation 0.1 270 < th dose independent rect. 3 3
409 71.06 temperature 25.0 720 < th dose independent rect. 17 6
412 71.06 precipitation 0.1 270 < th dose dependent rect. 3 3
426 71.10 temperature 25.0 720 < th dose independent rect. 19 2
441 71.13 temperature 10.0 720 > th dose dependent rect. 16 3
465 71.16 humidity 90.0 720 > th dose dependent rect. 20 3
471 71.17 atmosphere 1015.0 90 < th dose independent rect. 7 22
484 71.19 temperature 25.0 720 < th dose independent rect. 18 4
527 71.24 wind 1.0 720 > th dose independent rect. 16 3
535 71.26 wind 1.0 10 > th dose independent rect. 5 4
547 71.28 radiation 20.0 90 < th dose dependent rect. 17 12
554 71.30 radiation 10.0 90 < th dose independent rect. 17 12
559 71.30 humidity 90.0 720 > th dose dependent rect. 20 1
567 71.32 wind 1.0 270 > th dose independent rect. 7 19
601 71.37 radiation 1.0 720 < th dose dependent sin 15 NA
606 71.38 temperature 25.0 720 > th dose independent rect. 17 2
614 71.39 wind 7.0 720 < th dose independent rect. 17 17
615 71.39 radiation 40.0 720 < th dose independent rect. 16 18
675 71.44 temperature 30.0 90 < th dose independent rect. 18 11
683 71.45 radiation 1.0 720 > th dose independent rect. 15 4
699 71.46 temperature 15.0 90 > th dose independent rect. 5 12
702 71.47 radiation 1.0 720 < th dose independent sin 15 NA
721 71.50 radiation 40.0 720 < th dose dependent rect. 19 12
726 71.51 humidity 50.0 90 > th dose independent rect. 17 12
778 71.56 radiation 10.0 30 < th dose dependent sin 11 NA
782 71.57 temperature 15.0 720 > th dose independent rect. 19 21
785 71.58 radiation 1.0 720 > th dose independent sin 16 NA
807 71.62 atmosphere 1015.0 270 < th dose dependent rect. 3 3
829 71.64 temperature 25.0 270 < th dose independent rect. 16 15
896 71.73 temperature 30.0 270 < th dose independent rect. 7 9
926 71.75 temperature 10.0 90 > th dose independent rect. 17 12
927 71.75 atmosphere 1015.0 90 < th dose independent rect. 5 12
937 71.76 temperature 25.0 720 < th dose independent sin 15 NA
959 71.79 wind 1.0 720 > th dose independent rect. 10 6
962 71.79 wind 9.0 90 < th dose dependent rect. 21 8
964 71.79 wind 9.0 270 < th dose dependent rect. 23 12
994 71.83 radiation 10.0 720 < th dose independent rect. 17 2
1000 71.83 atmosphere 1015.0 30 < th dose dependent rect. 5 4