Os11g0247800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Zinc finger, TTF-type domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os11g0247800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Zinc finger, TTF-type domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 60.26 | 0.365 | 3.03 | 0.0151 | 0.166 | 0.638 | -0.0194 | -2.02 | 0.0581 | 9.25 | 0.4138 | 3140 | -- | -- |
| 62.73 | 0.369 | 3.01 | -0.0116 | 0.17 | 0.414 | -0.0644 | -- | 0.0577 | 9.4 | 0.47 | 3290 | -- | -- |
| 60.25 | 0.362 | 3.03 | 0.015 | 0.166 | 0.641 | -- | -2.02 | 0.0576 | 9.21 | 0.4196 | 3171 | -- | -- |
| 62.73 | 0.369 | 3.01 | -0.0241 | 0.178 | 0.411 | -- | -- | 0.0511 | 9.63 | 0.48 | 3293 | -- | -- |
| 61.84 | 0.366 | 3.03 | 0.0137 | -- | 0.669 | -- | -2.1 | 0.0616 | -- | 0.4393 | 3180 | -- | -- |
| 64.36 | 0.376 | 3.01 | 0.0528 | 0.182 | -- | -0.105 | -- | 0.0238 | 9.65 | -- | -- | -- | -- |
| 64.4 | 0.376 | 3.01 | 0.0488 | 0.182 | -- | -- | -- | 0.0236 | 9.62 | -- | -- | -- | -- |
| 64.6 | 0.374 | 3.01 | -0.0276 | -- | 0.422 | -- | -- | 0.0525 | -- | 0.463 | 3290 | -- | -- |
| 62.75 | 0.369 | 3.01 | -- | 0.178 | 0.4 | -- | -- | 0.0527 | 9.63 | 0.4772 | 3290 | -- | -- |
| 66.36 | 0.381 | 3.02 | 0.0473 | -- | -- | -- | -- | 0.024 | -- | -- | -- | -- | -- |
| 64.46 | 0.376 | 3.01 | -- | 0.182 | -- | -- | -- | 0.0182 | 9.6 | -- | -- | -- | -- |
| 64.62 | 0.374 | 3.01 | -- | -- | 0.412 | -- | -- | 0.0563 | -- | 0.4979 | 3290 | -- | -- |
| 66.42 | 0.38 | 3.02 | -- | -- | -- | -- | -- | 0.0187 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 59.33 | temperature | 20.0 | 270 | < th | dose independent | rect. | 9 | 1 |
| 4 | 60.39 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 21 | 1 |
| 5 | 60.39 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 21 | 1 |
| 6 | 60.39 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 7 | 60.42 | wind | 1.0 | 720 | < th | dose dependent | rect. | 4 | 1 |
| 8 | 60.45 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 9 | 1 |
| 9 | 60.45 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 9 | 1 |
| 10 | 60.49 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 9 | 1 |
| 11 | 60.49 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 9 | 1 |
| 16 | 60.52 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 21 | 1 |
| 19 | 60.56 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 11 | 1 |
| 20 | 60.56 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 11 | 1 |
| 22 | 60.57 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 11 | 1 |
| 24 | 60.57 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 11 | 1 |
| 33 | 60.66 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 16 | 1 |
| 35 | 60.67 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 16 | 1 |
| 41 | 60.70 | wind | 1.0 | 4320 | < th | dose dependent | rect. | 19 | 1 |
| 42 | 60.72 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 16 | 1 |
| 43 | 60.72 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 16 | 1 |
| 62 | 60.87 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 8 | 4 |
| 64 | 60.87 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 8 | 4 |
| 68 | 60.87 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 8 | 4 |
| 69 | 60.87 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 8 | 4 |
| 80 | 60.93 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 4 | 2 |
| 99 | 60.97 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 16 | 3 |
| 106 | 61.01 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 16 | 3 |
| 107 | 61.01 | atmosphere | 995.0 | 14400 | < th | dose dependent | sin | 6 | NA |
| 109 | 61.01 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 16 | 3 |
| 117 | 61.03 | atmosphere | 995.0 | 14400 | < th | dose dependent | rect. | 21 | 18 |
| 122 | 61.04 | atmosphere | 995.0 | 14400 | < th | dose dependent | sin | 10 | NA |
| 128 | 61.05 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 16 | 3 |
| 134 | 61.08 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 9 | 1 |
| 135 | 61.08 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 18 | 1 |
| 139 | 61.09 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 20 | 17 |
| 146 | 61.10 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 19 | 11 |
| 160 | 61.13 | atmosphere | 995.0 | 14400 | < th | dose independent | sin | 8 | NA |
| 170 | 61.13 | atmosphere | 995.0 | 14400 | < th | dose dependent | rect. | 18 | 9 |
| 189 | 61.15 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 23 | 1 |
| 190 | 61.15 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 18 | 1 |
| 191 | 61.15 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 20 | 4 |
| 198 | 61.15 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 18 | 1 |
| 201 | 61.16 | atmosphere | 995.0 | 14400 | < th | dose independent | rect. | 1 | 1 |
| 206 | 61.16 | atmosphere | 995.0 | 14400 | < th | dose independent | rect. | 21 | 1 |
| 355 | 61.16 | atmosphere | 995.0 | 14400 | < th | dose dependent | rect. | 1 | 1 |
| 360 | 61.16 | atmosphere | 995.0 | 14400 | < th | dose dependent | rect. | 21 | 1 |
| 517 | 61.17 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 19 | 14 |
| 524 | 61.18 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 21 | 1 |
| 564 | 61.21 | wind | 1.0 | 4320 | < th | dose independent | rect. | 19 | 1 |
| 580 | 61.22 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 18 | 1 |
| 616 | 61.27 | wind | 1.0 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 637 | 61.31 | atmosphere | 995.0 | 14400 | > th | dose independent | sin | 8 | NA |
| 641 | 61.31 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 8 | 11 |
| 642 | 61.31 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 8 | 11 |
| 644 | 61.31 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 8 | 11 |
| 652 | 61.33 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 8 | 11 |
| 664 | 61.37 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 8 | 15 |
| 665 | 61.37 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 8 | 15 |
| 669 | 61.37 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 8 | 15 |
| 690 | 61.40 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 10 | 9 |
| 696 | 61.40 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 10 | 9 |
| 711 | 61.41 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 8 | 14 |
| 766 | 61.46 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 16 | 2 |
| 776 | 61.46 | atmosphere | 1000.0 | 10 | < th | dose dependent | rect. | 16 | 2 |
| 791 | 61.47 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 15 | 8 |
| 810 | 61.48 | humidity | 90.0 | 720 | < th | dose independent | rect. | 1 | 6 |
| 812 | 61.48 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 15 | 8 |
| 819 | 61.48 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 15 | 8 |
| 842 | 61.50 | wind | 1.0 | 4320 | > th | dose independent | rect. | 19 | 1 |
| 843 | 61.50 | wind | 9.0 | 14400 | > th | dose independent | rect. | 23 | 2 |
| 854 | 61.50 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 16 | 6 |
| 929 | 61.54 | precipitation | 0.1 | 4320 | > th | dose independent | sin | 21 | NA |
| 931 | 61.54 | precipitation | 0.1 | 4320 | < th | dose independent | sin | 21 | NA |
| 938 | 61.54 | precipitation | 0.1 | 4320 | < th | dose dependent | sin | 21 | NA |
| 960 | 61.55 | precipitation | 0.1 | 4320 | > th | dose dependent | sin | 21 | NA |
| 973 | 61.55 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 16 | 21 |
| 984 | 61.56 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 21 | 16 |
| 997 | 61.57 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 23 | 2 |