BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os08g0495200 Os08g0495200|Os08g0495200
(227 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os08g0495200 Conserved hypothetical protein 479 e-136
Os08g0495300 Conserved hypothetical protein 176 9e-45
Os06g0134300 Conserved hypothetical protein 161 4e-40
Os06g0136100 Conserved hypothetical protein 152 2e-37
Os06g0133700 114 7e-26
Os06g0134400 Conserved hypothetical protein 110 8e-25
Os06g0134500 Conserved hypothetical protein 105 4e-23
Os08g0494400 Conserved hypothetical protein 81 7e-16
Os10g0494950 Conserved hypothetical protein 72 2e-13
>Os08g0495200 Conserved hypothetical protein
Length = 227
Score = 479 bits (1234), Expect = e-136, Method: Compositional matrix adjust.
Identities = 227/227 (100%), Positives = 227/227 (100%)
Query: 1 MPKEVKTRANRVQRRGMQMQHLHKLCWRWLKQDGVSDMDIIVRQSIYWPDGSIKKRTKSY 60
MPKEVKTRANRVQRRGMQMQHLHKLCWRWLKQDGVSDMDIIVRQSIYWPDGSIKKRTKSY
Sbjct: 1 MPKEVKTRANRVQRRGMQMQHLHKLCWRWLKQDGVSDMDIIVRQSIYWPDGSIKKRTKSY 60
Query: 61 ATEKTHKRMCQLVQALVDKYNEDHNLFGDLAHMLQDVLHYQSVRDKFMGYYHLNFTTKTK 120
ATEKTHKRMCQLVQALVDKYNEDHNLFGDLAHMLQDVLHYQSVRDKFMGYYHLNFTTKTK
Sbjct: 61 ATEKTHKRMCQLVQALVDKYNEDHNLFGDLAHMLQDVLHYQSVRDKFMGYYHLNFTTKTK 120
Query: 121 EADDLDAGIDNLFFVEIRRSGRGKHEEMLVNCFCMVNPTDNDEDKICYGCANQGSVDMKH 180
EADDLDAGIDNLFFVEIRRSGRGKHEEMLVNCFCMVNPTDNDEDKICYGCANQGSVDMKH
Sbjct: 121 EADDLDAGIDNLFFVEIRRSGRGKHEEMLVNCFCMVNPTDNDEDKICYGCANQGSVDMKH 180
Query: 181 PDPCKYDGGHLDMGRPFECVEEWSDSEDDAEYVKTKEAKIRHMYEGL 227
PDPCKYDGGHLDMGRPFECVEEWSDSEDDAEYVKTKEAKIRHMYEGL
Sbjct: 181 PDPCKYDGGHLDMGRPFECVEEWSDSEDDAEYVKTKEAKIRHMYEGL 227
>Os08g0495300 Conserved hypothetical protein
Length = 243
Score = 176 bits (447), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 86/137 (62%), Positives = 101/137 (73%), Gaps = 3/137 (2%)
Query: 89 DLAHMLQDVLHYQSVRDKFMGYYHLNFTTKTKEADDLDAGIDNLFFVEIRRSGRGKHEEM 148
DLA L+DVLHYQ + + + YYHLNFT KTKEAD LD+ DNLFFVE++R G G +EEM
Sbjct: 80 DLALKLKDVLHYQPICENHIWYYHLNFTAKTKEADGLDSTSDNLFFVEVKRMGIGNYEEM 139
Query: 149 LVNCFCMVNPTDNDEDKICYGCANQGSVDMKHPDPCKYDGGHLDMGRPFECVEEWSDSED 208
LV+CFCMVNP D K C GC N G+VDMKHPD +Y GHLD PF C +WSDS D
Sbjct: 140 LVSCFCMVNP---DNGKPCKGCTNNGTVDMKHPDTDEYFAGHLDAYLPFGCFGKWSDSND 196
Query: 209 DAEYVKTKEAKIRHMYE 225
D +YVK +EAK+RHMYE
Sbjct: 197 DDKYVKAREAKLRHMYE 213
>Os06g0134300 Conserved hypothetical protein
Length = 416
Score = 161 bits (407), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 96/213 (45%), Positives = 136/213 (63%), Gaps = 16/213 (7%)
Query: 20 QHLHKL-CWRWLKQDGVSDMDIIVRQSIYWPDGSIKKRTKSYATEKTHKRMCQLVQALVD 78
+HL L C + +QDGVS ++ ++++S+YWPDG+ KK ++S A++ KR Q+VQ L+D
Sbjct: 199 RHLESLKCPMFKEQDGVSPVERMIQKSLYWPDGTRKKYSRSQASQNVDKRRRQMVQVLLD 258
Query: 79 KYNEDHNLFGDLAHMLQDVLHYQSVRDKFMGYYHLNFTTKTKEADDLDAGIDNLFFVEIR 138
KYN+DH+L DLA+ LQDV+HYQ + + + H NFT KT AD IDNLFF E+
Sbjct: 259 KYNDDHDLVEDLAYELQDVVHYQLIVEGIKWFNHFNFTAKTSGAD-----IDNLFFAEV- 312
Query: 139 RSGRGKHEEMLVNCFCMVNPTDNDEDKICYGCANQGSVDMKHP-DPCKYDGGHLDMGRPF 197
S +G+ E+ +V C C++ DN ICYGC N ++DMKHP D Y GGH D+ PF
Sbjct: 313 MSSQGE-EDWVVTCCCLIKSADN---GICYGCKNDRNLDMKHPNDSDTYVGGHKDIVMPF 368
Query: 198 ECVEEWS---DSEDDAEYVKTKEAKIRHMYEGL 227
E E W+ +D+ E + K ++IR M EGL
Sbjct: 369 E-TENWTESESDDDEDEEEEVKASRIRRMIEGL 400
>Os06g0136100 Conserved hypothetical protein
Length = 408
Score = 152 bits (385), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 92/210 (43%), Positives = 128/210 (60%), Gaps = 13/210 (6%)
Query: 20 QHLHKLCWRWLKQ--DGVSDMDIIVRQSIYWPDGSIKKRTKSYATEKTHKRMCQLVQALV 77
QHLH L + + D + M+ ++RQ++YWPDG +KR KS + K C L+QALV
Sbjct: 180 QHLHDLRIPEMGEELDRLPLMEKMIRQAMYWPDGK-RKRCKSAGYFEKDK--CHLIQALV 236
Query: 78 DKYNEDHNLFGDLAHMLQDVLHYQSVRDKFMGYYHLNFTTKTKEADDLDAGIDNLFFVEI 137
+KYNEDHNL GD A+ L+D L + + + Y+HLNFT K K AD G++NLFF EI
Sbjct: 237 EKYNEDHNLLGDFAYELKDFLQHGVIYEDQRQYHHLNFTAKVKRAD--GCGVENLFFAEI 294
Query: 138 RRSGRGKHEEMLVNCFCMVNPTDNDEDKICYGCANQGSVDMKHPDPCKYDGGHLDMGRPF 197
+G++ E +V+C C++ P+ N CYGC N G V MKHP+ Y GGHLD PF
Sbjct: 295 SHM-QGEY-EWVVSCCCIIKPSANGH---CYGCRNNGYVGMKHPNNDAYSGGHLDGYLPF 349
Query: 198 ECVEEWSDSEDDAEYVKTKEAKIRHMYEGL 227
V ++ + D+ VK +E +R MY+GL
Sbjct: 350 G-VNSYARNNDEELSVKDEEDMLRRMYKGL 378
>Os06g0133700
Length = 315
Score = 114 bits (284), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 67/157 (42%), Positives = 94/157 (59%), Gaps = 8/157 (5%)
Query: 72 LVQALVDKYNEDHNLFGDLAHMLQDVLHYQSVRDKFMGYYHLNFTTKTKEADDLDAGIDN 131
LVQALV+KYN+DHNL GD A+ L++ L + + YYH+NFTTKTK A +DN
Sbjct: 155 LVQALVEKYNDDHNLLGDFAYELKEFLQIGVMYEDQRYYYHINFTTKTKGAHKSGCAMDN 214
Query: 132 LFFVEIRRSGRGKHEEMLVNCFCMVNPTDNDEDKICYGCANQGSVDMKHPDPC-KYDGGH 190
LFF E+ +GK +E +++C C++ P N CYGC N G +KHP+ Y GGH
Sbjct: 215 LFFAELSHM-QGK-DEWVISCCCVIKPAANGH---CYGCRNDGKSGLKHPNNSDAYSGGH 269
Query: 191 LDMGRPFECVEEWSDSEDDAEYVKTKEAKIRHMYEGL 227
LD PF + S S+ D + +EA +R +Y+G+
Sbjct: 270 LDGCLPFGLND--SRSKYDGLNPEDEEAMLRSLYKGM 304
>Os06g0134400 Conserved hypothetical protein
Length = 407
Score = 110 bits (275), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 63/164 (38%), Positives = 102/164 (62%), Gaps = 8/164 (4%)
Query: 28 RWLKQDGVSDMDIIVRQSIYWPDGSIKKRTKSYATEKTHKRMCQLVQALVDKYNEDHNLF 87
++ ++DG S +D++VR+ +Y+PDG+ ++ +KS T+ H M QL + ++D YN+DH+L
Sbjct: 195 KFEERDGESIVDMMVRKILYFPDGTRRRYSKSQVTQDVHNDMRQLARVILDMYNDDHSLL 254
Query: 88 GDLAHMLQDVLHYQSVRDKFMGYYHLNFTTKTKEADDLDAGIDNLFFVEIRRSGRGKHEE 147
G LA+ L+DV+H+Q + + + HLNFT TK ++LD I +LFF E+ ++
Sbjct: 255 GGLAYELKDVIHFQPIMESCTWFDHLNFTALTKGDNELDYQI-HLFFAELM--CLVGQKD 311
Query: 148 MLVNCFCMVNPTDNDEDKICYGCANQGSVDMKHP-DPCKYDGGH 190
+V C C + DN CY C Q +V++KHP D +Y GGH
Sbjct: 312 YIVTCCCALKSDDNGN---CYNCKLQ-NVNLKHPNDTNQYAGGH 351
>Os06g0134500 Conserved hypothetical protein
Length = 364
Score = 105 bits (261), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 72/211 (34%), Positives = 122/211 (57%), Gaps = 15/211 (7%)
Query: 20 QHLHKL--CWRWLKQDGVSDMDIIVRQSIYWPDGSIKKRTKSYATEKTHKRMCQLVQALV 77
H++KL ++ ++ G S +D+I+R+++YWPDG+ KK +K+ A + + M QL + ++
Sbjct: 155 SHINKLYPPVKFEERAGESYVDMIIRKALYWPDGTRKKCSKAEAFQNVNNNMNQLAKVIL 214
Query: 78 DKYNEDHNLFGDLAHMLQDVLHYQSVRDKFMGYYHLNFTTKTKEADDLDAGIDNLFFVEI 137
D YN+DHNL DLA L+ V++Y+ + + + H+NFT TK + LD+ D+LFF E
Sbjct: 215 DMYNDDHNLLEDLAFELKGVINYEPIIESRRWFDHINFTATTKGLNGLDS--DHLFFAEA 272
Query: 138 RRSGRGKHEEMLVNCFCMVNPTDNDEDKICYGCANQGSVDMKHP-DPCKYDGGHLDMGRP 196
S +G+ ++ +V C +++ DN CY C G+ MKHP D Y GGH +
Sbjct: 273 -MSLKGE-KDYVVTCCSLISSDDNGN---CYTC-KIGNKSMKHPSDVNSYVGGHCYIKGI 326
Query: 197 FECVEEWSDSEDDAEYVKTKEAKIRHMYEGL 227
++ + ED+ + ++R MY+GL
Sbjct: 327 YDTIVSSDSEEDEDAEEQ----RLRKMYQGL 353
>Os08g0494400 Conserved hypothetical protein
Length = 238
Score = 80.9 bits (198), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 34/58 (58%), Positives = 47/58 (81%)
Query: 31 KQDGVSDMDIIVRQSIYWPDGSIKKRTKSYATEKTHKRMCQLVQALVDKYNEDHNLFG 88
+ D +S M+ ++R+ +YWPDG+IK+RTKS+AT + KRM Q +QALVDKYN+DHNL G
Sbjct: 151 QNDDISSMENVIRRCLYWPDGTIKRRTKSFATWEAKKRMHQFIQALVDKYNDDHNLLG 208
>Os10g0494950 Conserved hypothetical protein
Length = 406
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 76/146 (52%), Gaps = 18/146 (12%)
Query: 51 GSIKKRTKSYATEKTHKRMCQLVQALVDKYNEDHNLFGDLAHMLQDVLHYQSVRDKFMGY 110
G K+ S +++ T+ LVQA++D+YN+D+ LFG+ A+ L+D++ Q +
Sbjct: 201 GPPKRDPSSPSSKTTYDEKQYLVQAILDQYNDDNKLFGNHAYELEDLVSRQLFCEN---- 256
Query: 111 YHLNFTTKTKEADDLDAGIDNLFFVEIRRSGRGKHEEMLVNCFCMVNPTDNDEDKICYGC 170
+K K ADD LFF E+ R V+CFC ++ N CYGC
Sbjct: 257 ------SKQKGADDSSG---KLFFAEVTHVQR--RMAWKVSCFCKIDTEVNGGH--CYGC 303
Query: 171 ANQGSVDMKHP-DPCKYDGGHLDMGR 195
N+G+ MKHP + Y GGHLD+ R
Sbjct: 304 RNKGTPPMKHPQNTNAYAGGHLDVER 329
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.321 0.136 0.433
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 8,597,242
Number of extensions: 382074
Number of successful extensions: 704
Number of sequences better than 1.0e-10: 9
Number of HSP's gapped: 689
Number of HSP's successfully gapped: 9
Length of query: 227
Length of database: 17,035,801
Length adjustment: 97
Effective length of query: 130
Effective length of database: 11,971,043
Effective search space: 1556235590
Effective search space used: 1556235590
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 154 (63.9 bits)