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Os06g0136100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.3 (0.012) R2 : 0.0395
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.109 (0.0252) R2dN8 : 0.051 R2N8 : 0.0395
σ : 0.225
deviance : 23.32
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
16.66 0.192 11.2 0.252 0.299 -0.0881 0.0507 2.23 -0.0881 9.2 30.32 1267 -- --
16.87 0.191 11.3 -0.103 0.326 0.199 0.101 -- -0.113 9.08 26.38 1148 -- --
16.66 0.19 11.2 0.257 0.298 -0.0939 -- 2.27 -0.0888 9.16 30.81 1288 -- --
16.77 0.191 11.3 -0.14 0.316 0.192 -- -- -0.118 9.3 27.49 1148 -- --
21.68 0.217 11.2 0.446 -- -0.231 -- 3.25 -0.0917 -- 30.8 1407 -- --
18.2 0.2 11.3 -0.084 0.294 -- 0.0386 -- -0.12 8.88 -- -- -- --
18.2 0.2 11.3 -0.0827 0.294 -- -- -- -0.12 8.89 -- -- -- --
22.03 0.219 11.3 -0.131 -- 0.149 -- -- -0.122 -- 26.7 1444 -- --
17.22 0.193 11.3 -- 0.313 0.161 -- -- -0.1 9.16 27.92 1162 -- --
23.14 0.225 11.3 -0.0827 -- -- -- -- -0.118 -- -- -- -- --
18.38 0.201 11.3 -- 0.294 -- -- -- -0.111 8.91 -- -- -- --
22.48 0.221 11.3 -- -- 0.128 -- -- -0.104 -- 27.1 1442 -- --
23.32 0.225 11.3 -- -- -- -- -- -0.109 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 16.02 radiation 1.0 1440 < th dose dependent rect. 8 9
8 16.28 radiation 1.0 1440 < th dose independent rect. 13 2
9 16.28 wind 1.0 1440 < th dose independent rect. 3 4
10 16.28 radiation 1.0 1440 < th dose dependent rect. 13 2
11 16.30 wind 5.0 14400 < th dose independent rect. 7 3
12 16.30 radiation 1.0 1440 < th dose independent rect. 8 7
15 16.31 radiation 1.0 1440 > th dose independent rect. 13 2
16 16.31 wind 5.0 14400 > th dose independent rect. 7 3
17 16.31 wind 5.0 14400 < th dose independent rect. 6 5
25 16.33 wind 5.0 14400 > th dose independent rect. 6 5
26 16.33 radiation 1.0 1440 < th dose independent rect. 8 5
31 16.33 radiation 1.0 1440 < th dose dependent rect. 8 5
35 16.35 precipitation 0.1 270 > th dose independent rect. 2 2
45 16.36 precipitation 0.1 270 > th dose dependent rect. 2 2
47 16.37 wind 1.0 4320 > th dose independent rect. 4 2
50 16.37 wind 5.0 14400 < th dose independent rect. 19 18
55 16.38 wind 5.0 14400 > th dose independent rect. 19 18
56 16.39 wind 3.0 14400 < th dose dependent rect. 2 3
57 16.40 wind 1.0 1440 > th dose independent rect. 3 4
59 16.40 radiation 1.0 1440 > th dose independent rect. 8 7
61 16.40 wind 5.0 14400 > th dose dependent rect. 8 1
68 16.41 wind 5.0 14400 > th dose independent rect. 17 20
69 16.41 wind 5.0 14400 < th dose independent rect. 17 20
72 16.42 wind 1.0 4320 < th dose independent rect. 4 2
103 16.45 radiation 1.0 1440 > th dose independent rect. 11 1
123 16.46 wind 3.0 14400 > th dose dependent rect. 19 18
170 16.51 humidity 70.0 10 > th dose independent rect. 17 11
174 16.52 atmosphere 995.0 43200 > th dose independent rect. 12 2
179 16.52 humidity 80.0 43200 > th dose dependent rect. 20 5
180 16.52 humidity 50.0 10 > th dose dependent rect. 17 11
185 16.53 temperature 20.0 270 > th dose independent rect. 20 15
186 16.53 humidity 70.0 30 > th dose independent rect. 13 15
190 16.53 wind 1.0 14400 > th dose dependent rect. 20 9
204 16.54 humidity 80.0 43200 > th dose dependent rect. 21 3
215 16.55 wind 7.0 43200 > th dose dependent rect. 19 1
218 16.55 humidity 80.0 43200 > th dose dependent rect. 22 1
236 16.56 wind 9.0 14400 < th dose dependent rect. 20 9
242 16.57 temperature 30.0 720 < th dose independent rect. 16 3
251 16.57 wind 1.0 14400 > th dose dependent rect. 24 1
252 16.57 wind 7.0 14400 < th dose dependent rect. 24 1
255 16.57 wind 9.0 14400 > th dose dependent rect. 18 17
257 16.58 wind 5.0 14400 < th dose independent sin 6 NA
259 16.58 humidity 80.0 1440 > th dose independent rect. 11 3
264 16.58 atmosphere 995.0 43200 < th dose dependent rect. 14 1
265 16.58 wind 1.0 14400 > th dose dependent rect. 2 2
311 16.61 wind 5.0 14400 > th dose independent sin 6 NA
314 16.61 humidity 80.0 1440 < th dose independent rect. 11 2
320 16.61 temperature 30.0 720 < th dose independent rect. 16 11
323 16.61 temperature 20.0 30 > th dose independent rect. 22 14
326 16.61 precipitation 0.1 30 > th dose independent rect. 3 17
335 16.61 wind 1.0 14400 > th dose dependent rect. 24 4
360 16.62 atmosphere 995.0 43200 < th dose dependent rect. 12 4
363 16.62 wind 9.0 43200 > th dose dependent rect. 18 13
372 16.63 humidity 90.0 4320 < th dose independent rect. 17 2
376 16.63 atmosphere 995.0 43200 < th dose independent rect. 7 8
392 16.63 humidity 70.0 43200 > th dose dependent rect. 12 15
394 16.63 precipitation 0.1 30 > th dose dependent rect. 3 17
407 16.64 wind 5.0 43200 < th dose independent rect. 24 19
417 16.64 humidity 70.0 43200 > th dose dependent rect. 13 13
423 16.65 wind 7.0 43200 < th dose independent rect. 17 1
425 16.65 radiation 10.0 1440 < th dose independent rect. 5 1
426 16.65 humidity 60.0 720 > th dose independent rect. 16 2
429 16.65 temperature 20.0 14400 > th dose independent rect. 19 5
430 16.65 precipitation 0.1 30 > th dose independent rect. 3 5
450 16.65 wind 9.0 43200 > th dose independent rect. 18 14
463 16.65 wind 5.0 43200 < th dose dependent rect. 9 1
466 16.65 precipitation 0.1 30 > th dose dependent rect. 3 5
498 16.66 wind 3.0 14400 > th dose independent rect. 24 1
501 16.66 precipitation 0.1 30 > th dose independent rect. 3 3
509 16.66 wind 5.0 43200 < th dose independent rect. 2 16
515 16.66 wind 5.0 43200 > th dose independent rect. 24 19
523 16.66 wind 9.0 43200 > th dose dependent sin 12 NA
524 16.66 humidity 70.0 43200 > th dose dependent sin 16 NA
529 16.66 precipitation 0.1 30 > th dose dependent rect. 3 3
548 16.67 temperature 20.0 14400 > th dose independent rect. 20 3
554 16.67 radiation 10.0 1440 < th dose independent rect. 24 6
576 16.67 wind 9.0 14400 > th dose dependent rect. 18 5
593 16.68 wind 5.0 43200 < th dose independent sin 1 NA
594 16.68 humidity 70.0 30 < th dose independent sin 13 NA
595 16.68 temperature 20.0 14400 < th dose independent rect. 21 2
608 16.68 wind 5.0 43200 > th dose independent rect. 2 17
610 16.68 wind 9.0 14400 > th dose independent rect. 18 17
624 16.68 radiation 1.0 30 < th dose independent rect. 5 23
625 16.68 wind 3.0 14400 > th dose dependent sin 8 NA
645 16.68 wind 3.0 14400 > th dose dependent rect. 24 13
647 16.68 temperature 25.0 720 > th dose dependent rect. 18 14
652 16.68 wind 5.0 43200 > th dose dependent rect. 24 20
666 16.69 humidity 80.0 1440 < th dose independent rect. 7 11
671 16.69 wind 5.0 43200 > th dose independent rect. 3 15
676 16.69 wind 9.0 14400 < th dose independent rect. 18 17
690 16.69 wind 7.0 43200 < th dose independent rect. 14 22
696 16.69 precipitation 0.1 30 > th dose dependent sin 2 NA
698 16.69 humidity 70.0 1440 > th dose dependent rect. 11 2
718 16.69 wind 5.0 43200 > th dose dependent rect. 2 18
728 16.70 wind 5.0 43200 > th dose independent sin 1 NA
742 16.70 humidity 80.0 1440 < th dose independent rect. 7 8
750 16.70 wind 9.0 43200 < th dose independent rect. 18 14
799 16.70 wind 5.0 43200 > th dose dependent rect. 4 16
811 16.70 temperature 30.0 1440 > th dose dependent rect. 16 20
817 16.71 wind 5.0 43200 < th dose independent no NA NA
819 16.71 wind 9.0 14400 > th dose independent rect. 20 1
820 16.71 wind 3.0 14400 < th dose independent rect. 24 1
827 16.71 temperature 20.0 10 > th dose independent rect. 22 6
850 16.71 humidity 80.0 43200 > th dose independent rect. 24 18
861 16.71 wind 9.0 43200 < th dose independent rect. 18 21
870 16.71 wind 5.0 43200 < th dose independent rect. 2 23
872 16.71 wind 5.0 43200 < th dose independent rect. 9 23
878 16.71 temperature 25.0 720 > th dose dependent sin 12 NA
881 16.71 temperature 30.0 1440 > th dose dependent rect. 16 1
889 16.71 temperature 25.0 720 > th dose dependent rect. 17 10
904 16.71 wind 9.0 14400 > th dose dependent rect. 20 15
915 16.72 precipitation 0.1 90 > th dose independent sin 10 NA
916 16.72 precipitation 0.1 30 > th dose independent sin 2 NA
967 16.72 humidity 70.0 30 < th dose independent rect. 12 20
971 16.72 wind 7.0 43200 < th dose independent rect. 11 21