Os06g0134500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os06g0134500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 132.31 | 0.54 | 6.38 | 0.436 | 0.47 | -1.51 | -1.07 | 2.75 | -0.293 | 2.58 | 29.17 | 83 | -- | -- |
| 139.12 | 0.549 | 6.32 | 0.914 | 0.404 | -1.51 | -0.382 | -- | -0.202 | 2.74 | 27.04 | 92 | -- | -- |
| 135.6 | 0.542 | 6.35 | 0.479 | 0.465 | -1.57 | -- | 2.23 | -0.248 | 2.25 | 29.12 | 79 | -- | -- |
| 138.97 | 0.549 | 6.32 | 0.918 | 0.43 | -1.57 | -- | -- | -0.19 | 2.15 | 27.12 | 89 | -- | -- |
| 137.01 | 0.545 | 6.31 | 0.826 | -- | -1.67 | -- | 1.57 | -0.0293 | -- | 21.51 | 396 | -- | -- |
| 173.02 | 0.617 | 6.25 | 1.32 | 0.0403 | -- | 0.582 | -- | 0.15 | 17.6 | -- | -- | -- | -- |
| 173.74 | 0.617 | 6.25 | 1.31 | 0.0618 | -- | -- | -- | 0.152 | 20.5 | -- | -- | -- | -- |
| 136.69 | 0.545 | 6.29 | 0.869 | -- | -2.26 | -- | -- | -0.044 | -- | 21.02 | 361 | -- | -- |
| 159.23 | 0.588 | 6.35 | -- | 0.577 | -1.94 | -- | -- | -0.286 | 2.28 | 27.61 | 81 | -- | -- |
| 173.95 | 0.616 | 6.25 | 1.31 | -- | -- | -- | -- | 0.152 | -- | -- | -- | -- | -- |
| 219.09 | 0.692 | 6.28 | -- | 0.0619 | -- | -- | -- | 0.00602 | 22.1 | -- | -- | -- | -- |
| 139.65 | 0.55 | 6.32 | -- | -- | -2.43 | -- | -- | -0.268 | -- | 20.1 | 6156 | -- | -- |
| 219.32 | 0.691 | 6.28 | -- | -- | -- | -- | -- | 0.006 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 130.69 | temperature | 30 | 90 | < th | dose dependent | rect. | 9 | 23 |
| 3 | 131.51 | temperature | 30 | 90 | < th | dose dependent | rect. | 13 | 23 |
| 6 | 132.38 | temperature | 25 | 270 | < th | dose dependent | rect. | 1 | 22 |
| 7 | 132.69 | temperature | 30 | 90 | < th | dose dependent | no | NA | NA |
| 9 | 132.82 | temperature | 10 | 270 | > th | dose dependent | rect. | 17 | 23 |
| 18 | 133.08 | temperature | 30 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 22 | 133.26 | temperature | 30 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 31 | 133.42 | temperature | 30 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 35 | 133.50 | temperature | 30 | 30 | < th | dose dependent | rect. | 23 | 23 |
| 64 | 134.37 | temperature | 15 | 90 | > th | dose dependent | rect. | 8 | 23 |
| 66 | 134.42 | temperature | 10 | 90 | > th | dose dependent | no | NA | NA |
| 71 | 134.51 | temperature | 30 | 30 | < th | dose dependent | rect. | 17 | 23 |
| 74 | 134.59 | temperature | 25 | 90 | < th | dose dependent | rect. | 3 | 23 |
| 87 | 134.81 | temperature | 15 | 10 | > th | dose dependent | rect. | 8 | 23 |
| 95 | 134.91 | temperature | 25 | 270 | < th | dose dependent | rect. | 7 | 23 |
| 98 | 134.92 | temperature | 15 | 90 | > th | dose dependent | rect. | 6 | 23 |
| 100 | 134.93 | temperature | 25 | 1440 | < th | dose dependent | rect. | 3 | 13 |
| 130 | 135.23 | temperature | 25 | 1440 | < th | dose dependent | sin | 2 | NA |
| 138 | 135.30 | temperature | 30 | 30 | < th | dose dependent | rect. | 7 | 23 |
| 217 | 135.83 | temperature | 25 | 720 | < th | dose dependent | rect. | 5 | 21 |
| 219 | 135.85 | temperature | 25 | 1440 | < th | dose dependent | rect. | 8 | 2 |
| 239 | 135.94 | temperature | 25 | 1440 | < th | dose dependent | rect. | 3 | 20 |
| 253 | 136.00 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 22 |
| 254 | 136.01 | wind | 5 | 43200 | > th | dose independent | rect. | 18 | 3 |
| 288 | 136.09 | radiation | 30 | 4320 | < th | dose independent | rect. | 5 | 2 |
| 305 | 136.12 | temperature | 25 | 1440 | < th | dose dependent | rect. | 8 | 21 |
| 307 | 136.13 | wind | 5 | 43200 | < th | dose independent | rect. | 18 | 3 |
| 351 | 136.21 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |
| 383 | 136.33 | temperature | 25 | 1440 | < th | dose dependent | rect. | 13 | 23 |
| 388 | 136.36 | wind | 5 | 43200 | > th | dose independent | rect. | 17 | 8 |
| 395 | 136.38 | temperature | 25 | 1440 | < th | dose dependent | rect. | 15 | 23 |
| 426 | 136.48 | temperature | 10 | 1440 | > th | dose dependent | rect. | 8 | 3 |
| 429 | 136.48 | temperature | 15 | 90 | > th | dose dependent | rect. | 1 | 23 |
| 452 | 136.54 | wind | 5 | 43200 | < th | dose independent | rect. | 17 | 8 |
| 474 | 136.60 | temperature | 10 | 1440 | > th | dose dependent | rect. | 9 | 1 |
| 530 | 136.71 | wind | 5 | 43200 | > th | dose independent | rect. | 19 | 1 |
| 553 | 136.77 | radiation | 30 | 4320 | < th | dose independent | rect. | 17 | 14 |
| 557 | 136.77 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 23 |
| 572 | 136.81 | humidity | 80 | 43200 | < th | dose dependent | rect. | 6 | 1 |
| 578 | 136.82 | wind | 5 | 43200 | > th | dose dependent | rect. | 18 | 3 |
| 632 | 136.96 | temperature | 10 | 720 | > th | dose dependent | rect. | 1 | 23 |
| 645 | 137.00 | wind | 5 | 43200 | > th | dose dependent | rect. | 17 | 8 |
| 661 | 137.05 | humidity | 70 | 43200 | < th | dose dependent | rect. | 5 | 4 |
| 689 | 137.10 | temperature | 15 | 270 | > th | dose dependent | rect. | 3 | 23 |
| 874 | 137.53 | wind | 5 | 43200 | < th | dose independent | rect. | 19 | 1 |
| 980 | 137.72 | temperature | 10 | 720 | > th | dose dependent | rect. | 11 | 23 |
| 981 | 137.73 | radiation | 30 | 4320 | < th | dose independent | rect. | 1 | 6 |