BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os06g0134500 Os06g0134500|AK063440
(364 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os06g0134500 Conserved hypothetical protein 731 0.0
Os06g0134400 Conserved hypothetical protein 394 e-110
Os06g0134300 Conserved hypothetical protein 286 1e-77
Os06g0136100 Conserved hypothetical protein 197 1e-50
Os06g0134466 Hypothetical protein 168 5e-42
Os06g0133700 155 4e-38
Os08g0494400 Conserved hypothetical protein 112 4e-25
Os08g0495200 Conserved hypothetical protein 105 8e-23
Os10g0494950 Conserved hypothetical protein 103 1e-22
Os08g0495300 Conserved hypothetical protein 79 5e-15
>Os06g0134500 Conserved hypothetical protein
Length = 364
Score = 731 bits (1886), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/364 (96%), Positives = 352/364 (96%)
Query: 1 MRSRRLPCADAVFRPRFTDEDARACSDSRGHFASGRDPSPPPLLPAQCEDHVGGTSGLAD 60
MRSRRLPCADAVFRPRFTDEDARACSDSRGHFASGRDPSPPPLLPAQCEDHVGGTSGLAD
Sbjct: 1 MRSRRLPCADAVFRPRFTDEDARACSDSRGHFASGRDPSPPPLLPAQCEDHVGGTSGLAD 60
Query: 61 VSSLGDFPGATTLKESTASSPTSSLQAVPDDTIDAPQSGHCLSSSLGSIIWVQKPPHGRP 120
VSSLGDFPGATTLKESTASSPTSSLQAVPDDTIDAPQSGHCLSSSLGSIIWVQKPPHGRP
Sbjct: 61 VSSLGDFPGATTLKESTASSPTSSLQAVPDDTIDAPQSGHCLSSSLGSIIWVQKPPHGRP 120
Query: 121 GVYHIRKDRLGSFHTYPDLGGPFQSLNEAEDVISSHINKLYPPVKFEERAGESYVDMIIR 180
GVYHIRKDRLGSFHTYPDLGGPFQSLNEAEDVISSHINKLYPPVKFEERAGESYVDMIIR
Sbjct: 121 GVYHIRKDRLGSFHTYPDLGGPFQSLNEAEDVISSHINKLYPPVKFEERAGESYVDMIIR 180
Query: 181 KALYWPDGTRKKCSKAEAFQNVNNNMNQLAKVILDMYNDDHNLLEDLAFELKGVINYEPI 240
KALYWPDGTRKKCSKAEAFQNVNNNMNQLAKVILDMYNDDHNLLEDLAFELKGVINYEPI
Sbjct: 181 KALYWPDGTRKKCSKAEAFQNVNNNMNQLAKVILDMYNDDHNLLEDLAFELKGVINYEPI 240
Query: 241 IESRRWFDHINFTATTKGLNGLDSDHLFFAEAMSLKGEKDYVVTCCSLISSDDNGNCYTC 300
IESRRWFDHINFTATTKGLNGLDSDHLFFAEAMSLKGEKDYVVTCCSLISSDDNGNCYTC
Sbjct: 241 IESRRWFDHINFTATTKGLNGLDSDHLFFAEAMSLKGEKDYVVTCCSLISSDDNGNCYTC 300
Query: 301 KIGNKSMKHPSDVNSYVGGHCYIKGIYDTIVXXXXXXXXXXXXQRLRKMYQGLDDPGVCE 360
KIGNKSMKHPSDVNSYVGGHCYIKGIYDTIV QRLRKMYQGLDDPGVCE
Sbjct: 301 KIGNKSMKHPSDVNSYVGGHCYIKGIYDTIVSSDSEEDEDAEEQRLRKMYQGLDDPGVCE 360
Query: 361 ELFD 364
ELFD
Sbjct: 361 ELFD 364
>Os06g0134400 Conserved hypothetical protein
Length = 407
Score = 394 bits (1013), Expect = e-110, Method: Compositional matrix adjust.
Identities = 212/380 (55%), Positives = 258/380 (67%), Gaps = 36/380 (9%)
Query: 19 DEDARACSDSRGHFASG-RD-------------------------PSPPPLLPAQCEDHV 52
DE+ R SDSRG+FASG RD P P LP QCE +
Sbjct: 15 DEEVRVYSDSRGYFASGGRDVDVGPFPTSDELYAALDHHYHLRSKPCDPAPLPTQCEGLL 74
Query: 53 GGTS--------GLADVSSLGDFPGATTLKESTASSPTSSLQAVPDDTIDAPQSGHCLSS 104
G S DV S+G+ GA LKE SSP+SS QAVP+D IDA SG CLSS
Sbjct: 75 RGASEPESAQALQEPDVLSVGELLGAIALKEPIISSPSSSPQAVPEDNIDAVPSGCCLSS 134
Query: 105 SLGSIIWVQKPPHGRPGVYHIRKDRLGSFHTYPDLGGPFQSLNEAEDVISSHINKLYPPV 164
S GS+IWV KPP GR G YHIR DR G FHTYPD+GGPF SLNEA+D +SH+N LYPP+
Sbjct: 135 SPGSVIWVHKPPEGRRGSYHIRMDRSGLFHTYPDMGGPFLSLNEAQDAFTSHLNILYPPL 194
Query: 165 KFEERAGESYVDMIIRKALYWPDGTRKKCSKAEAFQNVNNNMNQLAKVILDMYNDDHNLL 224
KFEER GES VDM++RK LY+PDGTR++ SK++ Q+V+N+M QLA+VILDMYNDDH+LL
Sbjct: 195 KFEERDGESIVDMMVRKILYFPDGTRRRYSKSQVTQDVHNDMRQLARVILDMYNDDHSLL 254
Query: 225 EDLAFELKGVINYEPIIESRRWFDHINFTATTKGLNGLDSD-HLFFAEAMSLKGEKDYVV 283
LA+ELK VI+++PI+ES WFDH+NFTA TKG N LD HLFFAE M L G+KDY+V
Sbjct: 255 GGLAYELKDVIHFQPIMESCTWFDHLNFTALTKGDNELDYQIHLFFAELMCLVGQKDYIV 314
Query: 284 TCCSLISSDDNGNCYTCKIGNKSMKHPSDVNSYVGGHCYIKGIYDTIVXXXXXXXXXXXX 343
TCC + SDDNGNCY CK+ N ++KHP+D N Y GGH Y+ GIYDT
Sbjct: 315 TCCCALKSDDNGNCYNCKLQNVNLKHPNDTNQYAGGHEYLCGIYDT-EEMSESEDEEKEE 373
Query: 344 QRLRKMYQGLDDPGVCEELF 363
QR+RK+Y+ L++PG+ E+LF
Sbjct: 374 QRIRKLYEDLEEPGLHEKLF 393
>Os06g0134300 Conserved hypothetical protein
Length = 416
Score = 286 bits (732), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 170/392 (43%), Positives = 232/392 (59%), Gaps = 51/392 (13%)
Query: 17 FTDEDARACSDSRGHFASG----------------------------RDPSPPPLLPAQC 48
F D +SRG+FA G RDP+PPPLLP QC
Sbjct: 27 FMDRQILVSRNSRGYFALGYSLPGEPFPSLHELLGAIYDHYHPQRESRDPAPPPLLP-QC 85
Query: 49 EDHVGGTSGLA--------DVSSLGDFPGATTLKESTASSPTSSLQAVPDDTID-APQSG 99
E+HV G + L+ +V+++ + P TTL + ++ TSSL + P T + +P S
Sbjct: 86 EEHVEGNTQLSLEQTLEEPEVATMEESPEPTTLGDPFTAT-TSSLPSAPHGTSEVSPSSR 144
Query: 100 HCLSSSLGSIIWVQKPPHGRPGVYHIRKDRLGSFHTYPDLGGPFQSLNEAEDVISSHINK 159
+S S IW + P P +YHIR DR GSFHTYP L GPF +L EAED I+ H+
Sbjct: 145 LRHHTSPESTIWTRDPADW-PWIYHIRMDRGGSFHTYPALDGPFLNLYEAEDAINRHLES 203
Query: 160 LYPPVKFEERAGESYVDMIIRKALYWPDGTRKKCSKAEAFQNVNNNMNQLAKVILDMYND 219
L P+ F+E+ G S V+ +I+K+LYWPDGTRKK S+++A QNV+ Q+ +V+LD YND
Sbjct: 204 LKCPM-FKEQDGVSPVERMIQKSLYWPDGTRKKYSRSQASQNVDKRRRQMVQVLLDKYND 262
Query: 220 DHNLLEDLAFELKGVINYEPIIESRRWFDHINFTATTKGLNGLDSDHLFFAEAMSLKGEK 279
DH+L+EDLA+EL+ V++Y+ I+E +WF+H NFTA T +G D D+LFFAE MS +GE+
Sbjct: 263 DHDLVEDLAYELQDVVHYQLIVEGIKWFNHFNFTAKT---SGADIDNLFFAEVMSSQGEE 319
Query: 280 DYVVTCCSLISSDDNGNCYTCKIG-NKSMKHPSDVNSYVGGHCYIKGIYDT------IVX 332
D+VVTCC LI S DNG CY CK N MKHP+D ++YVGGH I ++T
Sbjct: 320 DWVVTCCCLIKSADNGICYGCKNDRNLDMKHPNDSDTYVGGHKDIVMPFETENWTESESD 379
Query: 333 XXXXXXXXXXXQRLRKMYQGLDDPGVCEELFD 364
R+R+M +GLDD E++FD
Sbjct: 380 DDEDEEEEVKASRIRRMIEGLDDSDEPEDIFD 411
>Os06g0136100 Conserved hypothetical protein
Length = 408
Score = 197 bits (501), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 122/306 (39%), Positives = 176/306 (57%), Gaps = 13/306 (4%)
Query: 60 DVS-SLGDFPGATTLKESTA--SSPTSSLQAVPDDTIDAPQSGHCLSSSLGSIIWVQKPP 116
DVS S+G + + TA SS +S L DDT + S CL SS GS I V++P
Sbjct: 82 DVSFSVGLLSNTASKEPITAHTSSSSSPLTVQHDDTETSTPSQCCLWSSPGSSILVRRP- 140
Query: 117 HGRPGVYHIRKDRLGSFHTYPDLG-GPFQSLNEAEDVISSHINKLYPPVKFEERAGESYV 175
G V++IR D G FH YPD+G GP+QSL+E +D I+ H++ L P EE +
Sbjct: 141 RGWYFVFYIRMDPGGCFHMYPDVGCGPYQSLSEVDDAINQHLHDLRIPEMGEELDRLPLM 200
Query: 176 DMIIRKALYWPDGTRKKCSKAEAFQNVNNNMNQLAKVILDMYNDDHNLLEDLAFELKGVI 235
+ +IR+A+YWPDG RK+C A F+ + L + +++ YN+DHNLL D A+ELK +
Sbjct: 201 EKMIRQAMYWPDGKRKRCKSAGYFEK---DKCHLIQALVEKYNEDHNLLGDFAYELKDFL 257
Query: 236 NYEPIIESRRWFDHINFTATTKGLNGLDSDHLFFAEAMSLKGEKDYVVTCCSLISSDDNG 295
+ I E +R + H+NFTA K +G ++LFFAE ++GE ++VV+CC +I NG
Sbjct: 258 QHGVIYEDQRQYHHLNFTAKVKRADGCGVENLFFAEISHMQGEYEWVVSCCCIIKPSANG 317
Query: 296 NCYTCK-IGNKSMKHPSDVNSYVGGHC--YIK-GIYDTIVXXXXXXXXXXXXQRLRKMYQ 351
+CY C+ G MKHP++ ++Y GGH Y+ G+ LR+MY+
Sbjct: 318 HCYGCRNNGYVGMKHPNN-DAYSGGHLDGYLPFGVNSYARNNDEELSVKDEEDMLRRMYK 376
Query: 352 GLDDPG 357
GLD PG
Sbjct: 377 GLDKPG 382
>Os06g0134466 Hypothetical protein
Length = 194
Score = 168 bits (426), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 102/187 (54%), Positives = 114/187 (60%), Gaps = 28/187 (14%)
Query: 5 RLPCADAVFRPRFTDEDARACSDSRGHFASG-------------------------RDPS 39
R PCAD V R FTDED R SDSRG+F+SG DP
Sbjct: 10 RDPCADGVSRSPFTDEDVRVYSDSRGYFSSGGRDDDAGPFPTSDELYHHYRPRTTPSDPV 69
Query: 40 PPPLLPAQCE-DHVGGTSGLADVSSLGDFPGATTLKESTASSPTSSLQAVPDDTIDAPQS 98
PPPL +QC DV SLG ATTLKES SP+SS QAV DTI++ S
Sbjct: 70 PPPLS-SQCSYPESAHALQEPDVLSLGKLLDATTLKESITCSPSSSPQAVSKDTINSSPS 128
Query: 99 GHCLSSSLGSIIWVQKPPHGRPGVYHIRKDRLGSFHTYPDLGGPFQSLNEAEDVISSHIN 158
CLSS GSIIWV++PP R GVYHIR DR GSFH YPDLGGPFQSLNEA+D ISSH+N
Sbjct: 129 VRCLSSP-GSIIWVREPPEDRLGVYHIRMDRSGSFHMYPDLGGPFQSLNEAQDAISSHLN 187
Query: 159 KLYPPVK 165
++YPPVK
Sbjct: 188 RIYPPVK 194
>Os06g0133700
Length = 315
Score = 155 bits (393), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 110/307 (35%), Positives = 160/307 (52%), Gaps = 42/307 (13%)
Query: 65 GDFPGATTLKESTASSPTSSLQAVPDDTIDAPQSGHCLSSSLGSIIWVQKPPHGRPGVYH 124
G+ +T LKE +S +SS Q V D IDA SS GS I V++PP G V++
Sbjct: 42 GELLSSTALKEPITASTSSSPQTVRRDGIDASTP---SGSSPGSSILVRRPP-GWYFVFY 97
Query: 125 IRKDRLGSFHTYPDLG-GPFQSLNEAEDVISSHINKL-YPPVKFEERAGESYVDMIIRKA 182
IR D G H YPD+G GP++SL E +D I+ H++ L P +K G D
Sbjct: 98 IRMDPGGRLHMYPDVGNGPYRSLPEVDDAINQHLHNLRIPEMKHFNLVGGYEKD------ 151
Query: 183 LYWPDGTRKKCSKAEAFQNVNNNMNQLAKVILDMYNDDHNLLEDLAFELKGVINYEPIIE 242
+C L + +++ YNDDHNLL D A+ELK + + E
Sbjct: 152 --------NRC---------------LVQALVEKYNDDHNLLGDFAYELKEFLQIGVMYE 188
Query: 243 SRRWFDHINFTATTKGLN--GLDSDHLFFAEAMSLKGEKDYVVTCCSLISSDDNGNCYTC 300
+R++ HINFT TKG + G D+LFFAE ++G+ ++V++CC +I NG+CY C
Sbjct: 189 DQRYYYHINFTTKTKGAHKSGCAMDNLFFAELSHMQGKDEWVISCCCVIKPAANGHCYGC 248
Query: 301 KIGNKS-MKHPSDVNSYVGGH---CYIKGIYDTIVXXXXXXXXXXXXQRLRKMYQGLDDP 356
+ KS +KHP++ ++Y GGH C G+ D+ LR +Y+G+D+P
Sbjct: 249 RNDGKSGLKHPNNSDAYSGGHLDGCLPFGLNDS-RSKYDGLNPEDEEAMLRSLYKGMDEP 307
Query: 357 GVCEELF 363
G E LF
Sbjct: 308 GYLEGLF 314
>Os08g0494400 Conserved hypothetical protein
Length = 238
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 72/184 (39%), Positives = 98/184 (53%), Gaps = 7/184 (3%)
Query: 45 PAQCEDHVGGT-SGLADVSSLGDFPGATTLKESTASSPTSSLQAVPDDTIDAPQSGHCLS 103
P Q E+HV T S A L G + SS AV DT P SG CLS
Sbjct: 27 PYQEEEHVVETASAKARADPLYAKEGHVPSYIAATSSSCQQADAVAQDTEVLPPSGSCLS 86
Query: 104 SSLGSIIWVQKPPHGRPG--VYHIRKDRLGSFHTYPDLGGPFQSLNEAEDVISSHI-NKL 160
SS S +W + H + +++IR D GSFHTYPD+GGPFQS EA+ I ++ +
Sbjct: 87 SSPASHVWAR---HVKDWGLIFYIRVDLQGSFHTYPDVGGPFQSSQEADKAIDRYLEDHR 143
Query: 161 YPPVKFEERAGESYVDMIIRKALYWPDGTRKKCSKAEAFQNVNNNMNQLAKVILDMYNDD 220
P + + S ++ +IR+ LYWPDGT K+ +K+ A M+Q + ++D YNDD
Sbjct: 144 DPKMHIGQNDDISSMENVIRRCLYWPDGTIKRRTKSFATWEAKKRMHQFIQALVDKYNDD 203
Query: 221 HNLL 224
HNLL
Sbjct: 204 HNLL 207
>Os08g0495200 Conserved hypothetical protein
Length = 227
Score = 105 bits (261), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 70/211 (33%), Positives = 119/211 (56%), Gaps = 15/211 (7%)
Query: 155 SHINKLYPPVKFEERAGESYVDMIIRKALYWPDGTRKKCSKAEAFQNVNNNMNQLAKVIL 214
H++KL ++ ++ G S +D+I+R+++YWPDG+ KK +K+ A + + M QL + ++
Sbjct: 20 QHLHKL--CWRWLKQDGVSDMDIIVRQSIYWPDGSIKKRTKSYATEKTHKRMCQLVQALV 77
Query: 215 DMYNDDHNLLEDLAFELKGVINYEPIIESRRWFDHINFTATTKGLNGLDS--DHLFFAEA 272
D YN+DHNL DLA L+ V++Y+ + + + H+NFT TK + LD+ D+LFF E
Sbjct: 78 DKYNEDHNLFGDLAHMLQDVLHYQSVRDKFMGYYHLNFTTKTKEADDLDAGIDNLFFVEI 137
Query: 273 -MSLKGE-KDYVVTCCSLISSDDNGN---CYTC-KIGNKSMKHPSDVNSYVGGHCYIKGI 326
S +G+ ++ +V C +++ DN CY C G+ MKHP D Y GGH +
Sbjct: 138 RRSGRGKHEEMLVNCFCMVNPTDNDEDKICYGCANQGSVDMKHP-DPCKYDGGHLDMGRP 196
Query: 327 YDTIVXXXXXXXXXXXXQ----RLRKMYQGL 353
++ + + ++R MY+GL
Sbjct: 197 FECVEEWSDSEDDAEYVKTKEAKIRHMYEGL 227
>Os10g0494950 Conserved hypothetical protein
Length = 406
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 106/201 (52%), Gaps = 13/201 (6%)
Query: 122 VYHIRKDRLGSFHTYPDLGGPFQSLNEAEDVISSHINKLYPPVKFEERAGESYVDMIIRK 181
+++IR D GS TYPD+GGPFQ ++EA+D I +++L + + S VD +I
Sbjct: 135 LFYIRIDPRGSCWTYPDVGGPFQRVDEADDAIKCFLDELQHGARCTQSGEFSRVDRMIHD 194
Query: 182 ALYWPDGTRKKCSKAEAFQNVNNNMNQLAKVILDMYNDDHNLLEDLAFELKGVINYEPII 241
++ G K+ + + + + L + ILD YNDD+ L + A+EL+ +++ +
Sbjct: 195 CKHYLYGPPKRDPSSPSSKTTYDEKQYLVQAILDQYNDDNKLFGNHAYELEDLVSRQLFC 254
Query: 242 ESRRWFDHINFTATTKGLNGLDSDHLFFAEAMSLKGEKDYVVTC-CSLISSDDNGNCYTC 300
E+ + KG + S LFFAE ++ + V+C C + + + G+CY C
Sbjct: 255 ENSK----------QKGADD-SSGKLFFAEVTHVQRRMAWKVSCFCKIDTEVNGGHCYGC 303
Query: 301 K-IGNKSMKHPSDVNSYVGGH 320
+ G MKHP + N+Y GGH
Sbjct: 304 RNKGTPPMKHPQNTNAYAGGH 324
>Os08g0495300 Conserved hypothetical protein
Length = 243
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 62/101 (61%), Gaps = 6/101 (5%)
Query: 225 EDLAFELKGVINYEPIIESRRWFDHINFTATTKGLNGLD--SDHLFFAEA--MSLKGEKD 280
EDLA +LK V++Y+PI E+ W+ H+NFTA TK +GLD SD+LFF E M + ++
Sbjct: 79 EDLALKLKDVLHYQPICENHIWYYHLNFTAKTKEADGLDSTSDNLFFVEVKRMGIGNYEE 138
Query: 281 YVVTCCSLISSDDNGNCYTC-KIGNKSMKHPSDVNSYVGGH 320
+V+C +++ D+ C C G MKHP D + Y GH
Sbjct: 139 MLVSCFCMVNPDNGKPCKGCTNNGTVDMKHP-DTDEYFAGH 178
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.318 0.136 0.420
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 13,837,690
Number of extensions: 621588
Number of successful extensions: 1894
Number of sequences better than 1.0e-10: 10
Number of HSP's gapped: 1869
Number of HSP's successfully gapped: 10
Length of query: 364
Length of database: 17,035,801
Length adjustment: 102
Effective length of query: 262
Effective length of database: 11,709,973
Effective search space: 3068012926
Effective search space used: 3068012926
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 157 (65.1 bits)