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Os06g0134300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.8 (0.0147) R2 : 0.484
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.739 (0.036) R2dC : 0.479 R2C : 0.474
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0813 (0.0309) R2dN8 : 0.0101 R2N8 : 0.00469
σ : 0.277
deviance : 35.11
__
_____
C
peak time of C : 21.7
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
22.69 0.224 11.8 0.586 0.404 0.484 -0.14 -0.0942 0.151 18.3 0.03532 30 -- --
22.74 0.222 11.8 0.587 0.403 0.482 -0.171 -- 0.15 18.4 0.04 30 -- --
22.74 0.222 11.8 0.587 0.403 0.483 -- -0.11 0.15 18.4 0.03001 30 -- --
22.81 0.222 11.8 0.586 0.405 0.481 -- -- 0.149 18.4 0.03001 30 -- --
30.58 0.259 11.8 0.566 -- 0.515 -- -0.164 0.175 -- 0.04 29 -- --
27.68 0.247 11.8 0.521 0.737 -- -0.165 -- 0.14 21.6 -- -- -- --
27.79 0.247 11.8 0.527 0.737 -- -- -- 0.14 21.6 -- -- -- --
30.75 0.259 11.8 0.56 -- 0.514 -- -- 0.173 -- 0.04 28 -- --
31.47 0.261 11.8 -- 0.42 0.409 -- -- 0.0918 19.1 1.17 46 -- --
60.02 0.362 11.8 0.533 -- -- -- -- 0.139 -- -- -- -- --
35.11 0.277 11.8 -- 0.739 -- -- -- 0.0813 21.7 -- -- -- --
38.82 0.291 11.8 -- -- 0.513 -- -- 0.0859 -- 1.385 22 -- --
67.52 0.384 11.8 -- -- -- -- -- 0.0795 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 20.33 radiation 1.0 30 > th dose independent rect. 14 19
3 20.77 radiation 1.0 30 > th dose independent rect. 17 16
7 21.07 temperature 15.0 10 > th dose dependent rect. 5 4
10 21.12 temperature 10.0 270 > th dose dependent rect. 3 14
11 21.13 temperature 20.0 720 > th dose dependent rect. 4 3
14 21.16 radiation 1.0 30 < th dose independent sin 12 NA
17 21.22 radiation 1.0 30 > th dose independent sin 12 NA
19 21.24 radiation 1.0 30 < th dose dependent sin 12 NA
24 21.27 radiation 1.0 30 > th dose independent rect. 12 21
28 21.31 radiation 1.0 30 > th dose independent rect. 5 4
56 21.53 temperature 10.0 10 > th dose dependent rect. 5 15
73 21.62 radiation 10.0 270 < th dose independent rect. 17 10
74 21.64 atmosphere 995.0 270 > th dose independent rect. 17 10
75 21.65 humidity 50.0 270 > th dose independent rect. 17 10
76 21.67 precipitation 0.1 270 < th dose independent rect. 3 14
77 21.67 temperature 30.0 90 < th dose independent rect. 9 19
80 21.67 precipitation 0.1 270 < th dose dependent rect. 3 14
88 21.71 temperature 20.0 10 > th dose independent rect. 5 4
89 21.71 temperature 30.0 270 < th dose independent rect. 7 20
94 21.73 radiation 20.0 270 < th dose dependent rect. 17 10
100 21.75 temperature 30.0 270 < th dose independent rect. 17 10
106 21.78 wind 9.0 270 < th dose independent rect. 17 10
110 21.80 precipitation 0.1 270 < th dose independent rect. 17 10
111 21.80 precipitation 0.1 270 < th dose dependent rect. 17 10
120 21.84 temperature 10.0 270 > th dose independent rect. 17 10
124 21.84 temperature 10.0 270 > th dose independent rect. 3 14
125 21.84 atmosphere 1015.0 270 < th dose independent rect. 3 14
148 21.98 atmosphere 995.0 30 > th dose independent rect. 9 19
149 21.99 precipitation 0.1 30 < th dose independent rect. 14 19
152 21.99 precipitation 0.1 30 < th dose dependent rect. 14 19
163 22.02 temperature 10.0 1440 > th dose independent rect. 10 5
166 22.02 temperature 10.0 1440 > th dose independent rect. 15 19
173 22.04 temperature 10.0 30 > th dose independent rect. 9 5
175 22.04 atmosphere 995.0 30 > th dose independent rect. 9 5
176 22.04 atmosphere 1015.0 30 < th dose independent rect. 9 5
177 22.04 precipitation 0.1 30 < th dose independent rect. 9 5
178 22.04 temperature 10.0 30 > th dose independent rect. 14 19
182 22.04 precipitation 0.1 30 < th dose dependent rect. 9 5
185 22.05 radiation 1.0 90 < th dose dependent rect. 5 23
187 22.07 wind 9.0 270 < th dose independent rect. 3 14
191 22.09 atmosphere 1000.0 10 > th dose dependent rect. 5 4
193 22.10 wind 9.0 30 < th dose independent rect. 14 19
207 22.11 temperature 15.0 30 > th dose independent rect. 9 19
211 22.13 radiation 40.0 30 < th dose independent rect. 14 19
212 22.14 wind 1.0 30 > th dose independent rect. 9 5
215 22.14 wind 7.0 90 < th dose dependent rect. 4 5
217 22.15 wind 7.0 10 < th dose dependent rect. 5 4
230 22.19 wind 9.0 30 < th dose independent rect. 9 5
238 22.22 wind 5.0 30 < th dose independent rect. 4 5
239 22.22 radiation 30.0 90 < th dose independent rect. 4 5
252 22.26 radiation 1.0 30 > th dose independent rect. 9 5
253 22.26 atmosphere 995.0 270 > th dose independent rect. 7 20
255 22.26 radiation 1.0 90 < th dose independent rect. 5 23
261 22.27 atmosphere 1015.0 30 < th dose independent rect. 9 19
263 22.28 precipitation 0.1 30 < th dose independent rect. 4 5
264 22.28 precipitation 0.1 30 < th dose dependent rect. 4 5
277 22.31 temperature 10.0 30 > th dose independent rect. 4 5
279 22.31 temperature 30.0 30 < th dose independent rect. 4 5
280 22.31 humidity 50.0 30 > th dose independent rect. 4 5
282 22.31 atmosphere 995.0 30 > th dose independent rect. 4 5
283 22.31 atmosphere 1015.0 30 < th dose independent rect. 4 5
297 22.34 atmosphere 1005.0 10 > th dose independent rect. 5 4
306 22.35 precipitation 0.1 270 < th dose independent rect. 3 4
308 22.35 precipitation 0.1 270 < th dose dependent rect. 3 4
312 22.38 temperature 20.0 270 > th dose independent rect. 4 2
334 22.41 wind 9.0 30 < th dose independent rect. 9 19
350 22.45 precipitation 0.1 30 < th dose independent rect. 9 19
351 22.45 precipitation 0.1 30 < th dose dependent rect. 9 19
353 22.46 radiation 10.0 270 < th dose independent rect. 3 4
363 22.48 humidity 80.0 270 > th dose independent rect. 3 4
366 22.48 wind 9.0 270 < th dose independent rect. 7 20
397 22.51 temperature 10.0 270 > th dose independent rect. 3 4
402 22.51 atmosphere 995.0 270 > th dose independent rect. 3 4
403 22.51 atmosphere 1015.0 270 < th dose independent rect. 3 4
413 22.51 temperature 10.0 270 > th dose independent rect. 7 20
416 22.52 precipitation 0.1 270 < th dose independent rect. 7 20
419 22.52 precipitation 0.1 270 < th dose dependent rect. 7 20
435 22.55 humidity 50.0 270 > th dose dependent rect. 3 4
436 22.55 radiation 40.0 270 < th dose dependent rect. 3 4
440 22.56 humidity 90.0 30 < th dose independent rect. 9 5
445 22.56 temperature 10.0 10 > th dose dependent rect. 14 19
469 22.58 wind 9.0 270 < th dose dependent rect. 4 2
510 22.64 wind 9.0 270 < th dose independent rect. 9 1
534 22.66 temperature 10.0 270 > th dose independent rect. 9 1
535 22.66 atmosphere 995.0 270 > th dose independent rect. 9 1
536 22.66 atmosphere 1015.0 270 < th dose independent rect. 9 1
537 22.66 precipitation 0.1 270 < th dose independent rect. 9 1
543 22.66 temperature 10.0 270 > th dose independent rect. 10 23
544 22.66 precipitation 0.1 270 < th dose dependent rect. 9 1
548 22.66 temperature 10.0 270 > th dose dependent rect. 18 9
604 22.71 atmosphere 1015.0 270 < th dose independent rect. 7 20
610 22.71 radiation 10.0 270 < th dose dependent rect. 8 19
616 22.72 radiation 1.0 30 > th dose dependent rect. 17 16
618 22.73 humidity 50.0 270 > th dose independent rect. 9 1
621 22.73 temperature 10.0 1440 > th dose independent rect. 5 5
624 22.73 atmosphere 995.0 1440 > th dose independent rect. 5 5
625 22.73 atmosphere 1015.0 1440 < th dose independent rect. 5 5
628 22.73 temperature 10.0 1440 > th dose independent rect. 10 19
631 22.73 humidity 50.0 270 > th dose independent rect. 7 20
645 22.74 radiation 1.0 30 < th dose dependent rect. 18 22
649 22.75 atmosphere 995.0 30 > th dose independent rect. 14 19
681 22.77 atmosphere 1000.0 270 > th dose dependent rect. 4 2
685 22.77 radiation 1.0 30 < th dose dependent rect. 18 20
720 22.81 radiation 1.0 270 > th dose independent rect. 9 1
730 22.81 wind 9.0 90 < th dose dependent rect. 9 19
740 22.82 temperature 10.0 10 > th dose dependent rect. 20 9
750 22.84 atmosphere 1005.0 270 > th dose independent rect. 4 2
753 22.84 humidity 50.0 30 > th dose independent rect. 9 5
764 22.85 radiation 1.0 270 < th dose dependent rect. 4 1
774 22.86 radiation 1.0 30 < th dose dependent rect. 20 18
812 22.87 radiation 1.0 90 > th dose dependent rect. 17 14
815 22.88 radiation 1.0 30 < th dose independent rect. 20 18
843 22.89 humidity 90.0 10 < th dose dependent rect. 14 19
868 22.92 temperature 30.0 10 < th dose independent rect. 9 5
869 22.92 temperature 30.0 270 < th dose independent rect. 7 7
874 22.92 radiation 1.0 30 < th dose dependent rect. 18 18
890 22.93 humidity 50.0 90 > th dose independent rect. 9 19
903 22.94 humidity 50.0 30 > th dose independent rect. 14 19
908 22.94 radiation 1.0 30 < th dose dependent rect. 18 14
913 22.95 wind 1.0 270 > th dose independent rect. 9 1
920 22.95 humidity 70.0 10 > th dose independent rect. 18 11
927 22.95 temperature 10.0 10 > th dose dependent rect. 5 13
933 22.95 radiation 1.0 30 < th dose dependent rect. 20 23
944 22.96 humidity 50.0 90 > th dose dependent rect. 18 10
949 22.97 wind 9.0 270 < th dose independent rect. 7 6
953 22.97 radiation 1.0 30 < th dose dependent rect. 20 16
971 22.99 radiation 1.0 30 < th dose independent rect. 20 16
976 22.99 radiation 1.0 30 < th dose dependent rect. 18 12
977 22.99 radiation 1.0 30 < th dose dependent rect. 20 12