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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os08g0495300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.15 (0.0144) R2 : 0.0154
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0808 (0.0303) R2dN8 : 0.0199 R2N8 : 0.0154
σ : 0.271
deviance : 33.61
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
31.92 0.265 3.06 0.792 0.0447 -0.641 0.272 4.9 -0.0587 11.3 29.28 3698 -- --
32.81 0.267 3.13 0.0321 0.0469 -0.094 0.231 -- -0.0377 10.8 26.19 9051 -- --
32.22 0.264 3.06 0.79 0.047 -0.656 -- 4.99 -0.0698 10.2 29.46 3552 -- --
33.05 0.268 3.14 0.0423 0.0512 -0.0883 -- -- -0.0499 10.3 26.69 8972 -- --
32.35 0.265 3.06 0.809 -- -0.672 -- 5.07 -0.0661 -- 29.39 3554 -- --
33.11 0.27 3.15 -0.00543 0.0595 -- 0.261 -- -0.0809 11 -- -- -- --
33.39 0.271 3.15 0.00468 0.0604 -- -- -- -0.0803 10.1 -- -- -- --
33.21 0.268 3.14 0.0345 -- -0.0937 -- -- -0.0513 -- 28.9 9058 -- --
33.03 0.268 3.14 -- 0.0542 -0.0934 -- -- -0.0544 9.83 29.1 9010 -- --
33.61 0.271 3.15 0.00389 -- -- -- -- -0.0804 -- -- -- -- --
33.39 0.27 3.15 -- 0.0604 -- -- -- -0.0809 10.1 -- -- -- --
33.23 0.268 3.14 -- -- -0.0976 -- -- -0.0533 -- 29.1 9055 -- --
33.61 0.271 3.15 -- -- -- -- -- -0.0808 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 30.29 radiation 10.0 10 > th dose independent rect. 6 1
27 30.29 radiation 10.0 10 > th dose dependent rect. 6 1
57 31.35 temperature 25.0 720 > th dose dependent rect. 23 10
61 31.47 atmosphere 1000.0 10 > th dose independent rect. 21 23
62 31.47 temperature 25.0 720 > th dose dependent rect. 2 6
64 31.50 wind 5.0 14400 < th dose independent rect. 11 1
65 31.51 temperature 30.0 270 < th dose independent rect. 22 23
66 31.52 wind 3.0 30 < th dose dependent rect. 6 1
82 31.54 atmosphere 1010.0 10 < th dose dependent rect. 20 1
84 31.56 wind 9.0 14400 > th dose dependent rect. 13 1
86 31.57 atmosphere 1005.0 30 > th dose dependent rect. 6 1
88 31.58 humidity 80.0 10 > th dose dependent rect. 20 1
89 31.59 wind 5.0 14400 > th dose independent rect. 11 1
90 31.59 wind 9.0 10 < th dose independent rect. 21 23
91 31.59 temperature 10.0 30 > th dose dependent rect. 21 22
92 31.60 wind 1.0 43200 > th dose independent rect. 9 2
95 31.62 temperature 30.0 10 < th dose dependent rect. 20 1
99 31.63 wind 9.0 30 > th dose independent rect. 18 8
108 31.63 wind 3.0 14400 > th dose dependent rect. 11 1
110 31.63 radiation 1.0 270 < th dose dependent rect. 22 23
120 31.65 temperature 20.0 10 > th dose independent rect. 20 1
122 31.66 wind 3.0 30 > th dose independent rect. 19 2
123 31.66 wind 9.0 30 > th dose independent rect. 18 4
151 31.69 wind 7.0 14400 < th dose dependent rect. 11 1
154 31.70 wind 7.0 10 < th dose independent rect. 20 1
156 31.70 humidity 60.0 10 > th dose dependent rect. 20 1
158 31.71 atmosphere 1000.0 10 > th dose independent rect. 20 1
161 31.72 wind 9.0 14400 < th dose independent rect. 13 1
163 31.72 temperature 10.0 10 > th dose independent rect. 20 1
165 31.72 temperature 30.0 10 < th dose independent rect. 20 1
166 31.72 humidity 50.0 10 > th dose independent rect. 20 1
170 31.72 atmosphere 1010.0 10 < th dose independent rect. 20 1
172 31.72 radiation 1.0 10 < th dose independent rect. 20 1
177 31.72 precipitation 0.1 10 < th dose independent rect. 20 1
179 31.72 wind 9.0 10 > th dose independent rect. 18 2
184 31.72 temperature 10.0 10 > th dose independent rect. 21 23
186 31.72 radiation 1.0 10 < th dose dependent rect. 20 1
191 31.72 precipitation 0.1 10 < th dose dependent rect. 20 1
192 31.73 temperature 25.0 90 < th dose independent rect. 5 15
193 31.73 wind 9.0 10 < th dose dependent rect. 20 1
194 31.73 humidity 80.0 30 > th dose dependent rect. 6 1
199 31.74 wind 9.0 10 > th dose dependent rect. 18 1
204 31.74 wind 7.0 10 > th dose dependent rect. 18 11
211 31.76 temperature 25.0 10 > th dose independent rect. 10 10
212 31.76 radiation 1.0 270 < th dose independent rect. 22 23
215 31.76 wind 9.0 30 > th dose dependent rect. 18 8
225 31.77 wind 1.0 43200 < th dose independent rect. 9 1
229 31.77 wind 1.0 10 > th dose dependent rect. 20 1
233 31.77 radiation 1.0 43200 < th dose dependent rect. 20 2
237 31.78 temperature 25.0 90 < th dose independent rect. 6 1
238 31.78 humidity 90.0 10 < th dose independent rect. 2 3
240 31.78 humidity 90.0 10 < th dose dependent rect. 2 3
241 31.78 wind 7.0 10 > th dose dependent rect. 18 4
257 31.79 temperature 10.0 10 > th dose dependent rect. 20 1
258 31.79 atmosphere 995.0 10 > th dose dependent rect. 20 1
259 31.79 radiation 1.0 1440 < th dose dependent rect. 21 1
260 31.79 wind 9.0 90 > th dose dependent rect. 18 4
261 31.80 wind 9.0 14400 > th dose independent rect. 13 1
262 31.80 humidity 80.0 720 < th dose independent rect. 8 1
267 31.80 temperature 25.0 30 > th dose dependent rect. 20 3
275 31.80 temperature 30.0 30 < th dose dependent rect. 2 19
282 31.81 humidity 90.0 14400 < th dose dependent rect. 2 2
287 31.82 temperature 30.0 1440 > th dose independent rect. 15 20
288 31.82 atmosphere 1010.0 10 < th dose independent rect. 21 23
303 31.83 humidity 70.0 14400 > th dose independent rect. 8 1
304 31.83 humidity 70.0 14400 < th dose independent rect. 8 1
307 31.83 temperature 25.0 90 < th dose independent rect. 2 18
310 31.84 humidity 80.0 90 < th dose independent rect. 24 3
312 31.84 temperature 25.0 10 > th dose independent rect. 8 12
313 31.84 temperature 30.0 1440 < th dose independent rect. 15 20
316 31.84 humidity 80.0 90 < th dose dependent rect. 24 3
320 31.85 radiation 10.0 720 > th dose independent rect. 7 2
322 31.85 temperature 25.0 720 > th dose independent rect. 4 5
323 31.85 humidity 80.0 90 < th dose independent rect. 24 5
328 31.85 wind 1.0 14400 < th dose dependent rect. 6 1
345 31.86 temperature 25.0 10 > th dose independent rect. 20 12
374 31.87 atmosphere 1005.0 10 < th dose independent rect. 18 2
378 31.87 atmosphere 995.0 30 > th dose independent rect. 2 19
383 31.87 humidity 90.0 10 < th dose dependent rect. 20 1
392 31.88 wind 9.0 14400 > th dose independent rect. 16 1
393 31.88 wind 1.0 10 < th dose independent rect. 6 1
394 31.88 wind 1.0 14400 < th dose independent rect. 6 1
409 31.89 radiation 1.0 90 > th dose independent rect. 7 23
411 31.89 radiation 1.0 1440 < th dose dependent rect. 6 1
419 31.90 wind 9.0 14400 > th dose dependent rect. 16 1
420 31.90 temperature 30.0 4320 > th dose dependent rect. 15 1
426 31.90 atmosphere 1005.0 30 > th dose dependent rect. 2 5
451 31.91 humidity 90.0 10 < th dose independent rect. 20 1
467 31.91 temperature 25.0 90 > th dose independent rect. 23 20
478 31.92 humidity 50.0 4320 > th dose independent rect. 14 1
479 31.92 atmosphere 1015.0 4320 < th dose independent rect. 11 1
492 31.92 temperature 10.0 30 > th dose dependent rect. 21 5
500 31.93 temperature 30.0 1440 > th dose independent sin 11 NA
501 31.93 temperature 30.0 1440 < th dose independent sin 11 NA
502 31.93 atmosphere 1015.0 4320 > th dose independent rect. 11 1
504 31.93 humidity 50.0 4320 < th dose independent rect. 15 2
508 31.93 atmosphere 1005.0 90 < th dose independent rect. 17 3
513 31.93 atmosphere 995.0 43200 > th dose independent rect. 17 5
523 31.93 precipitation 0.1 10 < th dose independent rect. 21 23
549 31.93 temperature 30.0 30 < th dose dependent rect. 6 15
555 31.93 precipitation 0.1 10 < th dose dependent rect. 21 23
560 31.94 precipitation 0.1 1440 < th dose independent rect. 21 1
561 31.94 temperature 30.0 1440 > th dose independent rect. 15 4
563 31.94 atmosphere 995.0 43200 < th dose independent rect. 17 5
567 31.94 atmosphere 995.0 43200 < th dose independent rect. 16 7
570 31.94 atmosphere 995.0 43200 > th dose independent rect. 15 9
571 31.94 atmosphere 995.0 43200 < th dose independent rect. 15 9
583 31.94 atmosphere 995.0 270 > th dose independent rect. 22 23
586 31.94 atmosphere 1015.0 4320 > th dose dependent rect. 10 1
589 31.94 precipitation 0.1 1440 < th dose dependent rect. 21 1
599 31.94 radiation 1.0 14400 < th dose dependent rect. 2 3
608 31.94 atmosphere 995.0 43200 < th dose dependent rect. 17 5
609 31.94 radiation 30.0 1440 < th dose dependent rect. 18 6
617 31.95 temperature 10.0 1440 > th dose independent rect. 22 5
620 31.95 temperature 30.0 1440 < th dose independent rect. 22 5
624 31.95 humidity 50.0 1440 > th dose independent rect. 22 5
632 31.95 atmosphere 995.0 1440 > th dose independent rect. 22 5
633 31.95 radiation 1.0 1440 < th dose independent rect. 22 5
657 31.95 temperature 10.0 1440 > th dose independent rect. 3 19
660 31.95 wind 1.0 43200 < th dose dependent rect. 9 1
661 31.95 temperature 30.0 30 < th dose dependent rect. 6 1
670 31.95 temperature 20.0 30 > th dose dependent rect. 4 3
671 31.95 radiation 1.0 1440 < th dose dependent rect. 22 5
680 31.95 temperature 10.0 30 > th dose dependent rect. 8 11
686 31.96 humidity 50.0 4320 < th dose independent rect. 12 5
691 31.96 temperature 30.0 1440 < th dose independent rect. 15 7
721 31.96 humidity 90.0 14400 > th dose dependent rect. 5 1
740 31.97 temperature 10.0 1440 > th dose independent rect. 21 1
743 31.97 temperature 30.0 1440 < th dose independent rect. 21 1
747 31.97 humidity 50.0 1440 > th dose independent rect. 21 1
753 31.97 atmosphere 995.0 1440 > th dose independent rect. 21 1
754 31.97 radiation 1.0 1440 < th dose independent rect. 21 1
775 31.97 temperature 10.0 30 > th dose independent rect. 21 5
776 31.97 temperature 30.0 30 < th dose independent rect. 21 5
777 31.97 humidity 50.0 30 > th dose independent rect. 21 5
780 31.97 atmosphere 995.0 30 > th dose independent rect. 21 5
781 31.97 radiation 1.0 30 < th dose independent rect. 21 5
796 31.97 temperature 30.0 1440 < th dose independent rect. 15 15
799 31.97 temperature 10.0 30 > th dose independent rect. 2 19
801 31.97 atmosphere 1015.0 30 < th dose independent rect. 2 19
803 31.97 temperature 10.0 1440 > th dose independent rect. 22 23
810 31.97 radiation 1.0 14400 < th dose dependent rect. 4 1
816 31.97 radiation 1.0 30 < th dose dependent rect. 21 5
823 31.97 radiation 1.0 14400 < th dose dependent rect. 18 11
824 31.97 temperature 20.0 30 > th dose dependent rect. 23 21
830 31.98 temperature 30.0 1440 < th dose independent rect. 15 4
833 31.98 wind 9.0 30 < th dose independent rect. 21 5
834 31.98 precipitation 0.1 30 < th dose independent rect. 21 5
847 31.98 wind 1.0 30 > th dose independent rect. 2 19
849 31.98 temperature 25.0 4320 > th dose dependent rect. 6 1
854 31.98 temperature 20.0 30 > th dose dependent rect. 2 5
856 31.98 precipitation 0.1 30 < th dose dependent rect. 21 5
858 31.98 humidity 80.0 14400 < th dose dependent rect. 3 6
877 31.99 humidity 80.0 1440 < th dose independent rect. 3 7
878 31.99 wind 7.0 10 < th dose independent rect. 8 11
882 31.99 radiation 30.0 4320 < th dose independent rect. 16 11
887 31.99 temperature 25.0 90 > th dose independent rect. 5 14
891 31.99 precipitation 0.1 30 < th dose independent rect. 2 19
897 31.99 radiation 30.0 1440 < th dose dependent rect. 18 1
898 31.99 precipitation 0.1 43200 > th dose dependent rect. 20 1
903 31.99 precipitation 0.1 43200 > th dose dependent rect. 20 3
909 31.99 atmosphere 995.0 43200 < th dose dependent rect. 15 8
911 31.99 radiation 1.0 30 < th dose dependent rect. 2 19
912 31.99 precipitation 0.1 30 < th dose dependent rect. 2 19
915 32.00 temperature 25.0 720 > th dose independent rect. 8 1
916 32.00 humidity 90.0 14400 < th dose independent rect. 24 1
917 32.00 precipitation 0.1 43200 < th dose independent rect. 20 1
921 32.00 temperature 25.0 10 > th dose independent rect. 4 3
955 32.00 radiation 1.0 1440 < th dose dependent rect. 18 1
957 32.00 precipitation 0.1 43200 < th dose dependent rect. 20 1
963 32.00 radiation 1.0 1440 < th dose dependent rect. 18 4
966 32.00 radiation 1.0 1440 < th dose dependent rect. 18 6
971 32.01 humidity 90.0 43200 > th dose independent rect. 5 1
972 32.01 humidity 90.0 43200 < th dose independent rect. 5 1