BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os08g0345800 Os08g0345800|AK103906
(479 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os08g0345800 Similar to Glucose-1-phosphate adenylyltransfe... 927 0.0
Os09g0298200 Similar to Brittle 2 780 0.0
Os03g0735000 Similar to Glucose-1-phosphate adenylyltransfe... 506 e-143
Os07g0243200 Similar to ADP-glucose pyrophosphorylase large... 488 e-138
Os01g0633100 Similar to ADP-glucose pyrophosphorylase subun... 436 e-122
Os05g0580000 Similar to ADP-glucose pyrophosphorylase (EC 2... 433 e-121
>Os08g0345800 Similar to Glucose-1-phosphate adenylyltransferase small subunit,
chloroplast precursor (EC 2.7.7.27) (ADP-glucose
synthase) (ADP-glucose pyrophosphorylase) (AGPASE B)
(Alpha-D-glucose-1-phosphate adenyl transferase)
Length = 479
Score = 927 bits (2395), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 463/479 (96%), Positives = 463/479 (96%)
Query: 1 MNVLASKIFPSRSNVASEQQQSKREKATIDDAKNSSKNKNLDRSVDESVLGIILGGGAGT 60
MNVLASKIFPSRSNVASEQQQSKREKATIDDAKNSSKNKNLDRSVDESVLGIILGGGAGT
Sbjct: 1 MNVLASKIFPSRSNVASEQQQSKREKATIDDAKNSSKNKNLDRSVDESVLGIILGGGAGT 60
Query: 61 RLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYGNN 120
RLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYGNN
Sbjct: 61 RLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYGNN 120
Query: 121 IGGYKNEGFVEVLAAQQSPDNPNWFQGTADAVRQYLWLFEEHNVMEFLILAGDHLYRMDY 180
IGGYKNEGFVEVLAAQQSPDNPNWFQGTADAVRQYLWLFEEHNVMEFLILAGDHLYRMDY
Sbjct: 121 IGGYKNEGFVEVLAAQQSPDNPNWFQGTADAVRQYLWLFEEHNVMEFLILAGDHLYRMDY 180
Query: 181 EKFIQAHRETDSDITVAALPMDEKRATAFGLMKIDEEGRIVEFAEKPKGEQLKAMMVDTT 240
EKFIQAHRETDSDITVAALPMDEKRATAFGLMKIDEEGRIVEFAEKPKGEQLKAMMVDTT
Sbjct: 181 EKFIQAHRETDSDITVAALPMDEKRATAFGLMKIDEEGRIVEFAEKPKGEQLKAMMVDTT 240
Query: 241 ILGLDDVRAKEMPYIASMGIYVISKNVMLQLLREQFPGANDFGSEVIPGATNIGMRVQAY 300
ILGLDDVRAKEMPYIASMGIYVISKNVMLQLLREQFPGANDFGSEVIPGATNIGMRVQAY
Sbjct: 241 ILGLDDVRAKEMPYIASMGIYVISKNVMLQLLREQFPGANDFGSEVIPGATNIGMRVQAY 300
Query: 301 LYDGYWEDIGTIEAFYNANLGITKKPVPDFSFYDRSAPIYTQPRHLPPSKVLDADVTDSV 360
LYDGYWEDIGTIEAFYNANLGITKKPVPDFSFYDRSAPIYTQPRHLPPSKVLDADVTDSV
Sbjct: 301 LYDGYWEDIGTIEAFYNANLGITKKPVPDFSFYDRSAPIYTQPRHLPPSKVLDADVTDSV 360
Query: 361 IGEGCVIKNCKIHHSVVGLRSCISEGAIIEDSLLMGADYYETEADXXXXXXXXXXXXXXX 420
IGEGCVIKNCKIHHSVVGLRSCISEGAIIEDSLLMGADYYETEAD
Sbjct: 361 IGEGCVIKNCKIHHSVVGLRSCISEGAIIEDSLLMGADYYETEADKKLLGEKGGIPIGIG 420
Query: 421 XNCHIRRAIIDKNARIGDNVKIINVDNVQEAARETDGYFIKSGIVTVIKDALLPSGTVI 479
NCHIRRAIIDKNARIGDNVKIINVDNVQEAARETDGYFIKSGIVTVIKDALLPSGTVI
Sbjct: 421 KNCHIRRAIIDKNARIGDNVKIINVDNVQEAARETDGYFIKSGIVTVIKDALLPSGTVI 479
>Os09g0298200 Similar to Brittle 2
Length = 500
Score = 780 bits (2014), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/444 (86%), Positives = 409/444 (92%)
Query: 36 SKNKNLDRSVDESVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNI 95
S LD SVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSN+
Sbjct: 57 SSQTCLDPDASTSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNV 116
Query: 96 SKIYVLTQFNSASLNRHLSRAYGNNIGGYKNEGFVEVLAAQQSPDNPNWFQGTADAVRQY 155
SKIYVLTQFNSASLNRHLSRAYGNNIGGYKNEGFVEVLAAQQSP+NPNWFQGTADAVRQY
Sbjct: 117 SKIYVLTQFNSASLNRHLSRAYGNNIGGYKNEGFVEVLAAQQSPENPNWFQGTADAVRQY 176
Query: 156 LWLFEEHNVMEFLILAGDHLYRMDYEKFIQAHRETDSDITVAALPMDEKRATAFGLMKID 215
LWLFEEHNVMEFLILAGDHLYRMDY+KFIQAHRET++DITVAALPMDE+RATAFGLMKID
Sbjct: 177 LWLFEEHNVMEFLILAGDHLYRMDYQKFIQAHRETNADITVAALPMDEERATAFGLMKID 236
Query: 216 EEGRIVEFAEKPKGEQLKAMMVDTTILGLDDVRAKEMPYIASMGIYVISKNVMLQLLREQ 275
+EGRI+EFAEKPKGE+LK+MMVDTTILGLD RAKE+PYIASMGIYV SK+VML+LLR+
Sbjct: 237 DEGRIIEFAEKPKGEKLKSMMVDTTILGLDTERAKELPYIASMGIYVFSKDVMLKLLRQN 296
Query: 276 FPGANDFGSEVIPGATNIGMRVQAYLYDGYWEDIGTIEAFYNANLGITKKPVPDFSFYDR 335
FP ANDFGSEVIPGAT IGMRVQAYLYDGYWEDIGTIEAFYNANLGITKKPVPDFSFYDR
Sbjct: 297 FPAANDFGSEVIPGATEIGMRVQAYLYDGYWEDIGTIEAFYNANLGITKKPVPDFSFYDR 356
Query: 336 SAPIYTQPRHLPPSKVLDADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDSLLM 395
SA IYTQPR+LPPSKVLDADVTDSVIGEGCVI++C I+HSVVGLRSCISEGA+IEDSLLM
Sbjct: 357 SAAIYTQPRYLPPSKVLDADVTDSVIGEGCVIRHCTINHSVVGLRSCISEGAVIEDSLLM 416
Query: 396 GADYYETEADXXXXXXXXXXXXXXXXNCHIRRAIIDKNARIGDNVKIINVDNVQEAARET 455
GADYYETE D N HIR+AIIDKNARIG+NVKIINVDN+QEA+RET
Sbjct: 417 GADYYETETDKKALSETGGIPIGIGKNAHIRKAIIDKNARIGENVKIINVDNIQEASRET 476
Query: 456 DGYFIKSGIVTVIKDALLPSGTVI 479
DGYFIKSGIVTVIKDAL+PSGTVI
Sbjct: 477 DGYFIKSGIVTVIKDALIPSGTVI 500
>Os03g0735000 Similar to Glucose-1-phosphate adenylyltransferase large subunit 2
(EC 2.7.7.27) (ADP-glucose synthase) (ADP-glucose
pyrophosphorylase) (AGPASE S)
(Alpha-D-glucose-1-phosphate adenyl transferase) (BLPL)
(Fragment)
Length = 511
Score = 506 bits (1302), Expect = e-143, Method: Compositional matrix adjust.
Identities = 240/438 (54%), Positives = 327/438 (74%), Gaps = 7/438 (1%)
Query: 47 ESVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNS 106
++V+ +ILGGGAGTRL+PLTK+RAKPAVP+G YRLID+P+SNC+NS I+K+Y+LTQFNS
Sbjct: 76 KTVVAVILGGGAGTRLFPLTKRRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQFNS 135
Query: 107 ASLNRHLSRAYGNNIGGYKNEGFVEVLAAQQSP--DNPNWFQGTADAVRQYLWLFEEHNV 164
ASLNRHLSRAY + G +GFVEVLAA Q+P + WFQGTADAVRQ+ WLF++
Sbjct: 136 ASLNRHLSRAYNFSNGVAFGDGFVEVLAATQTPGSEGKRWFQGTADAVRQFDWLFDDAKA 195
Query: 165 ME---FLILAGDHLYRMDYEKFIQAHRETDSDITVAALPMDEKRATAFGLMKIDEEGRIV 221
+ LIL+GDHLYRMDY F+Q+HR+ +DI++ LP+D+ RA+ FGLMKID+ GR++
Sbjct: 196 KDIDDVLILSGDHLYRMDYMDFVQSHRQRGADISICCLPIDDSRASDFGLMKIDDTGRVI 255
Query: 222 EFAEKPKGEQLKAMMVDTTILGLDDVRAKEMPYIASMGIYVISKNVMLQLLREQFPGAND 281
F+EKPKG+ LKAM VDTT+LGL AKE PYIASMG+Y+ K ++L LLR +FP AND
Sbjct: 256 AFSEKPKGDDLKAMQVDTTVLGLPQDEAKEKPYIASMGVYIFKKEILLNLLRWRFPTAND 315
Query: 282 FGSEVIPGATNIGMRVQAYLYDGYWEDIGTIEAFYNANLGITKKPVPDFSFYDRSAPIYT 341
FGSE+IP A+ + V+AYL++ YWEDIGTI++F+ ANL + ++P P FSFYD + P+YT
Sbjct: 316 FGSEIIP-ASAKEINVKAYLFNDYWEDIGTIKSFFEANLSLAEQP-PRFSFYDANKPMYT 373
Query: 342 QPRHLPPSKVLDADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDSLLMGADYYE 401
R+LPPS + ++ +TDS+I GC + +C+I HSVVG+RS I ++D++++GAD+YE
Sbjct: 374 SRRNLPPSMINNSKITDSIISHGCFLDSCRIEHSVVGIRSRIGSNVHLKDTVMLGADFYE 433
Query: 402 TEADXXXXXXXXXXXXXXXXNCHIRRAIIDKNARIGDNVKIINVDNVQEAARETDGYFIK 461
T+ + N I+ IIDKNARIG NV I N + VQEA R ++G++I+
Sbjct: 434 TDLERGELLAEGKVPIGIGENTKIQNCIIDKNARIGKNVTISNSEGVQEADRTSEGFYIR 493
Query: 462 SGIVTVIKDALLPSGTVI 479
SGI V+K++++ G VI
Sbjct: 494 SGITIVLKNSIIADGLVI 511
>Os07g0243200 Similar to ADP-glucose pyrophosphorylase large subunit 2 (EC
2.7.7.27) (Fragment)
Length = 509
Score = 488 bits (1255), Expect = e-138, Method: Compositional matrix adjust.
Identities = 240/438 (54%), Positives = 307/438 (70%), Gaps = 7/438 (1%)
Query: 47 ESVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNS 106
++V IILGGGAGTRL+PLT+ RAKPAVP+G YRLIDIP+SNC+NS I+KIYVLTQFNS
Sbjct: 74 DTVASIILGGGAGTRLFPLTRTRAKPAVPVGGCYRLIDIPMSNCINSKINKIYVLTQFNS 133
Query: 107 ASLNRHLSRAYGNNIGGYKNEGFVEVLAAQQSP--DNPNWFQGTADAVRQYLWLFEE--- 161
SLNRH++R Y G +GFVEVLAA Q+ WFQGTADAVRQ+LWLFE+
Sbjct: 134 QSLNRHIARTYNIGEGVGFGDGFVEVLAATQTTGESGKRWFQGTADAVRQFLWLFEDARL 193
Query: 162 HNVMEFLILAGDHLYRMDYEKFIQAHRETDSDITVAALPMDEKRATAFGLMKIDEEGRIV 221
+ LIL+GDHLYRMDY F+Q H + +DI+VA +P+DE RA+ FGLMK D+ GRI
Sbjct: 194 KRIENILILSGDHLYRMDYMDFVQKHVDKGADISVACVPVDESRASDFGLMKTDKNGRIT 253
Query: 222 EFAEKPKGEQLKAMMVDTTILGLDDVRAKEMPYIASMGIYVISKNVMLQLLREQFPGAND 281
+F EKPK E LK+M +D GL A Y+ASMGIYV +++L+LLR +P AND
Sbjct: 254 DFLEKPKDESLKSMQLDMGTFGLRPEVADTCKYMASMGIYVFRTDILLRLLRGHYPTAND 313
Query: 282 FGSEVIPGATNIGMRVQAYLYDGYWEDIGTIEAFYNANLGITKKPVPDFSFYDRSAPIYT 341
FGSEVIP A VQAYL+DGYWEDIGTI++F+ ANL +T + P+F FYD PI+T
Sbjct: 314 FGSEVIPMAAK-DYNVQAYLFDGYWEDIGTIKSFFEANLALTDQS-PNFYFYDPVKPIFT 371
Query: 342 QPRHLPPSKVLDADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDSLLMGADYYE 401
PR LPP+KV + V +S++ GC + C + SV+G+RS + G ++D+++MGADYY+
Sbjct: 372 SPRFLPPTKVENCKVLNSIVSHGCFLTECSVDRSVIGVRSRLEPGVQLKDTMMMGADYYQ 431
Query: 402 TEADXXXXXXXXXXXXXXXXNCHIRRAIIDKNARIGDNVKIINVDNVQEAARETDGYFIK 461
TEA+ N IR IIDKNARIG NV I+N NVQEA R +G++I+
Sbjct: 432 TEAERFSELSDGKVPVGVGENTIIRNCIIDKNARIGKNVMIMNSQNVQEAERPLEGFYIR 491
Query: 462 SGIVTVIKDALLPSGTVI 479
SGI V+K+A++P GTVI
Sbjct: 492 SGITVVLKNAVIPDGTVI 509
>Os01g0633100 Similar to ADP-glucose pyrophosphorylase subunit SH2
Length = 518
Score = 436 bits (1120), Expect = e-122, Method: Compositional matrix adjust.
Identities = 209/438 (47%), Positives = 297/438 (67%), Gaps = 12/438 (2%)
Query: 49 VLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSAS 108
V +ILGGG G +L+PLT RA PAVP+G YRLIDIP+SNC NS I+KI+V+TQFNSAS
Sbjct: 86 VSAVILGGGTGVQLFPLTSTRATPAVPVGGCYRLIDIPMSNCFNSGINKIFVMTQFNSAS 145
Query: 109 LNRHLSRAYGNNIGGYKN--EGFVEVLAAQQSPDNP-NWFQGTADAVRQYLWLFEEH--- 162
LNRH+ Y +GG N +G V+VLAA Q PD P WFQGTADA+R+++W+ E+H
Sbjct: 146 LNRHIHHTY---LGGGINFTDGSVQVLAATQMPDEPAGWFQGTADAIRKFMWILEDHYNQ 202
Query: 163 -NVMEFLILAGDHLYRMDYEKFIQAHRETDSDITVAALPMDEKRATAFGLMKIDEEGRIV 221
N+ +IL GD LYRM+Y + +Q H + ++DIT++ P+D RA+ +GL+K D+ GR++
Sbjct: 203 NNIEHVVILCGDQLYRMNYMELVQKHVDDNADITISCAPIDGSRASDYGLVKFDDSGRVI 262
Query: 222 EFAEKPKGEQLKAMMVDTTILGLDDVRAKEMPYIASMGIYVISKNVMLQLLREQFPGAND 281
+F EKP+G L++M VDT+ L ++ PYIASMGIYV+ K+V+L +L+ ++ D
Sbjct: 263 QFLEKPEGADLESMKVDTSFLSYAIDDKQKYPYIASMGIYVLKKDVLLDILKSKYAHLQD 322
Query: 282 FGSEVIPGATNIGMRVQAYLYDGYWEDIGTIEAFYNANLGITKKPVPDFSFYDRSAPIYT 341
FGSE++P A + V+A ++ YWEDIGTI++F++ANL +T++P P F FYD P +T
Sbjct: 323 FGSEILPRAV-LEHNVKACVFTEYWEDIGTIKSFFDANLALTEQP-PKFEFYDPKTPFFT 380
Query: 342 QPRHLPPSKVLDADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDSLLMGADYYE 401
PR+LPP+++ + D++I +GC C I HSV+G+ S +S G ++D+++MGAD YE
Sbjct: 381 SPRYLPPARLEKCKIKDAIISDGCSFSECTIEHSVIGISSRVSIGCELKDTMMMGADQYE 440
Query: 402 TEADXXXXXXXXXXXXXXXXNCHIRRAIIDKNARIGDNVKIINVDNVQEAARETDGYFIK 461
TE + N IR IID NARIG NV I N VQE+ +GY+I+
Sbjct: 441 TEEETSKLLFEGKVPIGIGENTKIRNCIIDMNARIGRNVIIANTQGVQESDHPEEGYYIR 500
Query: 462 SGIVTVIKDALLPSGTVI 479
SGIV ++K+A + GTVI
Sbjct: 501 SGIVVILKNATIKDGTVI 518
>Os05g0580000 Similar to ADP-glucose pyrophosphorylase (EC 2.7.7.27) (Fragment)
Length = 519
Score = 433 bits (1114), Expect = e-121, Method: Compositional matrix adjust.
Identities = 210/438 (47%), Positives = 297/438 (67%), Gaps = 12/438 (2%)
Query: 49 VLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSAS 108
V +ILGGG GT+L+PLT RA PAVP+G YRLIDIP+SNC NS I+KI+++TQFNSAS
Sbjct: 87 VAAVILGGGTGTQLFPLTSTRATPAVPIGGCYRLIDIPMSNCFNSGINKIFIMTQFNSAS 146
Query: 109 LNRHLSRAYGNNIGGYKN--EGFVEVLAAQQSP-DNPNWFQGTADAVRQYLWLFEE---H 162
LNRH+ R Y +GG N +G VEVLAA Q P + WFQGTADAVR+++W+ E+ H
Sbjct: 147 LNRHIHRTY---LGGGINFTDGSVEVLAATQMPGEAAGWFQGTADAVRKFIWVLEDYYKH 203
Query: 163 NVME-FLILAGDHLYRMDYEKFIQAHRETDSDITVAALPMDEKRATAFGLMKIDEEGRIV 221
+E LIL+GD LYRMDY + +Q H + ++DIT++ P+ E RA+ +GL+K D GR++
Sbjct: 204 KAIEHILILSGDQLYRMDYMELVQKHVDDNADITLSCAPVGESRASDYGLVKFDSSGRVI 263
Query: 222 EFAEKPKGEQLKAMMVDTTILGLDDVRAKEMPYIASMGIYVISKNVMLQLLREQFPGAND 281
+F+EKPKG L+AM VDT+ L + PYIASMG+YV ++V+L LL+ ++ +D
Sbjct: 264 QFSEKPKGTDLEAMKVDTSFLNFAIDDPTKFPYIASMGVYVFKRDVLLNLLKSRYAELHD 323
Query: 282 FGSEVIPGATNIGMRVQAYLYDGYWEDIGTIEAFYNANLGITKKPVPDFSFYDRSAPIYT 341
FGSE++P A + VQAY++ YWEDIGTI +F++AN+ + ++P P F FYD P +T
Sbjct: 324 FGSEILPRALH-EHNVQAYVFADYWEDIGTIRSFFDANMALCEQP-PKFEFYDPKTPFFT 381
Query: 342 QPRHLPPSKVLDADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDSLLMGADYYE 401
PR+LPP+K + D++I GC ++ C I HS+VG+RS ++ ++++++MGAD YE
Sbjct: 382 SPRYLPPTKSDKCRIKDAIISHGCFLRECTIEHSIVGVRSRLNSACELKNTMMMGADLYE 441
Query: 402 TEADXXXXXXXXXXXXXXXXNCHIRRAIIDKNARIGDNVKIINVDNVQEAARETDGYFIK 461
TE + N I IID NAR+G NV I N + VQE+ R +GY+I+
Sbjct: 442 TEDEISRLLSEGKVPIGVGENTKINNCIIDMNARVGRNVVITNSEGVQESDRPEEGYYIR 501
Query: 462 SGIVTVIKDALLPSGTVI 479
SGIV ++K+A + G VI
Sbjct: 502 SGIVVILKNATIKDGKVI 519
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.318 0.135 0.390
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 15,019,033
Number of extensions: 619455
Number of successful extensions: 1351
Number of sequences better than 1.0e-10: 6
Number of HSP's gapped: 1325
Number of HSP's successfully gapped: 6
Length of query: 479
Length of database: 17,035,801
Length adjustment: 105
Effective length of query: 374
Effective length of database: 11,553,331
Effective search space: 4320945794
Effective search space used: 4320945794
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 158 (65.5 bits)