Os01g0633100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to ADP-glucose pyrophosphorylase subunit SH2.
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Os01g0633100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to ADP-glucose pyrophosphorylase subunit SH2.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 82.92 | 0.428 | 9.67 | -1.54 | 0.684 | -1.55 | 0.917 | -0.36 | 0.0448 | 6.07 | 26.9 | 35 | -- | -- |
| 82.92 | 0.424 | 9.68 | -1.59 | 0.698 | -1.53 | 0.864 | -- | 0.0362 | 6.2 | 27.1 | 56 | -- | -- |
| 84.75 | 0.429 | 9.68 | -1.58 | 0.701 | -1.55 | -- | -0.105 | 0.0291 | 6.14 | 27 | 48 | -- | -- |
| 84.73 | 0.429 | 9.68 | -1.59 | 0.706 | -1.54 | -- | -- | 0.0285 | 6.14 | 27.04 | 56 | -- | -- |
| 102.27 | 0.474 | 9.66 | -1.46 | -- | -1.51 | -- | -0.585 | 0.15 | -- | 24.21 | 36 | -- | -- |
| 117.13 | 0.507 | 9.6 | -1.23 | 0.589 | -- | 0.635 | -- | 0.369 | 8.52 | -- | -- | -- | -- |
| 118.41 | 0.51 | 9.6 | -1.21 | 0.586 | -- | -- | -- | 0.37 | 8.62 | -- | -- | -- | -- |
| 102.8 | 0.474 | 9.67 | -1.54 | -- | -1.46 | -- | -- | 0.131 | -- | 24.28 | 33 | -- | -- |
| 144.09 | 0.562 | 9.61 | -- | 0.576 | -0.897 | -- | -- | 0.33 | 7.14 | 26.7 | 41 | -- | -- |
| 137.76 | 0.548 | 9.62 | -1.21 | -- | -- | -- | -- | 0.375 | -- | -- | -- | -- | -- |
| 157.22 | 0.587 | 9.57 | -- | 0.583 | -- | -- | -- | 0.505 | 8.77 | -- | -- | -- | -- |
| 160.15 | 0.591 | 9.62 | -- | -- | -0.932 | -- | -- | 0.354 | -- | 25 | 10 | -- | -- |
| 176.49 | 0.62 | 9.59 | -- | -- | -- | -- | -- | 0.509 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 84.00 | temperature | 25 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 3 | 84.31 | temperature | 25 | 30 | < th | dose dependent | rect. | 23 | 23 |
| 4 | 84.34 | temperature | 25 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 6 | 84.35 | temperature | 25 | 30 | < th | dose dependent | rect. | 11 | 23 |
| 7 | 84.37 | temperature | 25 | 30 | < th | dose dependent | no | NA | NA |
| 8 | 84.40 | temperature | 25 | 30 | < th | dose dependent | rect. | 21 | 23 |
| 9 | 84.41 | temperature | 25 | 30 | < th | dose dependent | rect. | 15 | 23 |
| 10 | 84.41 | temperature | 25 | 30 | < th | dose dependent | rect. | 17 | 23 |
| 13 | 84.45 | temperature | 25 | 30 | < th | dose dependent | rect. | 13 | 23 |
| 14 | 84.48 | temperature | 25 | 30 | < th | dose dependent | rect. | 7 | 23 |
| 15 | 84.48 | temperature | 25 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 17 | 84.49 | temperature | 25 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 19 | 84.52 | temperature | 25 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 254 | 88.44 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 261 | 88.50 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 5 |
| 289 | 88.81 | temperature | 25 | 720 | < th | dose dependent | rect. | 5 | 19 |
| 396 | 89.72 | temperature | 10 | 270 | > th | dose dependent | rect. | 16 | 23 |
| 399 | 89.74 | temperature | 25 | 1440 | < th | dose dependent | sin | 16 | NA |
| 469 | 90.07 | temperature | 25 | 1440 | < th | dose dependent | rect. | 11 | 18 |
| 471 | 90.08 | temperature | 25 | 1440 | < th | dose dependent | rect. | 11 | 16 |
| 474 | 90.09 | temperature | 25 | 1440 | < th | dose independent | rect. | 10 | 11 |
| 544 | 90.32 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 21 |
| 549 | 90.34 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 19 |
| 636 | 90.57 | temperature | 25 | 1440 | > th | dose independent | rect. | 10 | 10 |
| 647 | 90.59 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |
| 731 | 90.80 | temperature | 10 | 10 | > th | dose dependent | no | NA | NA |
| 747 | 90.84 | temperature | 25 | 1440 | < th | dose independent | rect. | 13 | 8 |
| 867 | 91.18 | temperature | 25 | 1440 | < th | dose independent | sin | 21 | NA |
| 895 | 91.24 | temperature | 10 | 1440 | > th | dose dependent | rect. | 21 | 1 |
| 956 | 91.37 | temperature | 25 | 1440 | > th | dose independent | rect. | 13 | 7 |
| 966 | 91.39 | temperature | 10 | 1440 | > th | dose dependent | rect. | 17 | 13 |
| 998 | 91.47 | temperature | 25 | 720 | < th | dose dependent | sin | 22 | NA |