BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0633100 Os01g0633100|AK071497
(518 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os01g0633100 Similar to ADP-glucose pyrophosphorylase subun... 1026 0.0
Os05g0580000 Similar to ADP-glucose pyrophosphorylase (EC 2... 783 0.0
Os07g0243200 Similar to ADP-glucose pyrophosphorylase large... 520 e-147
Os03g0735000 Similar to Glucose-1-phosphate adenylyltransfe... 515 e-146
Os09g0298200 Similar to Brittle 2 417 e-116
Os08g0345800 Similar to Glucose-1-phosphate adenylyltransfe... 407 e-114
>Os01g0633100 Similar to ADP-glucose pyrophosphorylase subunit SH2
Length = 518
Score = 1026 bits (2654), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 492/518 (94%), Positives = 492/518 (94%)
Query: 1 MQFMMPLDTNACAQPMRRAGEGAGTERLMERLNIGGMTQEKALRKRCFGDGVTGTARCVF 60
MQFMMPLDTNACAQPMRRAGEGAGTERLMERLNIGGMTQEKALRKRCFGDGVTGTARCVF
Sbjct: 1 MQFMMPLDTNACAQPMRRAGEGAGTERLMERLNIGGMTQEKALRKRCFGDGVTGTARCVF 60
Query: 61 TSDADRDTPHLRTQSSRKNYADASHVSAVILGGGTGVQLFPLTSTRATPAVPVGGCYRLI 120
TSDADRDTPHLRTQSSRKNYADASHVSAVILGGGTGVQLFPLTSTRATPAVPVGGCYRLI
Sbjct: 61 TSDADRDTPHLRTQSSRKNYADASHVSAVILGGGTGVQLFPLTSTRATPAVPVGGCYRLI 120
Query: 121 DIPMSNCFNSGINKIFVMTQFNSASLNRHIHHTYLGGGINFTDGSVQVLAATQMPDEPAG 180
DIPMSNCFNSGINKIFVMTQFNSASLNRHIHHTYLGGGINFTDGSVQVLAATQMPDEPAG
Sbjct: 121 DIPMSNCFNSGINKIFVMTQFNSASLNRHIHHTYLGGGINFTDGSVQVLAATQMPDEPAG 180
Query: 181 WFQGTADAIRKFMWILEDHYNQNNIEHVVILCGDQLYRMNYMELVQKHVDDNADITISCA 240
WFQGTADAIRKFMWILEDHYNQNNIEHVVILCGDQLYRMNYMELVQKHVDDNADITISCA
Sbjct: 181 WFQGTADAIRKFMWILEDHYNQNNIEHVVILCGDQLYRMNYMELVQKHVDDNADITISCA 240
Query: 241 PIDGSRASDYGLVKFDDSGRVIQFLEKPEGADLESMKVDTSFLSYAIDDKQKYPYIASMG 300
PIDGSRASDYGLVKFDDSGRVIQFLEKPEGADLESMKVDTSFLSYAIDDKQKYPYIASMG
Sbjct: 241 PIDGSRASDYGLVKFDDSGRVIQFLEKPEGADLESMKVDTSFLSYAIDDKQKYPYIASMG 300
Query: 301 IYXXXXXXXXXXXXXXYAHLQDFGSEILPRAVLEHNVKACVFTEYWEDIGTIKSFFDANL 360
IY YAHLQDFGSEILPRAVLEHNVKACVFTEYWEDIGTIKSFFDANL
Sbjct: 301 IYVLKKDVLLDILKSKYAHLQDFGSEILPRAVLEHNVKACVFTEYWEDIGTIKSFFDANL 360
Query: 361 ALTEQPPKFEFYDPKTPFFTSPRYLPPARLEKCKIKDAIISDGCSFSECTIEHXXXXXXX 420
ALTEQPPKFEFYDPKTPFFTSPRYLPPARLEKCKIKDAIISDGCSFSECTIEH
Sbjct: 361 ALTEQPPKFEFYDPKTPFFTSPRYLPPARLEKCKIKDAIISDGCSFSECTIEHSVIGISS 420
Query: 421 XXXXXCELKDTMMMGADQYETEEETSKLLFEGKVPIGIGENTKIRNCIIDMNARIGRNVI 480
CELKDTMMMGADQYETEEETSKLLFEGKVPIGIGENTKIRNCIIDMNARIGRNVI
Sbjct: 421 RVSIGCELKDTMMMGADQYETEEETSKLLFEGKVPIGIGENTKIRNCIIDMNARIGRNVI 480
Query: 481 IANTQGVQESDHPEEGYYIRSGIVVILKNATIKDGTVI 518
IANTQGVQESDHPEEGYYIRSGIVVILKNATIKDGTVI
Sbjct: 481 IANTQGVQESDHPEEGYYIRSGIVVILKNATIKDGTVI 518
>Os05g0580000 Similar to ADP-glucose pyrophosphorylase (EC 2.7.7.27) (Fragment)
Length = 519
Score = 783 bits (2021), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 376/524 (71%), Positives = 427/524 (81%), Gaps = 11/524 (2%)
Query: 1 MQF--MMPLDTNACAQPMRRAGEGAGTERLMERLNIG---GMTQEKALRKRCFG-DGVTG 54
MQF + PL+ AC P+RR GEG+ ++RL IG + ++A+R+ C G G
Sbjct: 1 MQFSSVFPLEGKACVSPIRRGGEGSASDRL----KIGDSSSIKHDRAVRRMCLGYRGTKN 56
Query: 55 TARCVFTSDADRDTPHLRTQSSRKNYADASHVSAVILGGGTGVQLFPLTSTRATPAVPVG 114
A+CV TSDA DT H+RT S R+N+AD + V+AVILGGGTG QLFPLTSTRATPAVP+G
Sbjct: 57 GAQCVLTSDAGPDTLHVRT-SFRRNFADPNEVAAVILGGGTGTQLFPLTSTRATPAVPIG 115
Query: 115 GCYRLIDIPMSNCFNSGINKIFVMTQFNSASLNRHIHHTYLGGGINFTDGSVQVLAATQM 174
GCYRLIDIPMSNCFNSGINKIF+MTQFNSASLNRHIH TYLGGGINFTDGSV+VLAATQM
Sbjct: 116 GCYRLIDIPMSNCFNSGINKIFIMTQFNSASLNRHIHRTYLGGGINFTDGSVEVLAATQM 175
Query: 175 PDEPAGWFQGTADAIRKFMWILEDHYNQNNIEHVVILCGDQLYRMNYMELVQKHVDDNAD 234
P E AGWFQGTADA+RKF+W+LED+Y IEH++IL GDQLYRM+YMELVQKHVDDNAD
Sbjct: 176 PGEAAGWFQGTADAVRKFIWVLEDYYKHKAIEHILILSGDQLYRMDYMELVQKHVDDNAD 235
Query: 235 ITISCAPIDGSRASDYGLVKFDDSGRVIQFLEKPEGADLESMKVDTSFLSYAIDDKQKYP 294
IT+SCAP+ SRASDYGLVKFD SGRVIQF EKP+G DLE+MKVDTSFL++AIDD K+P
Sbjct: 236 ITLSCAPVGESRASDYGLVKFDSSGRVIQFSEKPKGTDLEAMKVDTSFLNFAIDDPTKFP 295
Query: 295 YIASMGIYXXXXXXXXXXXXXXYAHLQDFGSEILPRAVLEHNVKACVFTEYWEDIGTIKS 354
YIASMG+Y YA L DFGSEILPRA+ EHNV+A VF +YWEDIGTI+S
Sbjct: 296 YIASMGVYVFKRDVLLNLLKSRYAELHDFGSEILPRALHEHNVQAYVFADYWEDIGTIRS 355
Query: 355 FFDANLALTEQPPKFEFYDPKTPFFTSPRYLPPARLEKCKIKDAIISDGCSFSECTIEHX 414
FFDAN+AL EQPPKFEFYDPKTPFFTSPRYLPP + +KC+IKDAIIS GC ECTIEH
Sbjct: 356 FFDANMALCEQPPKFEFYDPKTPFFTSPRYLPPTKSDKCRIKDAIISHGCFLRECTIEHS 415
Query: 415 XXXXXXXXXXXCELKDTMMMGADQYETEEETSKLLFEGKVPIGIGENTKIRNCIIDMNAR 474
CELK+TMMMGAD YETE+E S+LL EGKVPIG+GENTKI NCIIDMNAR
Sbjct: 416 IVGVRSRLNSACELKNTMMMGADLYETEDEISRLLSEGKVPIGVGENTKINNCIIDMNAR 475
Query: 475 IGRNVIIANTQGVQESDHPEEGYYIRSGIVVILKNATIKDGTVI 518
+GRNV+I N++GVQESD PEEGYYIRSGIVVILKNATIKDG VI
Sbjct: 476 VGRNVVITNSEGVQESDRPEEGYYIRSGIVVILKNATIKDGKVI 519
>Os07g0243200 Similar to ADP-glucose pyrophosphorylase large subunit 2 (EC
2.7.7.27) (Fragment)
Length = 509
Score = 520 bits (1339), Expect = e-147, Method: Compositional matrix adjust.
Identities = 250/435 (57%), Positives = 313/435 (71%), Gaps = 3/435 (0%)
Query: 86 VSAVILGGGTGVQLFPLTSTRATPAVPVGGCYRLIDIPMSNCFNSGINKIFVMTQFNSAS 145
V+++ILGGG G +LFPLT TRA PAVPVGGCYRLIDIPMSNC NS INKI+V+TQFNS S
Sbjct: 76 VASIILGGGAGTRLFPLTRTRAKPAVPVGGCYRLIDIPMSNCINSKINKIYVLTQFNSQS 135
Query: 146 LNRHIHHTY-LGGGINFTDGSVQVLAATQMPDEPAG-WFQGTADAIRKFMWILEDHYNQN 203
LNRHI TY +G G+ F DG V+VLAATQ E WFQGTADA+R+F+W+ ED
Sbjct: 136 LNRHIARTYNIGEGVGFGDGFVEVLAATQTTGESGKRWFQGTADAVRQFLWLFEDA-RLK 194
Query: 204 NIEHVVILCGDQLYRMNYMELVQKHVDDNADITISCAPIDGSRASDYGLVKFDDSGRVIQ 263
IE+++IL GD LYRM+YM+ VQKHVD ADI+++C P+D SRASD+GL+K D +GR+
Sbjct: 195 RIENILILSGDHLYRMDYMDFVQKHVDKGADISVACVPVDESRASDFGLMKTDKNGRITD 254
Query: 264 FLEKPEGADLESMKVDTSFLSYAIDDKQKYPYIASMGIYXXXXXXXXXXXXXXYAHLQDF 323
FLEKP+ L+SM++D + Y+ASMGIY Y DF
Sbjct: 255 FLEKPKDESLKSMQLDMGTFGLRPEVADTCKYMASMGIYVFRTDILLRLLRGHYPTANDF 314
Query: 324 GSEILPRAVLEHNVKACVFTEYWEDIGTIKSFFDANLALTEQPPKFEFYDPKTPFFTSPR 383
GSE++P A ++NV+A +F YWEDIGTIKSFF+ANLALT+Q P F FYDP P FTSPR
Sbjct: 315 GSEVIPMAAKDYNVQAYLFDGYWEDIGTIKSFFEANLALTDQSPNFYFYDPVKPIFTSPR 374
Query: 384 YLPPARLEKCKIKDAIISDGCSFSECTIEHXXXXXXXXXXXXCELKDTMMMGADQYETEE 443
+LPP ++E CK+ ++I+S GC +EC+++ +LKDTMMMGAD Y+TE
Sbjct: 375 FLPPTKVENCKVLNSIVSHGCFLTECSVDRSVIGVRSRLEPGVQLKDTMMMGADYYQTEA 434
Query: 444 ETSKLLFEGKVPIGIGENTKIRNCIIDMNARIGRNVIIANTQGVQESDHPEEGYYIRSGI 503
E L +GKVP+G+GENT IRNCIID NARIG+NV+I N+Q VQE++ P EG+YIRSGI
Sbjct: 435 ERFSELSDGKVPVGVGENTIIRNCIIDKNARIGKNVMIMNSQNVQEAERPLEGFYIRSGI 494
Query: 504 VVILKNATIKDGTVI 518
V+LKNA I DGTVI
Sbjct: 495 TVVLKNAVIPDGTVI 509
>Os03g0735000 Similar to Glucose-1-phosphate adenylyltransferase large subunit 2
(EC 2.7.7.27) (ADP-glucose synthase) (ADP-glucose
pyrophosphorylase) (AGPASE S)
(Alpha-D-glucose-1-phosphate adenyl transferase) (BLPL)
(Fragment)
Length = 511
Score = 515 bits (1326), Expect = e-146, Method: Compositional matrix adjust.
Identities = 252/439 (57%), Positives = 311/439 (70%), Gaps = 3/439 (0%)
Query: 82 DASHVSAVILGGGTGVQLFPLTSTRATPAVPVGGCYRLIDIPMSNCFNSGINKIFVMTQF 141
D+ V AVILGGG G +LFPLT RA PAVP+GG YRLID+PMSNC NSGINK++++TQF
Sbjct: 74 DSKTVVAVILGGGAGTRLFPLTKRRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQF 133
Query: 142 NSASLNRHIHHTY-LGGGINFTDGSVQVLAATQMP-DEPAGWFQGTADAIRKFMWILEDH 199
NSASLNRH+ Y G+ F DG V+VLAATQ P E WFQGTADA+R+F W+ +
Sbjct: 134 NSASLNRHLSRAYNFSNGVAFGDGFVEVLAATQTPGSEGKRWFQGTADAVRQFDWLFD-D 192
Query: 200 YNQNNIEHVVILCGDQLYRMNYMELVQKHVDDNADITISCAPIDGSRASDYGLVKFDDSG 259
+I+ V+IL GD LYRM+YM+ VQ H ADI+I C PID SRASD+GL+K DD+G
Sbjct: 193 AKAKDIDDVLILSGDHLYRMDYMDFVQSHRQRGADISICCLPIDDSRASDFGLMKIDDTG 252
Query: 260 RVIQFLEKPEGADLESMKVDTSFLSYAIDDKQKYPYIASMGIYXXXXXXXXXXXXXXYAH 319
RVI F EKP+G DL++M+VDT+ L D+ ++ PYIASMG+Y +
Sbjct: 253 RVIAFSEKPKGDDLKAMQVDTTVLGLPQDEAKEKPYIASMGVYIFKKEILLNLLRWRFPT 312
Query: 320 LQDFGSEILPRAVLEHNVKACVFTEYWEDIGTIKSFFDANLALTEQPPKFEFYDPKTPFF 379
DFGSEI+P + E NVKA +F +YWEDIGTIKSFF+ANL+L EQPP+F FYD P +
Sbjct: 313 ANDFGSEIIPASAKEINVKAYLFNDYWEDIGTIKSFFEANLSLAEQPPRFSFYDANKPMY 372
Query: 380 TSPRYLPPARLEKCKIKDAIISDGCSFSECTIEHXXXXXXXXXXXXCELKDTMMMGADQY 439
TS R LPP+ + KI D+IIS GC C IEH LKDT+M+GAD Y
Sbjct: 373 TSRRNLPPSMINNSKITDSIISHGCFLDSCRIEHSVVGIRSRIGSNVHLKDTVMLGADFY 432
Query: 440 ETEEETSKLLFEGKVPIGIGENTKIRNCIIDMNARIGRNVIIANTQGVQESDHPEEGYYI 499
ET+ E +LL EGKVPIGIGENTKI+NCIID NARIG+NV I+N++GVQE+D EG+YI
Sbjct: 433 ETDLERGELLAEGKVPIGIGENTKIQNCIIDKNARIGKNVTISNSEGVQEADRTSEGFYI 492
Query: 500 RSGIVVILKNATIKDGTVI 518
RSGI ++LKN+ I DG VI
Sbjct: 493 RSGITIVLKNSIIADGLVI 511
>Os09g0298200 Similar to Brittle 2
Length = 500
Score = 417 bits (1072), Expect = e-116, Method: Compositional matrix adjust.
Identities = 202/426 (47%), Positives = 279/426 (65%), Gaps = 12/426 (2%)
Query: 98 QLFPLTSTRATPAVPVGGCYRLIDIPMSNCFNSGINKIFVMTQFNSASLNRHIHHTY--- 154
+L+PLT RA PAVP+G YRLIDIP+SNC NS ++KI+V+TQFNSASLNRH+ Y
Sbjct: 82 RLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNVSKIYVLTQFNSASLNRHLSRAYGNN 141
Query: 155 LGGGINFTDGSVQVLAATQMPDEPAGWFQGTADAIRKFMWILEDHYNQNNIEHVVILCGD 214
+GG N +G V+VLAA Q P+ P WFQGTADA+R+++W+ E+H N+ +IL GD
Sbjct: 142 IGGYKN--EGFVEVLAAQQSPENP-NWFQGTADAVRQYLWLFEEH----NVMEFLILAGD 194
Query: 215 QLYRMNYMELVQKHVDDNADITISCAPIDGSRASDYGLVKFDDSGRVIQFLEKPEGADLE 274
LYRM+Y + +Q H + NADIT++ P+D RA+ +GL+K DD GR+I+F EKP+G L+
Sbjct: 195 HLYRMDYQKFIQAHRETNADITVAALPMDEERATAFGLMKIDDEGRIIEFAEKPKGEKLK 254
Query: 275 SMKVDTSFLSYAIDDKQKYPYIASMGIYXXXXXXXXXXXXXXYAHLQDFGSEILPRAV-L 333
SM VDT+ L + ++ PYIASMGIY + DFGSE++P A +
Sbjct: 255 SMMVDTTILGLDTERAKELPYIASMGIYVFSKDVMLKLLRQNFPAANDFGSEVIPGATEI 314
Query: 334 EHNVKACVFTEYWEDIGTIKSFFDANLALTEQP-PKFEFYDPKTPFFTSPRYLPPARLEK 392
V+A ++ YWEDIGTI++F++ANL +T++P P F FYD +T PRYLPP+++
Sbjct: 315 GMRVQAYLYDGYWEDIGTIEAFYNANLGITKKPVPDFSFYDRSAAIYTQPRYLPPSKVLD 374
Query: 393 CKIKDAIISDGCSFSECTIEHXXXXXXXXXXXXCELKDTMMMGADQYETEEETSKLLFEG 452
+ D++I +GC CTI H ++D+++MGAD YETE + L G
Sbjct: 375 ADVTDSVIGEGCVIRHCTINHSVVGLRSCISEGAVIEDSLLMGADYYETETDKKALSETG 434
Query: 453 KVPIGIGENTKIRNCIIDMNARIGRNVIIANTQGVQESDHPEEGYYIRSGIVVILKNATI 512
+PIGIG+N IR IID NARIG NV I N +QE+ +GY+I+SGIV ++K+A I
Sbjct: 435 GIPIGIGKNAHIRKAIIDKNARIGENVKIINVDNIQEASRETDGYFIKSGIVTVIKDALI 494
Query: 513 KDGTVI 518
GTVI
Sbjct: 495 PSGTVI 500
>Os08g0345800 Similar to Glucose-1-phosphate adenylyltransferase small subunit,
chloroplast precursor (EC 2.7.7.27) (ADP-glucose
synthase) (ADP-glucose pyrophosphorylase) (AGPASE B)
(Alpha-D-glucose-1-phosphate adenyl transferase)
Length = 479
Score = 407 bits (1046), Expect = e-114, Method: Compositional matrix adjust.
Identities = 198/426 (46%), Positives = 279/426 (65%), Gaps = 12/426 (2%)
Query: 98 QLFPLTSTRATPAVPVGGCYRLIDIPMSNCFNSGINKIFVMTQFNSASLNRHIHHTY--- 154
+L+PLT RA PAVP+G YRLIDIP+SNC NS I+KI+V+TQFNSASLNRH+ Y
Sbjct: 61 RLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYGNN 120
Query: 155 LGGGINFTDGSVQVLAATQMPDEPAGWFQGTADAIRKFMWILEDHYNQNNIEHVVILCGD 214
+GG N +G V+VLAA Q PD P WFQGTADA+R+++W+ E+H N+ +IL GD
Sbjct: 121 IGGYKN--EGFVEVLAAQQSPDNP-NWFQGTADAVRQYLWLFEEH----NVMEFLILAGD 173
Query: 215 QLYRMNYMELVQKHVDDNADITISCAPIDGSRASDYGLVKFDDSGRVIQFLEKPEGADLE 274
LYRM+Y + +Q H + ++DIT++ P+D RA+ +GL+K D+ GR+++F EKP+G L+
Sbjct: 174 HLYRMDYEKFIQAHRETDSDITVAALPMDEKRATAFGLMKIDEEGRIVEFAEKPKGEQLK 233
Query: 275 SMKVDTSFLSYAIDDKQKYPYIASMGIYXXXXXXXXXXXXXXYAHLQDFGSEILPRAV-L 333
+M VDT+ L ++ PYIASMGIY + DFGSE++P A +
Sbjct: 234 AMMVDTTILGLDDVRAKEMPYIASMGIYVISKNVMLQLLREQFPGANDFGSEVIPGATNI 293
Query: 334 EHNVKACVFTEYWEDIGTIKSFFDANLALTEQP-PKFEFYDPKTPFFTSPRYLPPARLEK 392
V+A ++ YWEDIGTI++F++ANL +T++P P F FYD P +T PR+LPP+++
Sbjct: 294 GMRVQAYLYDGYWEDIGTIEAFYNANLGITKKPVPDFSFYDRSAPIYTQPRHLPPSKVLD 353
Query: 393 CKIKDAIISDGCSFSECTIEHXXXXXXXXXXXXCELKDTMMMGADQYETEEETSKLLFEG 452
+ D++I +GC C I H ++D+++MGAD YETE + L +G
Sbjct: 354 ADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDSLLMGADYYETEADKKLLGEKG 413
Query: 453 KVPIGIGENTKIRNCIIDMNARIGRNVIIANTQGVQESDHPEEGYYIRSGIVVILKNATI 512
+PIGIG+N IR IID NARIG NV I N VQE+ +GY+I+SGIV ++K+A +
Sbjct: 414 GIPIGIGKNCHIRRAIIDKNARIGDNVKIINVDNVQEAARETDGYFIKSGIVTVIKDALL 473
Query: 513 KDGTVI 518
GTVI
Sbjct: 474 PSGTVI 479
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.320 0.137 0.413
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 17,581,341
Number of extensions: 750242
Number of successful extensions: 1612
Number of sequences better than 1.0e-10: 6
Number of HSP's gapped: 1593
Number of HSP's successfully gapped: 6
Length of query: 518
Length of database: 17,035,801
Length adjustment: 105
Effective length of query: 413
Effective length of database: 11,553,331
Effective search space: 4771525703
Effective search space used: 4771525703
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 158 (65.5 bits)