BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os08g0292000 Os08g0292000|AK100441
(786 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os08g0292000 Homeobox domain containing protein 1523 0.0
Os04g0569100 Similar to OCL1 homeobox protein 298 9e-81
Os02g0674800 Similar to OCL1 homeobox protein 273 5e-73
Os04g0627000 Similar to Roc1 267 2e-71
Os10g0575600 Homeodomain-related containing protein 203 4e-52
Os09g0526200 Similar to OCL3 protein 124 2e-28
Os01g0788800 Homeodomain-like containing protein 113 5e-25
>Os08g0292000 Homeobox domain containing protein
Length = 786
Score = 1523 bits (3942), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 734/786 (93%), Positives = 734/786 (93%)
Query: 1 MNGELKLMASYVSKLKFILQKDQQQEPHTANLLVLLGSSNQDKRNGLSQGENRMDTCTRK 60
MNGELKLMASYVSKLKFILQKDQQQEPHTANLLVLLGSSNQDKRNGLSQGENRMDTCTRK
Sbjct: 1 MNGELKLMASYVSKLKFILQKDQQQEPHTANLLVLLGSSNQDKRNGLSQGENRMDTCTRK 60
Query: 61 KPRRYQLLTMQQKETLNRAFQSCPNPDRNDLKKLAKELNMTETQIKYWFQNCRTKMKKFX 120
KPRRYQLLTMQQKETLNRAFQSCPNPDRNDLKKLAKELNMTETQIKYWFQNCRTKMKKF
Sbjct: 61 KPRRYQLLTMQQKETLNRAFQSCPNPDRNDLKKLAKELNMTETQIKYWFQNCRTKMKKFK 120
Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXRMKNSTCRACDLPLFHIDCRHWENPMLNKGNHGVTS 180
RMKNSTCRACDLPLFHIDCRHWENPMLNKGNHGVTS
Sbjct: 121 NNEERKLLQKENEELKKENAELRNRMKNSTCRACDLPLFHIDCRHWENPMLNKGNHGVTS 180
Query: 181 NLIPQAVSSLLPSSSGFVASGSNLSSNAVLMPVSAMPSSVLQPAPAVSGANFPILHNLSA 240
NLIPQAVSSLLPSSSGFVASGSNLSSNAVLMPVSAMPSSVLQPAPAVSGANFPILHNLSA
Sbjct: 181 NLIPQAVSSLLPSSSGFVASGSNLSSNAVLMPVSAMPSSVLQPAPAVSGANFPILHNLSA 240
Query: 241 NANDGYTEKNVLLDLANRAMEEFFSLMKENESLLVKKKENGPLWLPHMDILGVESLNYQE 300
NANDGYTEKNVLLDLANRAMEEFFSLMKENESLLVKKKENGPLWLPHMDILGVESLNYQE
Sbjct: 241 NANDGYTEKNVLLDLANRAMEEFFSLMKENESLLVKKKENGPLWLPHMDILGVESLNYQE 300
Query: 301 YLAKSRTIGQKPVDFKVVVTRDTAIVNGSCVDLVKSLLDANRWRELFPGIVASANTTKII 360
YLAKSRTIGQKPVDFKVVVTRDTAIVNGSCVDLVKSLLDANRWRELFPGIVASANTTKII
Sbjct: 301 YLAKSRTIGQKPVDFKVVVTRDTAIVNGSCVDLVKSLLDANRWRELFPGIVASANTTKII 360
Query: 361 STGPSNLHDGLLQLMRAELQVMSPEVPVCDVTFLRQSVQFGSGLWCVVDVSIDTILPGEX 420
STGPSNLHDGLLQLMRAELQVMSPEVPVCDVTFLRQSVQFGSGLWCVVDVSIDTILPGE
Sbjct: 361 STGPSNLHDGLLQLMRAELQVMSPEVPVCDVTFLRQSVQFGSGLWCVVDVSIDTILPGES 420
Query: 421 XXXXXXXXXXXXXXRRMEVRLLPSGCVIEEMENGYSKVTWMVHAAYDERAVPVLYHSLLR 480
RRMEVRLLPSGCVIEEMENGYSKVTWMVHAAYDERAVPVLYHSLLR
Sbjct: 421 KTAQSSVQTSSTAARRMEVRLLPSGCVIEEMENGYSKVTWMVHAAYDERAVPVLYHSLLR 480
Query: 481 SAKALGACRWVASLQRHSQFLSGLHKYIFCPDSTMTEVVMRRKVLYLVKQMTSSFTGLFA 540
SAKALGACRWVASLQRHSQFLSGLHKYIFCPDSTMTEVVMRRKVLYLVKQMTSSFTGLFA
Sbjct: 481 SAKALGACRWVASLQRHSQFLSGLHKYIFCPDSTMTEVVMRRKVLYLVKQMTSSFTGLFA 540
Query: 541 SMSKATLQDGDDTHFAHQIVGGATGEPAGLLLSATTTIWLPGVNPRHVYDHLRDEQCHGE 600
SMSKATLQDGDDTHFAHQIVGGATGEPAGLLLSATTTIWLPGVNPRHVYDHLRDEQCHGE
Sbjct: 541 SMSKATLQDGDDTHFAHQIVGGATGEPAGLLLSATTTIWLPGVNPRHVYDHLRDEQCHGE 600
Query: 601 WRCLLGEQLHQGNALPYGAPLNGETVPEFYRMVNGLHEGHAISLISPREMGGNISNTLLL 660
WRCLLGEQLHQGNALPYGAPLNGETVPEFYRMVNGLHEGHAISLISPREMGGNISNTLLL
Sbjct: 601 WRCLLGEQLHQGNALPYGAPLNGETVPEFYRMVNGLHEGHAISLISPREMGGNISNTLLL 660
Query: 661 QEARTDLSGSLIVYARTDVNTVHSIMNSGLNPATVFLVSSGCAILPDCLESFPLHPAATA 720
QEARTDLSGSLIVYARTDVNTVHSIMNSGLNPATVFLVSSGCAILPDCLESFPLHPAATA
Sbjct: 661 QEARTDLSGSLIVYARTDVNTVHSIMNSGLNPATVFLVSSGCAILPDCLESFPLHPAATA 720
Query: 721 DQAGTSSAAIASRSETGGSFVTVTYQMFFXXXXXXXXXXXXIHQGRDALKKATDIFKVVL 780
DQAGTSSAAIASRSETGGSFVTVTYQMFF IHQGRDALKKATDIFKVVL
Sbjct: 721 DQAGTSSAAIASRSETGGSFVTVTYQMFFSSQGGAAPASSSIHQGRDALKKATDIFKVVL 780
Query: 781 DTLTVA 786
DTLTVA
Sbjct: 781 DTLTVA 786
>Os04g0569100 Similar to OCL1 homeobox protein
Length = 806
Score = 298 bits (763), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 226/726 (31%), Positives = 344/726 (47%), Gaps = 95/726 (13%)
Query: 60 KKPRRYQLLTMQQKETLNRAFQSCPNPDRNDLKKLAKELNMTETQIKYWFQNCRTKMKKF 119
K+ +RY T QQ + L F+ CP+PD +L+K L + Q+K+WFQN RT+MK
Sbjct: 103 KRKKRYHRHTPQQIQELEAMFKECPHPDEKQRAELSKRLGLEPRQVKFWFQNRRTQMKMQ 162
Query: 120 XXXXXXXXXXXXXXXXXXXXXXXXXRMKNSTCRACDLPLF----HIDCRHW--ENPMLNK 173
N+ C C P ++ H EN L
Sbjct: 163 LERHENSLLKQENDKLRSENLSIREATSNAVCVGCGGPAMLGEVSLEEHHLRVENARLKD 222
Query: 174 GNHGV---TSNLIPQAVSSL----------LPSSSGFVASGSNLSSNAVLMPVSAMPSSV 220
V + + +++S + +P SS +A G S + MP+S +
Sbjct: 223 ELSRVCALAAKFLGKSISVMAPPQMHQPHPVPGSSLELAVGGIGSMPSATMPISTITDFA 282
Query: 221 LQPAPAVSGANFPILHNLSANANDGYTEKNVLLDLANRAMEEFFSLMKENESLLVKKKEN 280
+ ++ P+ +A G +K++ L+LA AM+E LVK +
Sbjct: 283 GAMSSSMGTVITPMKSEAEPSAMAGI-DKSLFLELAMSAMDE-----------LVKMAQM 330
Query: 281 G-PLWLPHMDIL---GVESLNYQEYLAK-SRTIGQKPVDFKVVVTRDTAIV---NGSCVD 332
G PLW+P + ESLN++EYL IG KP + +R++ IV +G+
Sbjct: 331 GDPLWIPGASVPSSPAKESLNFEEYLNTFPPCIGVKPEGYVSEASRESGIVIIDDGAA-- 388
Query: 333 LVKSLLDANRWRELFPGIVASANTTKIISTGPSNLHDGLLQLMRAELQVMSPEVPVCDVT 392
LV++L+D RW ++F ++A A+TT+ ISTG + +G L LM+AELQV+SP VP+ +V
Sbjct: 389 LVETLMDERRWSDMFSCMIAKASTTEEISTGVAGSRNGALLLMQAELQVLSPLVPIREVK 448
Query: 393 FLRQSVQFGSGLWCVVDVSIDTILPGEXXXXXXXXXXXXXXXRRMEVRLLPSGCVIEEME 452
FLR S Q G+W VVDVS D ++ + M R LPSGCV+++
Sbjct: 449 FLRFSKQLADGVWAVVDVSADELMRDQGITSASSTA-------NMNCRRLPSGCVLQDTP 501
Query: 453 NGYSKVTWMVHAAYDERAVPVLYHSLLRSAKALGACRWVASLQRHSQFLSGLHKYIFCP- 511
NG+ KVTW+ H YDE +V LY LLRS ALGA RW+A+LQR + L+ L I P
Sbjct: 502 NGFVKVTWVEHTEYDEASVHPLYRPLLRSGLALGAGRWIATLQRQCECLALLMSSIALPE 561
Query: 512 -DSTMTEVVMRRKVLYLVKQMTSSF-TGLFASMSKA-------TLQDGDDTHFAHQIVGG 562
DS+ +R +L L ++MT +F G+ S ++ T G+D H +
Sbjct: 562 NDSSAIHPEGKRSMLKLARRMTDNFCAGVSTSSTREWSKLVGLTGNIGEDVHVMARKSVD 621
Query: 563 ATGEPAGLLLSATTTIWLPGVNPRHVYDHLRDEQCHGEWRCLLGEQLHQGNALPYGAPLN 622
G P G++LSA T++W+P V P +++ L ++ EW L N
Sbjct: 622 EPGTPPGVVLSAATSVWMP-VMPERLFNFLHNKGLRAEWDIL----------------SN 664
Query: 623 GETVPEFYRMVNGLHEGHAISLISPREMGGNISNTLLLQEARTDLSGSLIVYARTDVNTV 682
G + E + G G+ + L+ ++ L+LQE D SGS++VYA D+ +
Sbjct: 665 GGPMQEVTSIAKGQQNGNTVCLLKASPTKDKQNSMLILQETCADASGSMVVYAPVDIPAM 724
Query: 683 HSIMNSGLNPATVFLVSSGCAILPDCLESFPLHPAATADQAGTSSAAIASRSETGGSFVT 742
H +M+ G + + V L+ SG AILP AG S I + + GGS +T
Sbjct: 725 HLVMSGG-DSSCVALLPSGFAILP----------------AGPS---IGADHKMGGSLLT 764
Query: 743 VTYQMF 748
V +Q+
Sbjct: 765 VAFQIL 770
>Os02g0674800 Similar to OCL1 homeobox protein
Length = 804
Score = 273 bits (697), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 188/549 (34%), Positives = 285/549 (51%), Gaps = 75/549 (13%)
Query: 213 VSAMPSSVLQPAPAVSGANFPILHNLSANANDGYTEKNVLLDLANRAMEEFFSLMKENES 272
VS+ +V+ PA A +GA P L G +++V L+LA AM+E + + ++
Sbjct: 282 VSSPMGTVITPARA-TGAAIPSLV--------GNIDRSVFLELAISAMDELVKMAQMDD- 331
Query: 273 LLVKKKENGPLWLPHM-DILGVESLNYQEYLAKS-RTIGQKPVDFKVVVTRDTA-IVNGS 329
PLW+P + E LN++EYL IG KP + +R++ ++ +
Sbjct: 332 ---------PLWVPALPGSPSKEVLNFEEYLHSFLPCIGMKPAGYVSEASRESGLVIIDN 382
Query: 330 CVDLVKSLLDANRWRELFPGIVASANTTKIISTGPSNLHDGLLQLMRAELQVMSPEVPVC 389
+ LV++L+D RW ++F ++A A + +STG + +G L LM+AELQV+SP VP+
Sbjct: 383 SLALVETLMDERRWSDMFSCMIAKATVLEEVSTGIAGSRNGALLLMKAELQVLSPLVPIR 442
Query: 390 DVTFLRQSVQFGSGLWCVVDVSIDTILPGEXXXXXXXXXXXXXXXRRMEVRLLPSGCVIE 449
+VTFLR Q G W VVDVSID ++ ++ R +PSGCV++
Sbjct: 443 EVTFLRFCKQLAEGAWAVVDVSIDGLVRDHNSGTAPTGG-------NVKCRRVPSGCVMQ 495
Query: 450 EMENGYSKVTWMVHAAYDERAVPVLYHSLLRSAKALGACRWVASLQRHSQFLSGL--HKY 507
+ NGY KVTW+ H YDE +V LY LLRS A GA RW+A+LQR + L+ L
Sbjct: 496 DTPNGYCKVTWVEHTEYDEASVHQLYRPLLRSGLAFGARRWLATLQRQCECLAILMSSAT 555
Query: 508 IFCPDSTMTEVVMRRKVLYLVKQMTSSF-TGLFASMSK-------ATLQDGDDTHFAHQI 559
+ DST +R +L L ++MT +F G+ AS ++ AT G+D +
Sbjct: 556 VTANDSTAISQEGKRSMLKLARRMTENFCAGVSASSAREWSKLDGATGSIGEDVRVMARK 615
Query: 560 VGGATGEPAGLLLSATTTIWLPGVNPRHVYDHLRDEQCHGEWRCLLGEQLHQGNALPYGA 619
GEP G++LSA T++W+P V P +++ LRDEQ EW + L G
Sbjct: 616 SVSEPGEPPGVVLSAATSVWVP-VAPEKLFNFLRDEQLRAEW-----------DILSNGG 663
Query: 620 PLNGETVPEFYRMVNGLHEGHAISLISPREMGGNISNTLLLQEARTDLSGSLIVYARTDV 679
P+ E ++ G +G+++SL+ + N S+ L+LQE TD SGS++VYA D+
Sbjct: 664 PMQ-----EMTQIAKGQRDGNSVSLLRASAVSANQSSMLILQETCTDASGSIVVYAPVDI 718
Query: 680 NTVHSIMNSGLNPATVFLVSSGCAILPDCLESFPLHPAATADQAGTSSAAIASRSETGGS 739
+ +MN G + V L+ SG AILPD + G A+ ETGGS
Sbjct: 719 PAMQLVMNGG-DSTYVALLPSGFAILPD------------GPRIG------ATGYETGGS 759
Query: 740 FVTVTYQMF 748
+TV +Q+
Sbjct: 760 LLTVAFQIL 768
>Os04g0627000 Similar to Roc1
Length = 784
Score = 267 bits (683), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 214/691 (30%), Positives = 326/691 (47%), Gaps = 79/691 (11%)
Query: 37 GSSNQDKRNGLSQGENRMDTCTRKKPRRYQLLTMQQKETLNRAFQSCPNPDRNDLKKLAK 96
GS N D G+S + D R + +RY T Q + + F+ CP+PD K+L++
Sbjct: 85 GSENVD---GVSVDDQ--DPNQRPRKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSR 139
Query: 97 ELNMTETQIKYWFQNCRTKMKKFXXXXXXXXXXXXXXXXXXXXXXXXXRMKNSTCRACDL 156
EL + Q+K+WFQN RT+MK + +++C C
Sbjct: 140 ELGLEPLQVKFWFQNKRTQMKNQHERHENSQLRSDNEKLRAENMRYKEALSSASCPNCGG 199
Query: 157 PL----FHIDCRHW--ENPMLNKGNHGVTSNLIPQAVSSLLPSSSGFVASGSNLSSNAVL 210
P D H EN L + +++ ++P F + +++ A
Sbjct: 200 PAALGEMSFDEHHLRIENARLREEIDRISAIAAKYVGKPMVP----FPVLSNPMAAAASR 255
Query: 211 MPVSAMPSSVLQPAP-AVSGANFPILHNLSA-NANDGYTEKNVLLDLANRAMEEFFSLMK 268
P+ L AP V G F +K ++++LA AMEE + +
Sbjct: 256 APLD------LPVAPYGVPGDMFGGGGAGELLRGVQSEVDKPMIVELAVAAMEELVRMAQ 309
Query: 269 ENESLLVKKKENGPLW--LPHMDILG--VESLNYQEYLAK-SRTIGQKPVDFKVVVTRDT 323
+E PLW P +D +E+L+ +EY R +G K + +RD+
Sbjct: 310 LDE----------PLWSVAPPLDATAAAMETLSEEEYARMFPRGLGPKQYGLRSEASRDS 359
Query: 324 AIVNGSCVDLVKSLLDANRWRELFPGIVASANTTKIISTGPSNLHDGLLQLMRAELQVMS 383
A+V + +LV+ L+DAN++ +F IV+ A T +++STG + ++G LQ+M E QV S
Sbjct: 360 AVVIMTHANLVEILMDANQYAAVFSNIVSRAITLEVLSTGVAGNYNGALQVMSVEFQVPS 419
Query: 384 PEVPVCDVTFLRQSVQFGSGLWCVVDVSIDTILPGEXXXXXXXXXXXXXXXRRMEVRLLP 443
P VP + F+R Q G W VVDVS+D++ P ++ R P
Sbjct: 420 PLVPTRESYFVRYCKQNADGTWAVVDVSLDSLRPSPV----------------LKCRRRP 463
Query: 444 SGCVIEEMENGYSKVTWMVHAAYDERAVPVLYHSLLRSAKALGACRWVASLQRHSQFLSG 503
SGC+I+EM NGYSKVTW+ H D+R+V +Y L+ S A GA RWV +L R + L+
Sbjct: 464 SGCLIQEMPNGYSKVTWVEHVEVDDRSVHNIYKLLVNSGLAFGARRWVGTLDRQCERLAS 523
Query: 504 -LHKYIFCPD-STMTEVVMRRKVLYLVKQMTSSFT-GLFASMSK--ATL--QDGDDTHFA 556
+ I D +T R+ +L L ++M SF G+ AS++ TL +D
Sbjct: 524 VMASNIPTSDIGVITSSEGRKSMLKLAERMVVSFCGGVTASVAHQWTTLSGSGAEDVRVM 583
Query: 557 HQIVGGATGEPAGLLLSATTTIWLPGVNPRHVYDHLRDEQCHGEWRCLLGEQLHQGNALP 616
+ G P G++L+A T+ WLP V P+ V+D LRDE EW L
Sbjct: 584 TRKSVDDPGRPPGIVLNAATSFWLP-VPPKRVFDFLRDESSRSEWDIL------------ 630
Query: 617 YGAPLNGETVPEFYRMVNGLHEGHAISLISPREMGGNISNTLLLQEARTDLSGSLIVYAR 676
NG V E + NG +G+ +SL+ N SN L+LQE+ TD SGS ++YA
Sbjct: 631 ----SNGGIVQEMAHIANGRDQGNCVSLLRVNSSNSNQSNMLILQESCTDASGSYVIYAP 686
Query: 677 TDVNTVHSIMNSGLNPATVFLVSSGCAILPD 707
DV ++ ++N G +P V L+ SG AILPD
Sbjct: 687 VDVVAMNVVLNGG-DPDYVALLPSGFAILPD 716
>Os10g0575600 Homeodomain-related containing protein
Length = 882
Score = 203 bits (517), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 193/686 (28%), Positives = 296/686 (43%), Gaps = 84/686 (12%)
Query: 61 KPRRYQLLTMQQKETLNRAFQSCPNPDRNDLKKLAKELNMTETQIKYWFQNCRTKMKKFX 120
K +RY T Q + + F+ CP+PD KL++EL + Q+K+WFQN RT+MK
Sbjct: 134 KKKRYHRHTAHQIQQMEALFKECPHPDDKQRLKLSQELGLKPRQVKFWFQNRRTQMKAQQ 193
Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXRMKNSTCRACDLPLFHIDCRHWENPMLNKGNHGVTS 180
++N C C D +E L N +
Sbjct: 194 DRADNVILRAENENLKSDNFRLQAAIRNVVCPNCGHAAVLADMS-YEEQQLRIENARLKD 252
Query: 181 NLIPQAVSSLLPSSSGF---VASGSNLSSNA----VLMP----------------VSAMP 217
L A + G V S S LS + VLMP M
Sbjct: 253 ELDRLACIATRYGGGGGRQPVLSTSALSCISAPPPVLMPPLDLDMNVYSRHFAEQAPVMG 312
Query: 218 SSVLQPAPAVSGANFPILHNLSANANDGYTEKNVLLDLANRAMEEFFSLMKENESLLVKK 277
L P P V + + + A +K +++DLA A ++ + + E L V++
Sbjct: 313 CGDLIPPPVVPQHDGAAAYMGAMMAPVQEQDKQLVVDLAATAADQLARMCRAGEPLWVRQ 372
Query: 278 KENGPLWLPHMDILGVESLNYQEY--LAKSRTIGQKPVDFKVVV----TRDTAIVNGSCV 331
+ G E + +E+ + G K D V TRD A+V + +
Sbjct: 373 R-------------GAEVMAVEEHARMFSWPVDGAKQGDGGAVARAEGTRDNAVVIMNSI 419
Query: 332 DLVKSLLDANRWRELFPGIVASANTTKIISTGPSNLH--DGLLQLMRAELQVMSPEVPVC 389
+LV + LDAN+W ELFP IV A T +II+ G ++ H G L LM+AE+Q +SP V
Sbjct: 420 NLVDAFLDANKWMELFPSIVCKARTIQIINHGAASGHLGSGTLLLMQAEVQFLSPLVAAR 479
Query: 390 DVTFLRQSVQFG-SGLWCVVDVSIDTILPGEXXXXXXXXXXXXXXXRRMEVRLLPSGCVI 448
+V F R V G W +VD P E RR PSGC+I
Sbjct: 480 EVVFFRYCVHNADEGSWAIVD------FPAEGFEEGLLQASVVRCRRR------PSGCII 527
Query: 449 EEMENGYSKVTWMVHAAY--DERAVPVLYHSLLRSAKALGACRWVASLQRHSQFLSGLHK 506
++M NGYS+V W+ H +E+ + ++ + S A GA RW++ LQR + L+
Sbjct: 528 QDMPNGYSRVVWVEHMEMVGEEKPLQPVFRDYVASGAAFGATRWLSILQRQCERLASELA 587
Query: 507 YIFCPDSTMTEVVMRRKVLYLVKQMTSSFTG-LFASMSKATLQDGDDTHFAHQIV---GG 562
+ R ++ L ++M ++F + AS +++ D T ++
Sbjct: 588 RNIADLGVIRTPEARTNMMKLSQRMITTFCANISASGTQSWTALSDSTQDTIRVTTRKNT 647
Query: 563 ATGEPAGLLLSATTTIWLPGVNPRHVYDHLRDEQCHGEWRCLLGEQLHQGNALPYGAPLN 622
G+P+G++L+A +T WLP + + V++ L DEQ RC L E L N
Sbjct: 648 EPGQPSGVILTAVSTSWLPFTH-QQVFELLADEQ----QRCQL-EILS-----------N 690
Query: 623 GETVPEFYRMVNGLHEGHAISLISPREMGGNISNT-LLLQEARTDL-SGSLIVYARTDVN 680
G ++ E + NG H + ISL+ + N LLLQE+ T GSL+V+A DV+
Sbjct: 691 GGSLHEVAHIANGSHPRNCISLLRINAASNSSQNVELLLQESSTHPDGGSLVVFATVDVD 750
Query: 681 TVHSIMNSGLNPATVFLVSSGCAILP 706
+ M SG +P+ + L+ G AI P
Sbjct: 751 AIQVTM-SGEDPSYIPLLPLGFAIFP 775
>Os09g0526200 Similar to OCL3 protein
Length = 302
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 68/146 (46%), Positives = 89/146 (60%), Gaps = 17/146 (11%)
Query: 562 GATGEPAGLLLSATTTIWLPGVNPRHVYDHLRDEQCHGEWRCLLGEQLHQGNALPYGAPL 621
GA GEP G++LSATT++ LPG P+ V+D+LRDEQ G+W L
Sbjct: 92 GAPGEPPGVVLSATTSVRLPGTLPQRVFDYLRDEQRRGDWDILA---------------- 135
Query: 622 NGETVPEFYRMVNGLHEGHAISLISPREMGGNISNTLLLQEARTDLSGSLIVYARTDVNT 681
NGE + E + G H G+A+SL+ P GN +N L+LQE TD SGSL+VYA DV +
Sbjct: 136 NGEAMQEMDHIAKGQHHGNAVSLLRPNATSGNQNNMLILQETCTDSSGSLVVYAPVDVQS 195
Query: 682 VHSIMNSGLNPATVFLVSSGCAILPD 707
+H +MN G + A V L+ SG AILPD
Sbjct: 196 MHVVMNGG-DSAYVSLLPSGFAILPD 220
>Os01g0788800 Homeodomain-like containing protein
Length = 709
Score = 113 bits (283), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 132/529 (24%), Positives = 226/529 (42%), Gaps = 72/529 (13%)
Query: 229 GANFPILHNLSAN-ANDGYTEKNVLLDLANRAMEEFFSLMKENESLLVKKKENGPLWLPH 287
AN N SA+ G ++ ++ +LA AM +L++ + + LW P
Sbjct: 195 AANLAFQLNSSADYVFSGQHDQQMIAELAKNAMH----------ALIILAESHVALWFP- 243
Query: 288 MDILGVESLNYQEY-LAKSRTIGQKPVDFKVVVTRDTAIVNGSCVDLVKSLLDANRWREL 346
+ E LN Y A + FK TR ++V +V L+D +R
Sbjct: 244 VPGCSYEVLNKMAYDQAYPGDNSANAIGFKTEATRAVSMVMMDYKSVVDFLMDPYNYRTF 303
Query: 347 FPGIVASANTTKIISTGPSNLHDGLLQLMRAELQVMSPEVPVCDVTFLRQSVQFGSGLWC 406
FP +++ A T +I + S+ ++G++QLM E+ SP VP TFLR GL
Sbjct: 304 FPEVISGAVTNRIYTWPTSDGYNGVIQLMTVEMMFPSPLVPARKCTFLRYCNVLNEGLVV 363
Query: 407 VVDVSID--TILPGEXXXXXXXXXXXXXXXRRMEVRLLPSGCVIEEMENGYSKVTWMVHA 464
V+DVS+D +I + R +PSG +I+ + KVT + H
Sbjct: 364 VIDVSLDDGSIFS--------------------KCRKMPSGFLIQSIRPNSCKVTAIEHV 403
Query: 465 AYDERAVPVLYHSLLRSAKALGACRWVASLQRHSQFLSGLHKYIFCPDSTMTEVVMRRKV 524
D+ V LY + + GA RWVA++ R S + +H P + R+ +
Sbjct: 404 LADDTGVHELYQPCM-NGLVFGARRWVATMARQSARMRDVHHNKTAPQVSTKG---RKNL 459
Query: 525 LYLVKQMTSSFTGLFASMSKA--TLQDGDDTHFAHQIVGGATGEPAG---LLLSATTTIW 579
+ L + +SF G A+ T+ G T ++ T E + +LS T ++
Sbjct: 460 MKLADDLLASFAGGIAATGGGTWTVVIGAGTEKDIRVAYRRTTEGSSSYNAILSVTASLR 519
Query: 580 LPGVNPRHVYDHLRDEQCHGEWRCLLGEQLHQGNALPYGAPLNGETVPEFYRMVNGLHEG 639
LP + R +D LR+ +W L ++G V E + G+
Sbjct: 520 LP-LPMRKTFDLLRNLTHRCKWDVL----------------VHGSVVKEEVTIARGVGND 562
Query: 640 HAISLISPREMG-GNISNTLLLQEARTDLSGSLIVYARTDVNTVHSIMNSGLNPATVFLV 698
++++ + G + T++LQ D SGS +VY++ D +++++ L+P+ +
Sbjct: 563 DTVTVLHCKRAGREDRGRTMILQNNGYDASGSFMVYSQIDSELMNTMV---LSPSDLPPG 619
Query: 699 SSGCAILPDCLESFPLHPAATADQAGTSSAAIASRSETGGSFVTVTYQM 747
G ++ P F L P A Q S+ IA E GG+ +T+ +Q+
Sbjct: 620 RGGPSLYP---TGFSLLPDVEAAQ---DSSGIA-LGEVGGTLMTMGFQI 661
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.319 0.133 0.394
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 24,345,208
Number of extensions: 973208
Number of successful extensions: 2728
Number of sequences better than 1.0e-10: 7
Number of HSP's gapped: 2707
Number of HSP's successfully gapped: 7
Length of query: 786
Length of database: 17,035,801
Length adjustment: 109
Effective length of query: 677
Effective length of database: 11,344,475
Effective search space: 7680209575
Effective search space used: 7680209575
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 160 (66.2 bits)