BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os08g0193900 Os08g0193900|AK107386
(396 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os08g0193900 Cyclin-like F-box domain containing protein 661 0.0
Os08g0193600 Cyclin-like F-box domain containing protein 462 e-130
Os08g0195800 Cyclin-like F-box domain containing protein 305 5e-83
Os08g0196200 Leucine-rich repeat 2 containing protein 273 1e-73
Os02g0317300 Cyclin-like F-box domain containing protein 225 5e-59
Os02g0317500 Cyclin-like F-box domain containing protein 212 4e-55
Os08g0193300 154 2e-37
Os08g0195900 139 4e-33
Os08g0194000 133 3e-31
Os08g0195200 130 2e-30
Os08g0194200 129 3e-30
Os11g0637300 Cyclin-like F-box domain containing protein 127 1e-29
Os08g0195000 127 1e-29
Os08g0191300 125 5e-29
Os08g0194100 119 4e-27
Os08g0193200 Cyclin-like F-box domain containing protein 116 2e-26
Os08g0193500 Cyclin-like F-box domain containing protein 103 3e-22
Os02g0757700 Cyclin-like F-box domain containing protein 67 2e-11
>Os08g0193900 Cyclin-like F-box domain containing protein
Length = 396
Score = 661 bits (1705), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/379 (87%), Positives = 332/379 (87%)
Query: 18 GKPDYPPSELPDILRVRELRLAPRASSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 77
GKPDYPPSELPDILRVRELRLAPRASSL
Sbjct: 18 GKPDYPPSELPDILRVRELRLAPRASSLPNPNPHKPQPHPTIPSSTTTTTSGRRRNRRGR 77
Query: 78 XXXXXXKEGDARDWAGGLPLDAILAIFHKLDHIEILMGAGQVCRSWRRAARDEPQLWRRI 137
KEGDARDWAGGLPLDAILAIFHKLDHIEILMGAGQVCRSWRRAARDEPQLWRRI
Sbjct: 78 GRGRGRKEGDARDWAGGLPLDAILAIFHKLDHIEILMGAGQVCRSWRRAARDEPQLWRRI 137
Query: 138 DMRGHADLSFELNLFGMAQAAVRRSAGQCEAFWGEYAADEKLLHFLGERAPSVKSLRLIS 197
DMRGHADLSFELNLFGMAQAAVRRSAGQCEAFWGEYAADEKLLHFLGERAPSVKSLRLIS
Sbjct: 138 DMRGHADLSFELNLFGMAQAAVRRSAGQCEAFWGEYAADEKLLHFLGERAPSVKSLRLIS 197
Query: 198 CYDILNEGFSAAIKKFPXXXXXXXXXCSNIGESNVFEIVGKACPQLKRFRFSKDCFYSFE 257
CYDILNEGFSAAIKKFP CSNIGESNVFEIVGKACPQLKRFRFSKDCFYSFE
Sbjct: 198 CYDILNEGFSAAIKKFPLLEELELSLCSNIGESNVFEIVGKACPQLKRFRFSKDCFYSFE 257
Query: 258 DNEYEMDEEALGIATMHELRSLQLFANNLRNEGLAAILDNCPYLESLDIRHCFNVNMDDT 317
DNEYEMDEEALGIATMHELRSLQLFANNLRNEGLAAILDNCPYLESLDIRHCFNVNMDDT
Sbjct: 258 DNEYEMDEEALGIATMHELRSLQLFANNLRNEGLAAILDNCPYLESLDIRHCFNVNMDDT 317
Query: 318 LRAKCARIKTLRLPYDSTDDYDFQVQKPISLADFYSDSDDDCVYGGPDYILDSDEYDDYC 377
LRAKCARIKTLRLPYDSTDDYDFQVQKPISLADFYSDSDDDCVYGGPDYILDSDEYDDYC
Sbjct: 318 LRAKCARIKTLRLPYDSTDDYDFQVQKPISLADFYSDSDDDCVYGGPDYILDSDEYDDYC 377
Query: 378 DPYRYLDGVYEGVASGRAR 396
DPYRYLDGVYEGVASGRAR
Sbjct: 378 DPYRYLDGVYEGVASGRAR 396
>Os08g0193600 Cyclin-like F-box domain containing protein
Length = 484
Score = 462 bits (1188), Expect = e-130, Method: Compositional matrix adjust.
Identities = 252/397 (63%), Positives = 284/397 (71%), Gaps = 43/397 (10%)
Query: 21 DYPPSELPDILRVRELRLAPRASSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 80
+ P LPDILR E RLAPRA++L
Sbjct: 83 ELPYDPLPDILR--EFRLAPRAAALPSPNPNPNPAIPSSTTSRRRRRRGRG--------- 131
Query: 81 XXXKEGDARDWAGGLPLDAILAIFHKLDHIEILMGAGQVCRSWRRAARDEPQLWRRIDMR 140
+ RDWA GLP +AILA+ KLDH+EILMGAGQVCR+WRRAARD+PQLWRRIDM
Sbjct: 132 ---RGRGRRDWAAGLPREAILAVLRKLDHMEILMGAGQVCRAWRRAARDDPQLWRRIDML 188
Query: 141 GHADLSFELNLFGMAQAAVRRSAGQCEAFWGEYAADE----------------------- 177
HA+LSFELNLFGMAQAAVRRSAGQCEAFWGEYA +
Sbjct: 189 NHAELSFELNLFGMAQAAVRRSAGQCEAFWGEYAPTKICSISSEIATIIYSQMTGLWGDA 248
Query: 178 -KLLHFLG----ERAPSVKSLRLISCYDILNEGFSAAIKKFPXXXXXXXXXCSNIGESNV 232
++ FL +RAP +KSLRLISC+DIL+EGFSAA+KKFP C N+GE++V
Sbjct: 249 AMIIRFLTIVYEKRAPCLKSLRLISCFDILDEGFSAAVKKFPLLEELELTLCDNLGENDV 308
Query: 233 FEIVGKACPQLKRFRFSKDCFYSFEDNEYEMDEEALGIATMHELRSLQLFANNLRNEGLA 292
F+ VGKACPQLKRFR SK CFY+++ + Y DE+ALGIATMHEL SLQLFANNL NEGL
Sbjct: 309 FKAVGKACPQLKRFRLSKRCFYNYKHSGYNKDEQALGIATMHELSSLQLFANNLSNEGLT 368
Query: 293 AILDNCPYLESLDIRHCFNVNMDDTLRAKCARIKTLRLPYDSTDDYDFQVQKPI-SLADF 351
AILDNCP+LESLDIRHCFNV+MDDTL+AKCARIKTLRLPYDSTDDYDFQV KPI S ADF
Sbjct: 369 AILDNCPFLESLDIRHCFNVSMDDTLQAKCARIKTLRLPYDSTDDYDFQVHKPIWSGADF 428
Query: 352 YSDSDDDCVYGGPDYILDSDEYDDYCDPYRYLDGVYE 388
+SDSDDDC+YGGPDYILDSDEYDDYCDPY YLDGVYE
Sbjct: 429 FSDSDDDCIYGGPDYILDSDEYDDYCDPYIYLDGVYE 465
>Os08g0195800 Cyclin-like F-box domain containing protein
Length = 346
Score = 305 bits (780), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 177/315 (56%), Positives = 207/315 (65%), Gaps = 23/315 (7%)
Query: 84 KEGDARDWAGGLPLDAILAIFHKLDHIEILMGAGQVCRSWRRAARDEPQLWRRIDMRGHA 143
KE +ARDWA GLPLDAILAIFHKL H +ILM A QVC +WRRAARDEP LWRRI +RG
Sbjct: 19 KEEEARDWADGLPLDAILAIFHKLGHADILMAADQVCATWRRAARDEPALWRRITVRGTE 78
Query: 144 DLSFELNLFGMAQAAVRRSAGQCEAFWGEYAADEKLLHFLGERAPSVKSLRLISCYDILN 203
LS +N G+A AAVRRSAGQCEAF GEYA D+ L +L E+A +KSLRLISC + N
Sbjct: 79 ALSARINRGGLACAAVRRSAGQCEAFCGEYAGDDGFLVYLTEQASCLKSLRLISCLGVSN 138
Query: 204 EGFSAAIKKFPXXXXXXXXXCSNIGESNVFEIVGKACPQLKRFRFSKDCFYSFEDNEYEM 263
EG A K+FP C N+ + +G ACPQLKRFR SK FY ++
Sbjct: 139 EGIEEATKEFPLLEELELSFCYNVTH-EAYAAIGAACPQLKRFRLSKRSFYDSGGIRWKN 197
Query: 264 DEEALGIATMHELRSLQLFANNLRNEGLAAILDNCPYLESLDIRHCFNVNMD-DTLRAKC 322
+++A GI+ MH LRSLQLFANNL NEGL+ ILDNCP LESLDIRHCFN++M D+LRAKC
Sbjct: 198 NDDAGGISKMHGLRSLQLFANNLTNEGLSTILDNCPNLESLDIRHCFNIDMGADSLRAKC 257
Query: 323 ARIKTLRLPYDSTDDYDFQVQKPISL------ADFYSDSDDDCVYGGPDYILDSDEYDD- 375
+RIK LR P DSTDDYDF V P L +YS VY P+Y + SDE+
Sbjct: 258 SRIKMLRPPDDSTDDYDFDVYTPRRLPISPGFVRYYS------VYSDPEYSMYSDEWTSE 311
Query: 376 --------YCDPYRY 382
Y P RY
Sbjct: 312 EFDDDDDDYSGPSRY 326
>Os08g0196200 Leucine-rich repeat 2 containing protein
Length = 265
Score = 273 bits (699), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 142/221 (64%), Positives = 164/221 (74%), Gaps = 5/221 (2%)
Query: 139 MRGHA--DLSFELNLFGMAQAAVRRSAGQCEAFWGEYAADEKLLHFLGERAPSVKSLRLI 196
MRGHA D +NL GMAQAAV+RSAG+CEAFWGE A ++ L FLG AP +KSLRLI
Sbjct: 1 MRGHANADAKRGVNLHGMAQAAVKRSAGRCEAFWGESAGSDRFLLFLGRAAPGLKSLRLI 60
Query: 197 SCYDILNEGFSAAIKKFPXXXXXXXXXCSNIGESNVFEIVGKACPQLKRFRFSKDCFYSF 256
SCYD+ N+GF AIKKFP N+ ++VF VGK+CPQLKRFR S+ F+SF
Sbjct: 61 SCYDVSNKGFGKAIKKFPLLEELELSLSPNVFGTDVFRTVGKSCPQLKRFRLSQHGFHSF 120
Query: 257 EDNEYEMDEEALGIATMHELRSLQLFANNLRNEGLAAILDNCPYLESLDIRHCFNVNMDD 316
ED+ D+EALGIATM +LRSLQ+F N + NEGL AILDNCP+LESLDIRHCFNV MDD
Sbjct: 121 EDSHD--DDEALGIATMTQLRSLQIFGNTITNEGLEAILDNCPHLESLDIRHCFNVFMDD 178
Query: 317 TLRAKCARIKTLRLPYDSTDDYDFQVQKPISLADFYSDSDD 357
TLRAKCARIK LRLP DS DDYD QV P+ AD + SDD
Sbjct: 179 TLRAKCARIKALRLPDDSIDDYDLQVFSPV-FADSGNSSDD 218
>Os02g0317300 Cyclin-like F-box domain containing protein
Length = 328
Score = 225 bits (573), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 120/261 (45%), Positives = 168/261 (64%), Gaps = 7/261 (2%)
Query: 85 EGDARDWAGGLPLDAILAIFHKLDHIEILMGAGQVCRSWRRAARDEPQLWRRIDMRGHAD 144
E ++RDWA +P DA+ A+F KLD ++L+GAG VCR+WRR A +P LWRR+DM D
Sbjct: 16 EVESRDWAE-MPSDALAAVFGKLDVTDLLVGAGVVCRAWRRLAAIDPTLWRRVDMSHQGD 74
Query: 145 LSFELNLFGMAQAAVRRSAGQCEAFWGEYAADEKLLHFLGERAPSVKSLRLISCYDILNE 204
+ MA+AAV R+AG EAFW + + LL ++ ERA S+KSL+L C ++ NE
Sbjct: 75 IMEVDEAVAMARAAVDRAAGTMEAFWADSFVTDGLLLYISERASSLKSLQLSMCLNVSNE 134
Query: 205 GFSAAIKKFPXXXXXXXXXCSNIGESNVFEIVGKACPQLKRFRFSKDCFYSFEDNEYEM- 263
G + A+K FP CS G +V VGKACP+LK FR ++ + ++
Sbjct: 135 GMAEAMKGFPRLEELDITFCSLYG--DVCASVGKACPELKCFRLNERYTLQMDYAAPDIM 192
Query: 264 --DEEALGIAT-MHELRSLQLFANNLRNEGLAAILDNCPYLESLDIRHCFNVNMDDTLRA 320
D EALGIA+ M +LR LQL N L N+GL +ILD+C +LESLDIR C+++ MDD L++
Sbjct: 193 DDDTEALGIASNMPKLRELQLIGNKLTNDGLMSILDHCQHLESLDIRQCYSIQMDDALKS 252
Query: 321 KCARIKTLRLPYDSTDDYDFQ 341
KC+RI L+LP+DS D+ ++
Sbjct: 253 KCSRISDLKLPHDSISDFKYR 273
>Os02g0317500 Cyclin-like F-box domain containing protein
Length = 330
Score = 212 bits (540), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 117/254 (46%), Positives = 162/254 (63%), Gaps = 8/254 (3%)
Query: 90 DWAGGLPLDAILAIFHKLDHIEILMGAGQVCRSWRRAARDEPQLWRRIDMRGHADLSFEL 149
+WA LP+DA+LA+F +L E+LMGAG VCRSW RAA EP+LWRR+D+ D + ++
Sbjct: 10 EWAD-LPVDAVLAVFERLGAAEVLMGAGVVCRSWLRAATREPRLWRRVDLTACFDPTVDM 68
Query: 150 NLFGMAQAAVRRSAGQCEAFWGEYAADEKLLHFLGERAPSVKSLRLISCYDILNEGFSAA 209
MA+AAV R+ G+ E F E ++LL ++ +R +KSLRL C I +G A
Sbjct: 69 E--AMARAAVDRAGGRLEHFAAERFVTDELLLYVAKRTSCLKSLRLRDCIKISEKGLVAV 126
Query: 210 IKKFPXXXXXXXXXCSNIGESNVFEIVGKACPQLKRFRFSKDCFYSFEDNEYEMDEEALG 269
K P C+ S + + VG+A P LK R + ++ + +E+ + ALG
Sbjct: 127 GKTSPCLEELELTTCTI---SILLKAVGEAFPNLKCLRLNHR-WFDVQFDEFRDNFHALG 182
Query: 270 IA-TMHELRSLQLFANNLRNEGLAAILDNCPYLESLDIRHCFNVNMDDTLRAKCARIKTL 328
IA +MH LR LQ+FAN LRN LAAILDNCP+LESLD+R CFNV++D +RAKCAR+K +
Sbjct: 183 IACSMHRLRHLQIFANRLRNNALAAILDNCPHLESLDLRQCFNVDVDAEVRAKCARLKDV 242
Query: 329 RLPYDSTDDYDFQV 342
R P DST DY+++
Sbjct: 243 RFPNDSTKDYEYET 256
>Os08g0193300
Length = 333
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 101/269 (37%), Positives = 142/269 (52%), Gaps = 31/269 (11%)
Query: 89 RDWAGGLPLDAILAIFHKLDHIEILMGAGQVCRSWRRAARDEPQLWRRIDMRGHADLSFE 148
RDW+ LP+DA+ AIF KL +EILMGA VC SW AA P+LWR +DM H + +
Sbjct: 15 RDWSE-LPVDALSAIFTKLGTVEILMGASFVCHSWL-AASKSPELWRFVDMTRHKVIFSK 72
Query: 149 LN--LFGMAQAAVRRSAGQCEAFWGEYAADEKLLHFLGERAPSVKSLRLISCYDILNEGF 206
L MA+AA+ RS GQ E+FW + +LL ++ RA ++KS+RL++C I +
Sbjct: 73 RTGILCAMAKAAIDRSDGQIESFWAQKFVTGELLDYIVRRASTLKSIRLVACTFIQWQSL 132
Query: 207 SAAIKKFPXXXXXXXXXCS-NIGESNVFEIVGKACPQLKRFRFSKDCF------------ 253
+ K P CS + ++ F+ VG+ P LKR R F
Sbjct: 133 AMLAAKCPLLEEIE---CSYHKMPADFFKCVGRVRPNLKRLRVHMHYFDQDELENELIKH 189
Query: 254 ----------YSFEDNEYEMDEEALGIA-TMHELRSLQLFANNLRNEGLAAILDNCPYLE 302
FE E + +A IA MHELR LQ+ +NL G+ AILD CP+LE
Sbjct: 190 VLEEGGEVFEEPFEQREARRNADAFAIAENMHELRLLQIAGHNLTEIGVRAILDGCPHLE 249
Query: 303 SLDIRHCFNVNMDDTLRAKCARIKTLRLP 331
LD+ C ++ +D L+A+ A I+ +RLP
Sbjct: 250 CLDLSSCHDIYVDGQLQARFAMIRHVRLP 278
>Os08g0195900
Length = 302
Score = 139 bits (350), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 70/132 (53%), Positives = 90/132 (68%), Gaps = 6/132 (4%)
Query: 88 ARDWAGGLPLDAILAIFHKLDHIEILMGAGQVCRSWRRAARDEPQLWRRIDMRGHADLSF 147
ARDWA LP+DAIL +F LDH++ILMGAG C+SWR AARDEP LWRRIDMRG A L +
Sbjct: 36 ARDWAE-LPVDAILQVFRWLDHVDILMGAGLACQSWRAAARDEPALWRRIDMRGFACLPY 94
Query: 148 EL-----NLFGMAQAAVRRSAGQCEAFWGEYAADEKLLHFLGERAPSVKSLRLISCYDIL 202
+ MA+ AVRRS G+CE FW + D+++L FL + AP ++S+RL+ C +
Sbjct: 95 WQRHRRDTVRAMAREAVRRSDGRCEEFWSKVGGDDEVLQFLADHAPYLRSIRLVKCDHVS 154
Query: 203 NEGFSAAIKKFP 214
EG SA I+ P
Sbjct: 155 KEGISAIIQSCP 166
>Os08g0194000
Length = 389
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 94/277 (33%), Positives = 136/277 (49%), Gaps = 50/277 (18%)
Query: 87 DARDWAGGLPLDAILAIFHKLDHIEILMGAGQVCRSWRRAARDEPQLWRRIDMRGHADLS 146
D RDW+ LP+DA+ F K+ IEILMGAG VC SW AA+ P LWR +DM H +
Sbjct: 40 DERDWSE-LPVDALSVFFAKIGAIEILMGAGLVCHSWLEAAK-VPDLWRSLDMTRHK-VI 96
Query: 147 FELN---LFGMAQAAVRRSAGQCEAFWGEYAADEKLLHFLGERAPSVKSLRLISCYDILN 203
F+ + MA+ AV RSAG+ E+FW + LL ++GER S+KS+RLI+ +
Sbjct: 97 FKKTIGVMCAMARVAVDRSAGKLESFWAQNFVTSDLLKYIGERTTSLKSIRLIAYTRVPW 156
Query: 204 EGFSAAIKKFPXXXXXXXXXCSNIGESNVFEIVGKACPQLKRFRFSKDCFYSFEDNEYEM 263
+ K P ++ E FE +G CPQL+ R + D F ++D +Y++
Sbjct: 157 KELVNLAAKSPLLEDLEHSYRDSLEE--FFEHLGCKCPQLRCLRVNNDGFV-YDDAKYDL 213
Query: 264 DEEALGIA------------------------------TMHELRSLQLFANNLRNEGLAA 293
++ +G +MHELR LQ+ N L N G+ A
Sbjct: 214 MDQVIGDHDDDDDEEDELEYGPWDWPSNNNGVAFAIAESMHELRILQITNNTLTNAGVLA 273
Query: 294 ILDNCPYLESLDIRHCFNVNMDDTLRAKCARIKTLRL 330
ILD+C NV+ +D LRA+ A ++ L
Sbjct: 274 ILDSCN-----------NVSPNDQLRARWASLRHFNL 299
>Os08g0195200
Length = 261
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 89/254 (35%), Positives = 123/254 (48%), Gaps = 23/254 (9%)
Query: 87 DARDWAGGLPLDAILAIFHKLDHIEILMGAGQVCRSWRRAARDEPQLWRRIDMRGHADLS 146
+ RDW+ LPLDA+ +F KL R A P LWR +DM
Sbjct: 28 ETRDWSE-LPLDALSVVFGKLP---------------RHRAAKLPHLWRCVDMSHSHPRD 71
Query: 147 FELNLFGMAQAAVRRSAGQCEAFWGEYAADEKLLHFLGERAPSVKSLRLISCYDILNEGF 206
MA+ AV RS G+ E F G+ LL ++ +R+P +K L L SC + N+G
Sbjct: 72 VSRRNCAMAKVAVDRSGGKLEVFKGKRFVTNNLLTYVADRSPCLKCLYLESCTSVSNKGL 131
Query: 207 SAAIKKFPXXXXXXXXXCSNIGESNVFEIVGKACPQLKRFRFSKDCFYSFEDNEYEMDEE 266
+ I K P C NI + +VF + GKAC ++KR + Y +E
Sbjct: 132 TELITKCPMLEDLTLYSCRNI-DGDVFVVAGKACRRMKRLHVR----WCGALPAYFDGDE 186
Query: 267 ALGIATMHELRSLQLFANNLRNEGLAAILDNCPYLESLDIRHCFNV-NMDDTLRAKCARI 325
+GIATM ELR L L + E L AI+D CP L+ L + C + +DD L+AKCA I
Sbjct: 187 PVGIATMRELRHLTLEGIGVSQEKLMAIVDGCPQLDLLHVSGCPGLAAVDDALQAKCAGI 246
Query: 326 KTLRL-PYDSTDDY 338
K+L L PY + +
Sbjct: 247 KSLTLRPYQELEVW 260
>Os08g0194200
Length = 253
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 96/264 (36%), Positives = 131/264 (49%), Gaps = 39/264 (14%)
Query: 89 RDWAGGLPLDAILAIFHKLDHIEILMGAGQVCRSWRRAARDEPQLWRRIDMRGHADLSFE 148
RDW+ LP+D + +F KL EILMGAG VC SW AA+ P LWR +D+ + +
Sbjct: 17 RDWSE-LPVDVLSVVFAKLGAAEILMGAGIVCSSWLHAAK-LPHLWRCVDIPQV--VRND 72
Query: 149 LNLFGMAQAAVRRSAGQCEAFWGEYAADEKLLHFLGERAPSVKSLRLISCYDILNEGFSA 208
MA+ AV RS + E F Y D++LL ++G R+P +KSL L SC + N G +
Sbjct: 73 AVCCAMAKVAVDRSDERLEVFKAMYFVDDELLKYIGHRSPGLKSLCLDSCSMVSNTGLTQ 132
Query: 209 AIKKFPXXXXXXXXXCSNIGESNVFEIVGKACPQLKRFRFSKDCFYSFEDNEYEMDEEAL 268
+ P + E V R D F+D L
Sbjct: 133 LMAMTP------------LLEDLV-------------LRGGLDLSDEFDD--------PL 159
Query: 269 GIATMHELRSLQLFANNLRNEGLAAILDNCPYLESLDIRHCFNVN-MDDTLRAKCARIKT 327
I TMH+LR + L + + + L +D+CP+LE LD C V+ +DD LRAKCARIKT
Sbjct: 160 VIPTMHQLRQIALGSLYISRKTLTKFVDSCPHLELLDASECVAVDVVDDALRAKCARIKT 219
Query: 328 LRLP-YDSTDDYDFQVQKPISLAD 350
L+LP Y S D + + LAD
Sbjct: 220 LKLPSYSSATDAMATLDQLYYLAD 243
>Os11g0637300 Cyclin-like F-box domain containing protein
Length = 252
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 90/254 (35%), Positives = 127/254 (50%), Gaps = 45/254 (17%)
Query: 88 ARDWAGGLPLDAILAIFHKLDHIEILMGAGQVCRSWRRAARDEPQLWRRIDMRGHADLSF 147
RDW+ LP D + +F K+ +E+L GAG CRSW AAR P+LWR +DM A
Sbjct: 19 GRDWSE-LPADVLSVVFAKVGAVEVLAGAGLACRSWLDAAR-VPELWRAVDMLRGAVRCL 76
Query: 148 ELN-----LFGMAQAAVRRSAGQCEAFWGEYAADEKLLHFLGERAPSVKSLRLISCYD-- 200
L + MA+ AV RS G+ E F GE ++LL ++G+R+PS+K + + C D
Sbjct: 77 HLGQDRDLMCAMAKVAVDRSGGRLEVFKGEDFVSDELLEYIGDRSPSLKVIS-VWCSDET 135
Query: 201 -ILNEGFSAAIKKFPXXXXXXXXXCSNIGESNVFEIVGKACPQLKRFRFSKDCFYSFEDN 259
+ EGF+ +K P + E V G P L R
Sbjct: 136 RMSTEGFAELTRKCP------------LLEEIVLSSGGHRRPPLPRL------------- 170
Query: 260 EYEMDEEALGIATMHELRSLQLFANNLRNEGLAAILDNCPYLESLDIRHCFNVNMDD--T 317
AL +A + LR L + + N+ L AI+D CP LE LD+ C+++ +DD
Sbjct: 171 -------ALAVAELRHLRRLTVQGIGVSNDELTAIVDGCPRLELLDVCSCWDLCVDDDAQ 223
Query: 318 LRAKCARIKTLRLP 331
L AKCARI+TL+LP
Sbjct: 224 LLAKCARIRTLKLP 237
>Os08g0195000
Length = 250
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 93/244 (38%), Positives = 132/244 (54%), Gaps = 13/244 (5%)
Query: 87 DARDWAGGLPLDAILAIFHKLDHIEILMGAGQVCRSWRRAARDEPQLWRRIDMRGHADLS 146
++RDW+ LP+DA IF KL IE+LMGAG VC SW AA+ P LW+ ++M H LS
Sbjct: 9 ESRDWSE-LPMDAFSVIFAKLGAIELLMGAGLVCHSWLHAAK-LPHLWQCVEMVHHEALS 66
Query: 147 FE--LNLFGMAQAAVRRSAGQCEAFWGEYAADEKLLHFLGERAPSVKSLRLISCYDILNE 204
+ + + MA+AAV RS G+ EAF G++ ++ LL+++ +R+P +K L L+SCY + E
Sbjct: 67 LKEPIVMSEMARAAVDRSDGRLEAFEGQWFVNDGLLNYIRDRSPKLKRLCLVSCYSVYKE 126
Query: 205 GFSAAIKKFPXXXXXXXXXCSNIGESNVFEIVGKACPQLKRFRFSKDCFYSFEDNEYEMD 264
F I K P C ++ + I GK+ PQLKRF +FE Y D
Sbjct: 127 AFIEFIAKCPLIEDIALINCGSVVFHALNVITGKSFPQLKRFELRT----AFERPCYGCD 182
Query: 265 EEALGIATMHELRSLQLFA-NNLRNEGLAAILDNCPYLESLDIRHCFNVNMDDTLRAKCA 323
LGI T+ L+ L L ++ NE A+ L + +M TLRAKCA
Sbjct: 183 -VPLGIPTVRHLQHLILGGIIDIDNEEPPAL---TLILLASGSAMSSRSSMLRTLRAKCA 238
Query: 324 RIKT 327
+IK
Sbjct: 239 KIKI 242
>Os08g0191300
Length = 319
Score = 125 bits (314), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 88/250 (35%), Positives = 127/250 (50%), Gaps = 18/250 (7%)
Query: 89 RDWAGGLPLDAILAIFHKLDHIEILMGAGQVCRSWRRAARDEPQLWRRIDMRGHADLSFE 148
RDW+ LP+DA+ +F KL +E+LMGAG VCR W A + P LWR +D+
Sbjct: 15 RDWSE-LPVDALSVVFAKLGAVEVLMGAGLVCRPWLDATK-LPHLWRCVDIAAMKKKRAV 72
Query: 149 LNLFGMAQAAVRRSAGQCEAFWGEYAADEKLLHFLGERAPSVKSLRLISCYDILNEGFSA 208
L + MA AV+R+ GQ EAF KLL +G+ +P++K L L SC + + G +
Sbjct: 73 LCV--MADEAVKRADGQLEAFMAGAFVTNKLLKHVGDSSPTLKRLWLESCSLVTSNGLAQ 130
Query: 209 AIKKFPXXXXXXXXXCSNI-----GESNVFEIVGKACPQLKRFRFSKDCFYSFEDNEYEM 263
I P C + G V+ V +ACP+L+R + + ++ D++
Sbjct: 131 MIAMAPLLEELVLSYCRKVRGGGGGGGGVYAAVAEACPRLRRLEVRR--YPAWRDDDGGG 188
Query: 264 DEE---ALGIATMHELRSLQLFA-NNLRNEGLAAILD-NCPYLESLDIRHCFNVNMDDT- 317
D LGIA M ELR L L ++ LAAI+D CP+LE L + C + D
Sbjct: 189 DHHRRRPLGIAAMRELRHLTLVGVAGAGDDELAAIVDGGCPHLEVLHVSECPGLAAVDVA 248
Query: 318 -LRAKCARIK 326
LR+KC +K
Sbjct: 249 ALRSKCGGVK 258
>Os08g0194100
Length = 284
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 74/214 (34%), Positives = 110/214 (51%), Gaps = 30/214 (14%)
Query: 153 GMAQAAVRRSAGQCEAFWGEYAADEKLLHFLGERAPSVKSLRLISCY---DILNEGFSAA 209
MA+ AV RS G+ E F G +++LL ++G+R+PS+K L LIS + DI + F+
Sbjct: 51 AMAKVAVDRSDGRLEVFEGYGFVNDELLQYIGDRSPSLKGLSLISLFSYLDISKKVFTEF 110
Query: 210 IKKFPXXXXXXXXXCSNIGESNVFEI------------------------VGKACPQLKR 245
I K P IG F + + K+C QLKR
Sbjct: 111 ISKCPCLEDLVVEEGGFIGGETGFTLSVEVTEMTEISVRNFQPCGEIVLAIAKSCTQLKR 170
Query: 246 FRFSKDCFYSFEDNEYEMDEEALGIATMHELRSLQLFANNLRNEGLAAILDNCPYLESLD 305
+ + +++ D+ +E GIATM +LR L L + + NE L AI+D CP+LE LD
Sbjct: 171 LKLT---VHTYPDSRGFFVDEPFGIATMKQLRHLILGSICIGNEELMAIIDACPHLELLD 227
Query: 306 IRHCFNVNMDDTLRAKCARIKTLRLPYDSTDDYD 339
+ C+ +++DD LR KCA IKT++LP + D D
Sbjct: 228 VSKCYKLDVDDALRTKCAGIKTVKLPLSLSHDGD 261
>Os08g0193200 Cyclin-like F-box domain containing protein
Length = 340
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/234 (35%), Positives = 118/234 (50%), Gaps = 33/234 (14%)
Query: 89 RDWAGGLPLDAILAIFHKLDHIEILMGAGQVCRSWRRAARDEPQLWRRIDMRGHADLSFE 148
RDW+ LP+DA+ A+F KL +EILMGA VC SW AA P+LWR +DM H + +
Sbjct: 14 RDWSK-LPVDALSAVFMKLGTVEILMGASFVCHSW-LAASKSPELWRFVDMTRHKVIFSK 71
Query: 149 LN--LFGMAQAAVRRSAGQCEAFWGEYAADEKLLHFLGERAPS-VKSLRLISCYDILNEG 205
L MA+AA+ RS G+ E+FW + +LL ++ RA S +KS+RLI+C + +
Sbjct: 72 GTDILCAMAKAAIDRSDGRMESFWAQKFVTCELLDYIVSRASSTLKSIRLIACTFVWGQS 131
Query: 206 FSAAIKKFPXXXXXXXXXCSNIGES-NVFEIVGKACPQLKRFRFSKDCF----------- 253
+ + P CS+ S + F+ VG PQLKR R F
Sbjct: 132 LATLAARCP---LLEEIECSHHKMSADFFKYVGIVRPQLKRLRVHMPYFDYDAMEDEMKE 188
Query: 254 ------------YSFEDNEYEMDEEALGIA-TMHELRSLQLFANNLRNEGLAAI 294
FE E + +A IA MHELR LQ+ NNL N+G++ +
Sbjct: 189 HHNEDEDDDEYEEPFEQWEARRNVDAFAIAENMHELRLLQISGNNLTNKGVSEL 242
>Os08g0193500 Cyclin-like F-box domain containing protein
Length = 447
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 65/170 (38%), Positives = 91/170 (53%), Gaps = 10/170 (5%)
Query: 88 ARDWAGGLPLDAILAIFHKLDHIEILMGAGQVCRSWRRAARDEPQLWRRIDMRGHADLSF 147
RDW+ LP DA+ IF KL IE+LMGAG VC SW AA+ P+LWR +DM H + F
Sbjct: 13 VRDWSD-LPTDALSTIFMKLGSIEVLMGAGLVCHSWLAAAKS-PELWRSVDMTRH-KVVF 69
Query: 148 EL---NLFGMAQAAVRRSAGQCEAFWGEYAADEKLLHFLGERAPSVKSLRLISCYDILNE 204
+ MA+ A+ RS G+ E+F + +LL ++ RA S+KS+RLI+C +
Sbjct: 70 SKGIDTMCAMAKVAIDRSQGKMESFLAQKFVTSELLDYIACRASSLKSIRLIACRNFWEP 129
Query: 205 GFSAAIKKFPXXXXXXXXXCSNIGESNVFEI-VGKACPQLKRFRFSKDCF 253
+ + P CS S+ F + VG+A PQLKR + F
Sbjct: 130 SLAELATQCP---LLEEIECSGNKMSSEFLVYVGRARPQLKRLKIHMRWF 176
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/76 (51%), Positives = 51/76 (67%), Gaps = 1/76 (1%)
Query: 260 EYEMDEEALGIA-TMHELRSLQLFANNLRNEGLAAILDNCPYLESLDIRHCFNVNMDDTL 318
E +++A IA M ELR LQ+ NNL N+G+ AILD CP+LE D+ C+NV +DD L
Sbjct: 288 EVRKNKDAFAIAENMPELRLLQISGNNLTNKGVHAILDGCPHLECFDLSECYNVRVDDQL 347
Query: 319 RAKCARIKTLRLPYDS 334
RA+CA+IK LP S
Sbjct: 348 RARCAKIKHAWLPRQS 363
>Os02g0757700 Cyclin-like F-box domain containing protein
Length = 324
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 118/295 (40%), Gaps = 23/295 (7%)
Query: 86 GDARDWAGGLPLDAILAIFHKLDHIEILMGAGQVCRSWRRAARDEPQLWRRIDMR-GHAD 144
G+ R W LP DA+ +F L E+L +VC+SW R P W+ ID+
Sbjct: 7 GEYRCWEELLP-DALGLVFRNLPLREVLTVVPRVCKSWSRVVAG-PYCWQEIDIEEWRQQ 64
Query: 145 LSFELNLFGMAQAAVRRSAGQCEAFWGEYAADEKLLHFLGERAPSVKSLRLISCYDILNE 204
L M + V RS G C + L F+G+ A ++++L I +I +
Sbjct: 65 QGKPEQLVRMVEMLVARSCGSCRRISVSGLPGDPLFSFIGDHARALRTLE-IPRSEISDA 123
Query: 205 GFSAAIKKFPXXXXXXXXXCSNIGESNVFEIVGKACPQL---KRFRFSKDCFYSFEDNEY 261
+ + P C+ IG + E GK C L +R D
Sbjct: 124 AVESVAPRLPNVTFLDISSCTKIG-ARALEAFGKNCKSLVGLRRVMHPTD----VAGKAC 178
Query: 262 EMDEEALGIATMHELRSLQLFANNLRNEGLAAILDNCPYLESLDIRHCFNVNMDDTLRAK 321
+ DE TM LR L++ + + + IL C L LD+R C+ V DD +
Sbjct: 179 QRDEARAIACTMPRLRHLEMGYMVIATDAVLDILARCRDLRFLDLRGCWAV--DDKFLQE 236
Query: 322 CARIKTLRLPYDSTDDYDFQVQKPISLADFYSDSDDDCVYGGPDYILDSDEYDDY 376
R LR+ DD F+ +D+ SDD +Y + L D+ DDY
Sbjct: 237 --RHPGLRVLGPGVDDC-FENSYLEECSDY---SDDSSIY---SWELMEDDDDDY 282
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.322 0.140 0.435
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 12,223,044
Number of extensions: 490869
Number of successful extensions: 1561
Number of sequences better than 1.0e-10: 19
Number of HSP's gapped: 1516
Number of HSP's successfully gapped: 22
Length of query: 396
Length of database: 17,035,801
Length adjustment: 103
Effective length of query: 293
Effective length of database: 11,657,759
Effective search space: 3415723387
Effective search space used: 3415723387
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 157 (65.1 bits)