Os08g0195800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cyclin-like F-box domain containing protein.
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Os08g0195800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cyclin-like F-box domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 297.47 | 0.81 | 3.86 | 2.11 | 0.541 | 0.377 | 0.439 | 4.03 | 0.0851 | 18 | 10 | 1452 | -- | -- |
| 316.88 | 0.829 | 3.89 | 2.31 | 0.557 | 0.42 | 0.567 | -- | 0.16 | 18 | 20.05 | 1362 | -- | -- |
| 297.93 | 0.804 | 3.86 | 2.11 | 0.543 | 0.381 | -- | 4.04 | 0.0862 | 17.9 | 9.99 | 1456 | -- | -- |
| 316.99 | 0.829 | 3.89 | 2.42 | 0.554 | 0.457 | -- | -- | 0.161 | 18 | 20.56 | 1360 | -- | -- |
| 313.24 | 0.824 | 3.85 | 2.1 | -- | 0.393 | -- | 4.11 | 0.0643 | -- | 9.999 | 1458 | -- | -- |
| 326.84 | 0.848 | 3.91 | 2.28 | 0.571 | -- | 0.513 | -- | 0.0399 | 17.5 | -- | -- | -- | -- |
| 327.49 | 0.847 | 3.91 | 2.28 | 0.574 | -- | -- | -- | 0.0422 | 17.5 | -- | -- | -- | -- |
| 333.01 | 0.85 | 3.89 | 2.4 | -- | 0.509 | -- | -- | 0.149 | -- | 20.56 | 1371 | -- | -- |
| 441.53 | 0.979 | 3.88 | -- | 0.408 | 0.57 | -- | -- | -0.113 | 18.8 | 39.9 | 11337 | -- | -- |
| 344.62 | 0.867 | 3.9 | 2.26 | -- | -- | -- | -- | 0.0282 | -- | -- | -- | -- | -- |
| 463.93 | 1.01 | 3.97 | -- | 0.537 | -- | -- | -- | -0.211 | 17.7 | -- | -- | -- | -- |
| 447.87 | 0.986 | 3.91 | -- | -- | 0.99 | -- | -- | -0.111 | -- | 39.99 | 11447 | -- | -- |
| 478.92 | 1.02 | 3.96 | -- | -- | -- | -- | -- | -0.222 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 291.30 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 13 | 14 |
| 14 | 291.89 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 13 | 14 |
| 28 | 292.13 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 20 | 6 |
| 33 | 292.20 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 18 | 8 |
| 47 | 292.30 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 19 | 8 |
| 49 | 292.31 | humidity | 80.0 | 14400 | > th | dose dependent | sin | 15 | NA |
| 52 | 292.35 | humidity | 90.0 | 14400 | < th | dose independent | sin | 14 | NA |
| 72 | 292.53 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 20 | 5 |
| 82 | 292.61 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 21 | 4 |
| 87 | 292.66 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 21 | 3 |
| 93 | 292.70 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 22 | 1 |
| 130 | 293.03 | radiation | 40.0 | 14400 | < th | dose dependent | rect. | 18 | 11 |
| 142 | 293.17 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 13 | 18 |
| 143 | 293.19 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 13 | 14 |
| 148 | 293.22 | humidity | 90.0 | 720 | > th | dose independent | rect. | 6 | 20 |
| 168 | 293.32 | humidity | 70.0 | 43200 | > th | dose dependent | rect. | 17 | 1 |
| 172 | 293.35 | radiation | 30.0 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 198 | 293.44 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 14 | 4 |
| 200 | 293.44 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 14 | 4 |
| 209 | 293.47 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 14 | 4 |
| 219 | 293.53 | humidity | 50.0 | 1440 | > th | dose dependent | rect. | 14 | 17 |
| 240 | 293.64 | radiation | 40.0 | 14400 | < th | dose dependent | rect. | 18 | 9 |
| 246 | 293.69 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 17 | 10 |
| 261 | 293.76 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 14 | 6 |
| 269 | 293.79 | humidity | 50.0 | 1440 | > th | dose dependent | rect. | 14 | 14 |
| 277 | 293.81 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 21 | 5 |
| 297 | 293.87 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 19 | 8 |
| 306 | 293.90 | humidity | 90.0 | 14400 | > th | dose independent | sin | 14 | NA |
| 345 | 294.01 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 21 | 22 |
| 360 | 294.07 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 13 | 9 |
| 365 | 294.08 | radiation | 10.0 | 14400 | < th | dose dependent | rect. | 18 | 1 |
| 401 | 294.17 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 14 | 6 |
| 417 | 294.20 | humidity | 90.0 | 720 | < th | dose independent | rect. | 5 | 20 |
| 431 | 294.24 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 6 | 22 |
| 436 | 294.25 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 14 | 17 |
| 504 | 294.42 | humidity | 90.0 | 14400 | < th | dose independent | no | NA | NA |
| 521 | 294.44 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 17 | 23 |
| 527 | 294.45 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 15 | 13 |
| 533 | 294.47 | humidity | 50.0 | 1440 | > th | dose dependent | sin | 15 | NA |
| 563 | 294.55 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 15 | 2 |
| 571 | 294.57 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 5 | 23 |
| 572 | 294.58 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 13 | 9 |
| 609 | 294.64 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 6 | 1 |
| 621 | 294.67 | humidity | 80.0 | 14400 | > th | dose dependent | no | NA | NA |
| 625 | 294.68 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 17 | 23 |
| 658 | 294.78 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 20 | 23 |
| 664 | 294.80 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 16 | 1 |
| 669 | 294.81 | humidity | 80.0 | 720 | > th | dose dependent | rect. | 6 | 20 |
| 676 | 294.84 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 14 | 8 |
| 681 | 294.84 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 14 | 8 |
| 694 | 294.87 | humidity | 90.0 | 1440 | < th | dose dependent | sin | 14 | NA |
| 705 | 294.90 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 14 | 8 |
| 711 | 294.91 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 24 | 23 |
| 713 | 294.92 | humidity | 90.0 | 1440 | < th | dose independent | rect. | 6 | 15 |
| 715 | 294.92 | humidity | 90.0 | 1440 | < th | dose independent | rect. | 6 | 17 |
| 716 | 294.92 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 22 | 1 |
| 718 | 294.93 | wind | 9.0 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 813 | 295.11 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 22 | 22 |
| 895 | 295.28 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 19 | 1 |
| 913 | 295.32 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 17 | 23 |
| 945 | 295.38 | humidity | 60.0 | 43200 | > th | dose independent | rect. | 15 | 2 |
| 976 | 295.41 | humidity | 90.0 | 1440 | < th | dose independent | sin | 23 | NA |
| 981 | 295.42 | humidity | 90.0 | 14400 | > th | dose independent | no | NA | NA |
| 988 | 295.42 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 4 | 23 |