BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os08g0195800 Os08g0195800|Os08g0195800
(346 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os08g0195800 Cyclin-like F-box domain containing protein 627 e-180
Os08g0193900 Cyclin-like F-box domain containing protein 304 5e-83
Os08g0193600 Cyclin-like F-box domain containing protein 274 5e-74
Os02g0317300 Cyclin-like F-box domain containing protein 196 2e-50
Os08g0196200 Leucine-rich repeat 2 containing protein 189 2e-48
Os02g0317500 Cyclin-like F-box domain containing protein 186 3e-47
Os08g0193300 124 1e-28
Os08g0195900 117 1e-26
Os08g0194200 115 5e-26
Os08g0195200 112 3e-25
Os08g0191300 102 3e-22
Os08g0194000 100 2e-21
Os08g0195000 100 3e-21
Os08g0193200 Cyclin-like F-box domain containing protein 96 4e-20
Os11g0637300 Cyclin-like F-box domain containing protein 88 1e-17
Os08g0193500 Cyclin-like F-box domain containing protein 87 2e-17
Os08g0194100 82 4e-16
>Os08g0195800 Cyclin-like F-box domain containing protein
Length = 346
Score = 627 bits (1617), Expect = e-180, Method: Compositional matrix adjust.
Identities = 307/330 (93%), Positives = 307/330 (93%)
Query: 17 KKKEEEARDWADGLPLDAILAIFHKLGHADILMAADQVCATWRRAARDEPALWRRITVRG 76
KKKEEEARDWADGLPLDAILAIFHKLGHADILMAADQVCATWRRAARDEPALWRRITVRG
Sbjct: 17 KKKEEEARDWADGLPLDAILAIFHKLGHADILMAADQVCATWRRAARDEPALWRRITVRG 76
Query: 77 TEALSARINRGGLACAAVRRSAGQCEAFCGEYAGDDGFLVYLTEQASCLKSLRLISCLGV 136
TEALSARINRGGLACAAVRRSAGQCEAFCGEYAGDDGFLVYLTEQASCLKSLRLISCLGV
Sbjct: 77 TEALSARINRGGLACAAVRRSAGQCEAFCGEYAGDDGFLVYLTEQASCLKSLRLISCLGV 136
Query: 137 SNEGIEEATKEFPXXXXXXXSFCYNVTHEAYAAIGAACPQLKRFRLSKRSFYDSGGIRWK 196
SNEGIEEATKEFP SFCYNVTHEAYAAIGAACPQLKRFRLSKRSFYDSGGIRWK
Sbjct: 137 SNEGIEEATKEFPLLEELELSFCYNVTHEAYAAIGAACPQLKRFRLSKRSFYDSGGIRWK 196
Query: 197 NNDDAGGISKMHGLRSLQLFANNLTNEGLSTILDNCPNLESLDIRHCFNIDMGADSLRAK 256
NNDDAGGISKMHGLRSLQLFANNLTNEGLSTILDNCPNLESLDIRHCFNIDMGADSLRAK
Sbjct: 197 NNDDAGGISKMHGLRSLQLFANNLTNEGLSTILDNCPNLESLDIRHCFNIDMGADSLRAK 256
Query: 257 CSRIKMLRPPXXXXXXXXXXVYTPRRLPISPGFVRYYSVYSDPEYSMYSDEWTSEEFXXX 316
CSRIKMLRPP VYTPRRLPISPGFVRYYSVYSDPEYSMYSDEWTSEEF
Sbjct: 257 CSRIKMLRPPDDSTDDYDFDVYTPRRLPISPGFVRYYSVYSDPEYSMYSDEWTSEEFDDD 316
Query: 317 XXXYSGPSRYEEDLDKYDNALPRCMRTFLK 346
YSGPSRYEEDLDKYDNALPRCMRTFLK
Sbjct: 317 DDDYSGPSRYEEDLDKYDNALPRCMRTFLK 346
>Os08g0193900 Cyclin-like F-box domain containing protein
Length = 396
Score = 304 bits (779), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 170/315 (53%), Positives = 200/315 (63%), Gaps = 23/315 (7%)
Query: 19 KEEEARDWADGLPLDAILAIFHKLGHADILMAADQVCATWRRAARDEPALWRRITVRGTE 78
KE +ARDWA GLPLDAILAIFHKL H +ILM A QVC +WRRAARDEP LWRRI +RG
Sbjct: 84 KEGDARDWAGGLPLDAILAIFHKLDHIEILMGAGQVCRSWRRAARDEPQLWRRIDMRGHA 143
Query: 79 ALSARINRGGLACAAVRRSAGQCEAFCGEYAGDDGFLVYLTEQASCLKSLRLISCLGVSN 138
LS +N G+A AAVRRSAGQCEAF GEYA D+ L +L E+A +KSLRLISC + N
Sbjct: 144 DLSFELNLFGMAQAAVRRSAGQCEAFWGEYAADEKLLHFLGERAPSVKSLRLISCYDILN 203
Query: 139 EGIEEATKEFPXXXXXXXSFCYNVTH-EAYAAIGAACPQLKRFRLSKRSFYDSGGIRWKN 197
EG A K+FP S C N+ + +G ACPQLKRFR SK FY ++
Sbjct: 204 EGFSAAIKKFPLLEELELSLCSNIGESNVFEIVGKACPQLKRFRFSKDCFYSFEDNEYEM 263
Query: 198 NDDAGGISKMHGLRSLQLFANNLTNEGLSTILDNCPNLESLDIRHCFNIDMGADSLRAKC 257
+++A GI+ MH LRSLQLFANNL NEGL+ ILDNCP LESLDIRHCFN++M D+LRAKC
Sbjct: 264 DEEALGIATMHELRSLQLFANNLRNEGLAAILDNCPYLESLDIRHCFNVNMD-DTLRAKC 322
Query: 258 SRIKMLRPPXXXXXXXXXXVYTPRRLPISPGFVRYYS------VYSDPEYSMYSDEWTSE 311
+RIK LR P V P L +YS VY P+Y + SDE+
Sbjct: 323 ARIKTLRLPYDSTDDYDFQVQKPISL------ADFYSDSDDDCVYGGPDYILDSDEYDD- 375
Query: 312 EFXXXXXXYSGPSRY 326
Y P RY
Sbjct: 376 --------YCDPYRY 382
>Os08g0193600 Cyclin-like F-box domain containing protein
Length = 484
Score = 274 bits (701), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 163/356 (45%), Positives = 208/356 (58%), Gaps = 43/356 (12%)
Query: 25 DWADGLPLDAILAIFHKLGHADILMAADQVCATWRRAARDEPALWRRITVRGTEALSARI 84
DWA GLP +AILA+ KL H +ILM A QVC WRRAARD+P LWRRI + LS +
Sbjct: 138 DWAAGLPREAILAVLRKLDHMEILMGAGQVCRAWRRAARDDPQLWRRIDMLNHAELSFEL 197
Query: 85 NRGGLACAAVRRSAGQCEAFCGEYA-----------------------GDDGFLV-YLT- 119
N G+A AAVRRSAGQCEAF GEYA GD ++ +LT
Sbjct: 198 NLFGMAQAAVRRSAGQCEAFWGEYAPTKICSISSEIATIIYSQMTGLWGDAAMIIRFLTI 257
Query: 120 ---EQASCLKSLRLISCLGVSNEGIEEATKEFPXXXXXXXSFCYNV-THEAYAAIGAACP 175
++A CLKSLRLISC + +EG A K+FP + C N+ ++ + A+G ACP
Sbjct: 258 VYEKRAPCLKSLRLISCFDILDEGFSAAVKKFPLLEELELTLCDNLGENDVFKAVGKACP 317
Query: 176 QLKRFRLSKRSFYDSGGIRWKNNDDAGGISKMHGLRSLQLFANNLTNEGLSTILDNCPNL 235
QLKRFRLSKR FY+ + ++ A GI+ MH L SLQLFANNL+NEGL+ ILDNCP L
Sbjct: 318 QLKRFRLSKRCFYNYKHSGYNKDEQALGIATMHELSSLQLFANNLSNEGLTAILDNCPFL 377
Query: 236 ESLDIRHCFNIDMGADSLRAKCSRIKMLRPPXXXXXXXXXXVYTPRRLPISPG-----FV 290
ESLDIRHCFN+ M D+L+AKC+RIK LR P V+ PI G
Sbjct: 378 ESLDIRHCFNVSMD-DTLQAKCARIKTLRLPYDSTDDYDFQVHK----PIWSGADFFSDS 432
Query: 291 RYYSVYSDPEYSMYSDEWTSEEFXXXXXXYSGPSRYEEDLDKYDNALPRCMRTFLK 346
+Y P+Y + SDE+ +++ G YE++LD+ D + + M FLK
Sbjct: 433 DDDCIYGGPDYILDSDEY--DDYCDPYIYLDG--VYEDELDEEDRMMLKAMHMFLK 484
>Os02g0317300 Cyclin-like F-box domain containing protein
Length = 328
Score = 196 bits (498), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 113/251 (45%), Positives = 155/251 (61%), Gaps = 7/251 (2%)
Query: 20 EEEARDWADGLPLDAILAIFHKLGHADILMAADQVCATWRRAARDEPALWRRITVRGTEA 79
E E+RDWA+ +P DA+ A+F KL D+L+ A VC WRR A +P LWRR+ +
Sbjct: 16 EVESRDWAE-MPSDALAAVFGKLDVTDLLVGAGVVCRAWRRLAAIDPTLWRRVDMSHQGD 74
Query: 80 LSARINRGGLACAAVRRSAGQCEAFCGEYAGDDGFLVYLTEQASCLKSLRLISCLGVSNE 139
+ +A AAV R+AG EAF + DG L+Y++E+AS LKSL+L CL VSNE
Sbjct: 75 IMEVDEAVAMARAAVDRAAGTMEAFWADSFVTDGLLLYISERASSLKSLQLSMCLNVSNE 134
Query: 140 GIEEATKEFPXXXXXXXSFCYNVTHEAYAAIGAACPQLKRFRLSKRSF----YDSGGIRW 195
G+ EA K FP +FC ++ + A++G ACP+LK FRL++R Y + I
Sbjct: 135 GMAEAMKGFPRLEELDITFC-SLYGDVCASVGKACPELKCFRLNERYTLQMDYAAPDIMD 193
Query: 196 KNNDDAGGISKMHGLRSLQLFANNLTNEGLSTILDNCPNLESLDIRHCFNIDMGADSLRA 255
+ + G S M LR LQL N LTN+GL +ILD+C +LESLDIR C++I M D+L++
Sbjct: 194 DDTEALGIASNMPKLRELQLIGNKLTNDGLMSILDHCQHLESLDIRQCYSIQMD-DALKS 252
Query: 256 KCSRIKMLRPP 266
KCSRI L+ P
Sbjct: 253 KCSRISDLKLP 263
>Os08g0196200 Leucine-rich repeat 2 containing protein
Length = 265
Score = 189 bits (480), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 106/201 (52%), Positives = 133/201 (66%), Gaps = 10/201 (4%)
Query: 84 INRGGLACAAVRRSAGQCEAFCGEYAGDDGFLVYLTEQASCLKSLRLISCLGVSNEGIEE 143
+N G+A AAV+RSAG+CEAF GE AG D FL++L A LKSLRLISC VSN+G +
Sbjct: 13 VNLHGMAQAAVKRSAGRCEAFWGESAGSDRFLLFLGRAAPGLKSLRLISCYDVSNKGFGK 72
Query: 144 ATKEFPXXXXXXXSFCYNV-THEAYAAIGAACPQLKRFRLSKRSFY---DSGGIRWKNND 199
A K+FP S NV + + +G +CPQLKRFRLS+ F+ DS ++D
Sbjct: 73 AIKKFPLLEELELSLSPNVFGTDVFRTVGKSCPQLKRFRLSQHGFHSFEDS-----HDDD 127
Query: 200 DAGGISKMHGLRSLQLFANNLTNEGLSTILDNCPNLESLDIRHCFNIDMGADSLRAKCSR 259
+A GI+ M LRSLQ+F N +TNEGL ILDNCP+LESLDIRHCFN+ M D+LRAKC+R
Sbjct: 128 EALGIATMTQLRSLQIFGNTITNEGLEAILDNCPHLESLDIRHCFNVFMD-DTLRAKCAR 186
Query: 260 IKMLRPPXXXXXXXXXXVYTP 280
IK LR P V++P
Sbjct: 187 IKALRLPDDSIDDYDLQVFSP 207
>Os02g0317500 Cyclin-like F-box domain containing protein
Length = 330
Score = 186 bits (471), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 106/243 (43%), Positives = 149/243 (61%), Gaps = 8/243 (3%)
Query: 25 DWADGLPLDAILAIFHKLGHADILMAADQVCATWRRAARDEPALWRRITVRGTEALSARI 84
+WAD LP+DA+LA+F +LG A++LM A VC +W RAA EP LWRR+ + T +
Sbjct: 10 EWAD-LPVDAVLAVFERLGAAEVLMGAGVVCRSWLRAATREPRLWRRVDL--TACFDPTV 66
Query: 85 NRGGLACAAVRRSAGQCEAFCGEYAGDDGFLVYLTEQASCLKSLRLISCLGVSNEGIEEA 144
+ +A AAV R+ G+ E F E D L+Y+ ++ SCLKSLRL C+ +S +G+
Sbjct: 67 DMEAMARAAVDRAGGRLEHFAAERFVTDELLLYVAKRTSCLKSLRLRDCIKISEKGLVAV 126
Query: 145 TKEFPXXXXXXXSFCYNVTHEAYAAIGAACPQLKRFRLSKRSFYDSGGIRWKNNDDAGGI 204
K P + C A+G A P LK RL+ R ++D +++N A GI
Sbjct: 127 GKTSPCLEELELTTC--TISILLKAVGEAFPNLKCLRLNHR-WFDVQFDEFRDNFHALGI 183
Query: 205 S-KMHGLRSLQLFANNLTNEGLSTILDNCPNLESLDIRHCFNIDMGADSLRAKCSRIKML 263
+ MH LR LQ+FAN L N L+ ILDNCP+LESLD+R CFN+D+ A+ +RAKC+R+K +
Sbjct: 184 ACSMHRLRHLQIFANRLRNNALAAILDNCPHLESLDLRQCFNVDVDAE-VRAKCARLKDV 242
Query: 264 RPP 266
R P
Sbjct: 243 RFP 245
>Os08g0193300
Length = 333
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 88/270 (32%), Positives = 137/270 (50%), Gaps = 33/270 (12%)
Query: 24 RDWADGLPLDAILAIFHKLGHADILMAADQVCATWRRAARDEPALWRRITVRGTEALSAR 83
RDW++ LP+DA+ AIF KLG +ILM A VC +W AA P LWR + + + + ++
Sbjct: 15 RDWSE-LPVDALSAIFTKLGTVEILMGASFVCHSWL-AASKSPELWRFVDMTRHKVIFSK 72
Query: 84 INRGGLACA----AVRRSAGQCEAFCGEYAGDDGFLVYLTEQASCLKSLRLISCLGVSNE 139
R G+ CA A+ RS GQ E+F + L Y+ +AS LKS+RL++C + +
Sbjct: 73 --RTGILCAMAKAAIDRSDGQIESFWAQKFVTGELLDYIVRRASTLKSIRLVACTFIQWQ 130
Query: 140 GIEEATKEFPXXXXXXXSFCYNVTHEAYAAIGAACPQLKRFRLSKRSF------------ 187
+ + P S+ + + + + +G P LKR R+ F
Sbjct: 131 SLAMLAAKCPLLEEIECSY-HKMPADFFKCVGRVRPNLKRLRVHMHYFDQDELENELIKH 189
Query: 188 -YDSGGIRW---------KNNDDAGGISK-MHGLRSLQLFANNLTNEGLSTILDNCPNLE 236
+ GG + + N DA I++ MH LR LQ+ +NLT G+ ILD CP+LE
Sbjct: 190 VLEEGGEVFEEPFEQREARRNADAFAIAENMHELRLLQIAGHNLTEIGVRAILDGCPHLE 249
Query: 237 SLDIRHCFNIDMGADSLRAKCSRIKMLRPP 266
LD+ C +I + L+A+ + I+ +R P
Sbjct: 250 CLDLSSCHDIYVDGQ-LQARFAMIRHVRLP 278
>Os08g0195900
Length = 302
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 65/132 (49%), Positives = 79/132 (59%), Gaps = 6/132 (4%)
Query: 23 ARDWADGLPLDAILAIFHKLGHADILMAADQVCATWRRAARDEPALWRRITVRGTEAL-- 80
ARDWA+ LP+DAIL +F L H DILM A C +WR AARDEPALWRRI +RG L
Sbjct: 36 ARDWAE-LPVDAILQVFRWLDHVDILMGAGLACQSWRAAARDEPALWRRIDMRGFACLPY 94
Query: 81 ---SARINRGGLACAAVRRSAGQCEAFCGEYAGDDGFLVYLTEQASCLKSLRLISCLGVS 137
R +A AVRRS G+CE F + GDD L +L + A L+S+RL+ C VS
Sbjct: 95 WQRHRRDTVRAMAREAVRRSDGRCEEFWSKVGGDDEVLQFLADHAPYLRSIRLVKCDHVS 154
Query: 138 NEGIEEATKEFP 149
EGI + P
Sbjct: 155 KEGISAIIQSCP 166
>Os08g0194200
Length = 253
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 83/248 (33%), Positives = 120/248 (48%), Gaps = 46/248 (18%)
Query: 24 RDWADGLPLDAILAIFHKLGHADILMAADQVCATWRRAARDEPALWRRITVRGTEALSAR 83
RDW++ LP+D + +F KLG A+ILM A VC++W AA+ P LWR + +
Sbjct: 17 RDWSE-LPVDVLSVVFAKLGAAEILMGAGIVCSSWLHAAK-LPHLWRCVDIPQV------ 68
Query: 84 INRGGLACA----AVRRSAGQCEAFCGEYAGDDGFLVYLTEQASCLKSLRLISCLGVSNE 139
+ + CA AV RS + E F Y DD L Y+ ++ LKSL L SC VSN
Sbjct: 69 VRNDAVCCAMAKVAVDRSDERLEVFKAMYFVDDELLKYIGHRSPGLKSLCLDSCSMVSNT 128
Query: 140 GIEEATKEFPXXXXXXXSFCYNVTHEAYAAIGAACPQLKRFRLSKRSFYDSGGIRWKNN- 198
G+ + + A P L+ L GG+ +
Sbjct: 129 GLTQ--------------------------LMAMTPLLEDLVLR-------GGLDLSDEF 155
Query: 199 DDAGGISKMHGLRSLQLFANNLTNEGLSTILDNCPNLESLDIRHCFNIDMGADSLRAKCS 258
DD I MH LR + L + ++ + L+ +D+CP+LE LD C +D+ D+LRAKC+
Sbjct: 156 DDPLVIPTMHQLRQIALGSLYISRKTLTKFVDSCPHLELLDASECVAVDVVDDALRAKCA 215
Query: 259 RIKMLRPP 266
RIK L+ P
Sbjct: 216 RIKTLKLP 223
>Os08g0195200
Length = 261
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 79/258 (30%), Positives = 116/258 (44%), Gaps = 36/258 (13%)
Query: 17 KKKEEEARDWADGLPLDAILAIFHKLGHADILMAADQVCATWRRAARDEPALWRRITVRG 76
+K E RDW++ LPLDA+ +F KL R A P LWR + +
Sbjct: 23 EKLSPETRDWSE-LPLDALSVVFGKLP---------------RHRAAKLPHLWRCVDMSH 66
Query: 77 TEALSARINRGGLACAAVRRSAGQCEAFCGEYAGDDGFLVYLTEQASCLKSLRLISCLGV 136
+ +A AV RS G+ E F G+ + L Y+ +++ CLK L L SC V
Sbjct: 67 SHPRDVSRRNCAMAKVAVDRSGGKLEVFKGKRFVTNNLLTYVADRSPCLKCLYLESCTSV 126
Query: 137 SNEGIEEATKEFPXXXXXXXSFCYNVTHEAYAAIGAACPQLKRFRLSKRSFYDSGGIRW- 195
SN+G+ E + P C N+ + + G AC ++KR +RW
Sbjct: 127 SNKGLTELITKCPMLEDLTLYSCRNIDGDVFVVAGKACRRMKRLH-----------VRWC 175
Query: 196 ------KNNDDAGGISKMHGLRSLQLFANNLTNEGLSTILDNCPNLESLDIRHCFNIDMG 249
+ D+ GI+ M LR L L ++ E L I+D CP L+ L + C +
Sbjct: 176 GALPAYFDGDEPVGIATMRELRHLTLEGIGVSQEKLMAIVDGCPQLDLLHVSGCPGLAAV 235
Query: 250 ADSLRAKCSRIK--MLRP 265
D+L+AKC+ IK LRP
Sbjct: 236 DDALQAKCAGIKSLTLRP 253
>Os08g0191300
Length = 319
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/260 (30%), Positives = 126/260 (48%), Gaps = 28/260 (10%)
Query: 19 KEEEARDWADGLPLDAILAIFHKLGHADILMAADQVCATWRRAARDEPALWRRITVRGTE 78
++ RDW++ LP+DA+ +F KLG ++LM A VC W A + P LWR + + +
Sbjct: 10 EKTTTRDWSE-LPVDALSVVFAKLGAVEVLMGAGLVCRPWLDATK-LPHLWRCVDIAAMK 67
Query: 79 ALSARINRGGLACAAVRRSAGQCEAFCGEYAGDDGFLVYLTEQASCLKSLRLISCLGVSN 138
A + +A AV+R+ GQ EAF + L ++ + + LK L L SC V++
Sbjct: 68 KKRAVLCV--MADEAVKRADGQLEAFMAGAFVTNKLLKHVGDSSPTLKRLWLESCSLVTS 125
Query: 139 EGIEEATKEFPXXXXXXXSFCYNV------THEAYAAIGAACPQLKRFRLSKRSFYDSGG 192
G+ + P S+C V YAA+ ACP+L+R + + Y +
Sbjct: 126 NGLAQMIAMAPLLEELVLSYCRKVRGGGGGGGGVYAAVAEACPRLRRLEVRR---YPA-- 180
Query: 193 IRWKNNDDAG--------GISKMHGLRSLQLFA-NNLTNEGLSTILD-NCPNLESLDIRH 242
W+++D G GI+ M LR L L ++ L+ I+D CP+LE L +
Sbjct: 181 --WRDDDGGGDHHRRRPLGIAAMRELRHLTLVGVAGAGDDELAAIVDGGCPHLEVLHVSE 238
Query: 243 CFNI-DMGADSLRAKCSRIK 261
C + + +LR+KC +K
Sbjct: 239 CPGLAAVDVAALRSKCGGVK 258
>Os08g0194000
Length = 389
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/269 (30%), Positives = 124/269 (46%), Gaps = 47/269 (17%)
Query: 22 EARDWADGLPLDAILAIFHKLGHADILMAADQVCATWRRAARDEPALWRRITVRGTEALS 81
+ RDW++ LP+DA+ F K+G +ILM A VC +W AA+ P LWR + + + +
Sbjct: 40 DERDWSE-LPVDALSVFFAKIGAIEILMGAGLVCHSWLEAAK-VPDLWRSLDMTRHKVIF 97
Query: 82 ARINRGGLACA----AVRRSAGQCEAFCGEYAGDDGFLVYLTEQASCLKSLRLISCLGVS 137
+ G+ CA AV RSAG+ E+F + L Y+ E+ + LKS+RLI+ V
Sbjct: 98 KKTI--GVMCAMARVAVDRSAGKLESFWAQNFVTSDLLKYIGERTTSLKSIRLIAYTRVP 155
Query: 138 NEGIEEATKEFPXXXXXXXSFCYNVTHEAYAAIGAACPQLKRFRLSKRSF-YDS------ 190
+ + + P S+ + E + +G CPQL+ R++ F YD
Sbjct: 156 WKELVNLAAKSPLLEDLEHSY-RDSLEEFFEHLGCKCPQLRCLRVNNDGFVYDDAKYDLM 214
Query: 191 -------------------GGIRWKNNDDAGGIS---KMHGLRSLQLFANNLTNEGLSTI 228
G W +N++ + MH LR LQ+ N LTN G+ I
Sbjct: 215 DQVIGDHDDDDDEEDELEYGPWDWPSNNNGVAFAIAESMHELRILQITNNTLTNAGVLAI 274
Query: 229 LDNCPNLESLD--------IRHCFNIDMG 249
LD+C N+ D +RH FN+ G
Sbjct: 275 LDSCNNVSPNDQLRARWASLRH-FNLSEG 302
>Os08g0195000
Length = 250
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/164 (40%), Positives = 91/164 (55%), Gaps = 5/164 (3%)
Query: 22 EARDWADGLPLDAILAIFHKLGHADILMAADQVCATWRRAARDEPALWRRITVRGTEALS 81
E+RDW++ LP+DA IF KLG ++LM A VC +W AA+ P LW+ + + EALS
Sbjct: 9 ESRDWSE-LPMDAFSVIFAKLGAIELLMGAGLVCHSWLHAAK-LPHLWQCVEMVHHEALS 66
Query: 82 AR--INRGGLACAAVRRSAGQCEAFCGEYAGDDGFLVYLTEQASCLKSLRLISCLGVSNE 139
+ I +A AAV RS G+ EAF G++ +DG L Y+ +++ LK L L+SC V E
Sbjct: 67 LKEPIVMSEMARAAVDRSDGRLEAFEGQWFVNDGLLNYIRDRSPKLKRLCLVSCYSVYKE 126
Query: 140 GIEEATKEFPXXXXXXXSFCYNVTHEAYAAI-GAACPQLKRFRL 182
E + P C +V A I G + PQLKRF L
Sbjct: 127 AFIEFIAKCPLIEDIALINCGSVVFHALNVITGKSFPQLKRFEL 170
>Os08g0193200 Cyclin-like F-box domain containing protein
Length = 340
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 80/245 (32%), Positives = 116/245 (47%), Gaps = 42/245 (17%)
Query: 24 RDWADGLPLDAILAIFHKLGHADILMAADQVCATWRRAARDEPALWRRITV--------R 75
RDW+ LP+DA+ A+F KLG +ILM A VC +W AA P LWR + + +
Sbjct: 14 RDWSK-LPVDALSAVFMKLGTVEILMGASFVCHSW-LAASKSPELWRFVDMTRHKVIFSK 71
Query: 76 GTEALSARINRGGLACAAVRRSAGQCEAFCGEYAGDDGFLVYLTEQA-SCLKSLRLISCL 134
GT+ L A +A AA+ RS G+ E+F + L Y+ +A S LKS+RLI+C
Sbjct: 72 GTDILCA------MAKAAIDRSDGRMESFWAQKFVTCELLDYIVSRASSTLKSIRLIACT 125
Query: 135 GVSNEGIEEATKEFPXXXXXXXSFCYNVTHEAYAAIGAACPQLKRFRLSKRSF-YDSGGI 193
V + + P S + ++ + + +G PQLKR R+ F YD+
Sbjct: 126 FVWGQSLATLAARCPLLEEIECSH-HKMSADFFKYVGIVRPQLKRLRVHMPYFDYDAMED 184
Query: 194 RWKN----------------------NDDAGGISK-MHGLRSLQLFANNLTNEGLSTILD 230
K N DA I++ MH LR LQ+ NNLTN+G+S +
Sbjct: 185 EMKEHHNEDEDDDEYEEPFEQWEARRNVDAFAIAENMHELRLLQISGNNLTNKGVSELAA 244
Query: 231 NCPNL 235
N+
Sbjct: 245 QRSNM 249
>Os11g0637300 Cyclin-like F-box domain containing protein
Length = 252
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/250 (30%), Positives = 120/250 (48%), Gaps = 39/250 (15%)
Query: 24 RDWADGLPLDAILAIFHKLGHADILMAADQVCATWRRAARDEPALWRRI-----TVRGTE 78
RDW++ LP D + +F K+G ++L A C +W AAR P LWR + VR
Sbjct: 20 RDWSE-LPADVLSVVFAKVGAVEVLAGAGLACRSWLDAAR-VPELWRAVDMLRGAVRCLH 77
Query: 79 ALSARINRGGLACAAVRRSAGQCEAFCGEYAGDDGFLVYLTEQASCLKSLRLISCLGVSN 138
R +A AV RS G+ E F GE D L Y+ +++ SL++IS + S+
Sbjct: 78 LGQDRDLMCAMAKVAVDRSGGRLEVFKGEDFVSDELLEYIGDRS---PSLKVIS-VWCSD 133
Query: 139 EGIEEATKEFPXXXXXXXSFCYNVTHEAYAAIGAACPQLKRFRLSKRSFYDSGGIRWKNN 198
E ++ E +A + CP L+ LS SGG R
Sbjct: 134 E--------------------TRMSTEGFAELTRKCPLLEEIVLS------SGGHRRPPL 167
Query: 199 DD-AGGISKMHGLRSLQLFANNLTNEGLSTILDNCPNLESLDIRHCFNIDMGADS-LRAK 256
A ++++ LR L + ++N+ L+ I+D CP LE LD+ C+++ + D+ L AK
Sbjct: 168 PRLALAVAELRHLRRLTVQGIGVSNDELTAIVDGCPRLELLDVCSCWDLCVDDDAQLLAK 227
Query: 257 CSRIKMLRPP 266
C+RI+ L+ P
Sbjct: 228 CARIRTLKLP 237
>Os08g0193500 Cyclin-like F-box domain containing protein
Length = 447
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/167 (35%), Positives = 84/167 (50%), Gaps = 5/167 (2%)
Query: 23 ARDWADGLPLDAILAIFHKLGHADILMAADQVCATWRRAARDEPALWRRITV-RGTEALS 81
RDW+D LP DA+ IF KLG ++LM A VC +W AA+ P LWR + + R S
Sbjct: 13 VRDWSD-LPTDALSTIFMKLGSIEVLMGAGLVCHSWLAAAK-SPELWRSVDMTRHKVVFS 70
Query: 82 ARINRG-GLACAAVRRSAGQCEAFCGEYAGDDGFLVYLTEQASCLKSLRLISCLGVSNEG 140
I+ +A A+ RS G+ E+F + L Y+ +AS LKS+RLI+C
Sbjct: 71 KGIDTMCAMAKVAIDRSQGKMESFLAQKFVTSELLDYIACRASSLKSIRLIACRNFWEPS 130
Query: 141 IEEATKEFPXXXXXXXSFCYNVTHEAYAAIGAACPQLKRFRLSKRSF 187
+ E + P S ++ E +G A PQLKR ++ R F
Sbjct: 131 LAELATQCPLLEEIECS-GNKMSSEFLVYVGRARPQLKRLKIHMRWF 176
>Os08g0194100
Length = 284
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 95/207 (45%), Gaps = 32/207 (15%)
Query: 88 GLACAAVRRSAGQCEAFCGEYAGDDGFLVYLTEQASCLKSLRLISC---LGVSNEGIEEA 144
+A AV RS G+ E F G +D L Y+ +++ LK L LIS L +S + E
Sbjct: 51 AMAKVAVDRSDGRLEVFEGYGFVNDELLQYIGDRSPSLKGLSLISLFSYLDISKKVFTEF 110
Query: 145 TKEFPXXXXXXX------------SFCYNVTH-------------EAYAAIGAACPQLKR 179
+ P + VT E AI +C QLKR
Sbjct: 111 ISKCPCLEDLVVEEGGFIGGETGFTLSVEVTEMTEISVRNFQPCGEIVLAIAKSCTQLKR 170
Query: 180 FRLSKRSFYDSGGIRWKNNDDAGGISKMHGLRSLQLFANNLTNEGLSTILDNCPNLESLD 239
+L+ ++ DS G D+ GI+ M LR L L + + NE L I+D CP+LE LD
Sbjct: 171 LKLTVHTYPDSRGFFV---DEPFGIATMKQLRHLILGSICIGNEELMAIIDACPHLELLD 227
Query: 240 IRHCFNIDMGADSLRAKCSRIKMLRPP 266
+ C+ +D+ D+LR KC+ IK ++ P
Sbjct: 228 VSKCYKLDVD-DALRTKCAGIKTVKLP 253
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.321 0.136 0.426
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 11,223,637
Number of extensions: 445668
Number of successful extensions: 1533
Number of sequences better than 1.0e-10: 17
Number of HSP's gapped: 1492
Number of HSP's successfully gapped: 17
Length of query: 346
Length of database: 17,035,801
Length adjustment: 102
Effective length of query: 244
Effective length of database: 11,709,973
Effective search space: 2857233412
Effective search space used: 2857233412
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 156 (64.7 bits)