Os02g0757700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cyclin-like F-box domain containing protein.
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Os02g0757700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cyclin-like F-box domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 158.41 | 0.591 | 10.3 | -1.03 | 1.17 | -1.99 | 1.53 | 0.243 | -0.256 | 6.9 | 1.545 | 1456 | -- | -- |
| 157.85 | 0.585 | 10.3 | -0.981 | 1.16 | -2 | 1.57 | -- | -0.256 | 6.78 | 1.617 | 1463 | -- | -- |
| 163.65 | 0.596 | 10.3 | -0.999 | 1.17 | -1.93 | -- | 0.421 | -0.256 | 7.04 | 1.67 | 1457 | -- | -- |
| 163.77 | 0.596 | 10.3 | -0.951 | 1.17 | -1.96 | -- | -- | -0.257 | 7.09 | 1.61 | 1455 | -- | -- |
| 234.09 | 0.713 | 10.3 | -0.938 | -- | -2.08 | -- | 0.156 | -0.237 | -- | 1.661 | 1476 | -- | -- |
| 215.37 | 0.688 | 10.2 | -0.676 | 1.24 | -- | 1.44 | -- | 0.029 | 7.06 | -- | -- | -- | -- |
| 220.47 | 0.695 | 10.2 | -0.645 | 1.24 | -- | -- | -- | 0.0272 | 7.29 | -- | -- | -- | -- |
| 234.04 | 0.713 | 10.3 | -0.942 | -- | -2.18 | -- | -- | -0.257 | -- | 1.64 | 1475 | -- | -- |
| 186.85 | 0.637 | 10.2 | -- | 1.2 | -1.67 | -- | -- | -0.155 | 7.39 | 1.677 | 1445 | -- | -- |
| 301.85 | 0.812 | 10.2 | -0.623 | -- | -- | -- | -- | 0.0481 | -- | -- | -- | -- | -- |
| 231.42 | 0.712 | 10.2 | -- | 1.23 | -- | -- | -- | 0.099 | 7.32 | -- | -- | -- | -- |
| 256.72 | 0.746 | 10.3 | -- | -- | -1.91 | -- | -- | -0.154 | -- | 1.77 | 1476 | -- | -- |
| 312.1 | 0.825 | 10.2 | -- | -- | -- | -- | -- | 0.117 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 150.20 | humidity | 50 | 720 | > th | dose dependent | rect. | 16 | 8 |
| 3 | 150.64 | humidity | 90 | 720 | < th | dose dependent | rect. | 18 | 3 |
| 5 | 150.81 | humidity | 90 | 720 | < th | dose dependent | rect. | 18 | 5 |
| 6 | 150.85 | temperature | 25 | 720 | > th | dose dependent | rect. | 18 | 5 |
| 27 | 153.43 | humidity | 70 | 720 | < th | dose independent | rect. | 18 | 13 |
| 30 | 153.53 | humidity | 70 | 720 | < th | dose independent | rect. | 18 | 2 |
| 50 | 154.49 | humidity | 70 | 720 | > th | dose independent | rect. | 16 | 10 |
| 76 | 155.83 | humidity | 50 | 1440 | > th | dose dependent | rect. | 13 | 10 |
| 80 | 155.89 | humidity | 90 | 1440 | < th | dose dependent | rect. | 16 | 1 |
| 85 | 155.98 | humidity | 70 | 720 | > th | dose independent | sin | 13 | NA |
| 92 | 156.10 | humidity | 50 | 1440 | > th | dose dependent | rect. | 13 | 6 |
| 101 | 156.31 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 19 |
| 115 | 156.60 | humidity | 80 | 1440 | < th | dose independent | rect. | 6 | 11 |
| 120 | 156.68 | humidity | 50 | 1440 | > th | dose dependent | rect. | 16 | 1 |
| 124 | 156.77 | humidity | 50 | 1440 | > th | dose dependent | rect. | 15 | 3 |
| 132 | 156.84 | humidity | 80 | 1440 | > th | dose independent | rect. | 6 | 11 |
| 141 | 157.05 | humidity | 90 | 1440 | < th | dose dependent | rect. | 15 | 3 |
| 144 | 157.09 | humidity | 90 | 1440 | < th | dose dependent | rect. | 13 | 8 |
| 145 | 157.10 | humidity | 50 | 1440 | > th | dose dependent | sin | 19 | NA |
| 158 | 157.23 | humidity | 90 | 1440 | < th | dose dependent | rect. | 13 | 6 |
| 179 | 157.48 | radiation | 1 | 1440 | > th | dose independent | rect. | 11 | 19 |
| 240 | 158.13 | humidity | 70 | 720 | > th | dose dependent | rect. | 19 | 2 |
| 262 | 158.33 | humidity | 80 | 1440 | < th | dose independent | sin | 1 | NA |
| 264 | 158.34 | humidity | 50 | 1440 | > th | dose dependent | rect. | 6 | 17 |
| 269 | 158.39 | humidity | 80 | 1440 | > th | dose independent | sin | 0 | NA |
| 290 | 158.52 | humidity | 90 | 1440 | < th | dose dependent | sin | 20 | NA |
| 354 | 158.91 | humidity | 90 | 1440 | < th | dose dependent | rect. | 4 | 18 |
| 442 | 159.33 | humidity | 70 | 720 | > th | dose independent | rect. | 16 | 16 |
| 524 | 159.74 | humidity | 50 | 1440 | > th | dose dependent | rect. | 11 | 20 |
| 531 | 159.78 | humidity | 80 | 1440 | < th | dose dependent | rect. | 13 | 19 |
| 581 | 160.03 | radiation | 1 | 1440 | < th | dose independent | sin | 14 | NA |
| 603 | 160.14 | temperature | 30 | 720 | > th | dose independent | rect. | 18 | 1 |
| 675 | 160.34 | humidity | 80 | 1440 | < th | dose dependent | rect. | 13 | 16 |
| 874 | 161.02 | radiation | 1 | 1440 | < th | dose dependent | rect. | 11 | 19 |
| 903 | 161.16 | humidity | 70 | 720 | > th | dose independent | rect. | 16 | 4 |
| 948 | 161.35 | radiation | 1 | 1440 | > th | dose independent | sin | 14 | NA |
| 998 | 161.52 | radiation | 10 | 1440 | < th | dose dependent | sin | 15 | NA |