BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os08g0171800 Os08g0171800|AK068909
(315 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os08g0171800 Protein of unknown function DUF617, plant fami... 486 e-137
Os04g0638800 Protein of unknown function DUF617, plant fami... 199 2e-51
Os01g0806400 Protein of unknown function DUF617, plant fami... 160 1e-39
Os08g0476600 Protein of unknown function DUF617, plant fami... 139 3e-33
Os01g0268700 134 1e-31
Os05g0577100 Protein of unknown function DUF617, plant fami... 133 2e-31
Os09g0463600 Protein of unknown function DUF617, plant fami... 132 4e-31
Os01g0642600 Protein of unknown function DUF617, plant fami... 119 2e-27
Os02g0709600 Protein of unknown function DUF617, plant fami... 100 1e-21
Os05g0280150 83 2e-16
Os03g0733266 72 5e-13
>Os08g0171800 Protein of unknown function DUF617, plant family protein
Length = 315
Score = 486 bits (1250), Expect = e-137, Method: Compositional matrix adjust.
Identities = 254/315 (80%), Positives = 254/315 (80%)
Query: 1 MGGFAPHPVVVPTAAMDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGSTLELPSRKHY 60
MGGFAPHPVVVPTAAMD AGSTLELPSRKHY
Sbjct: 1 MGGFAPHPVVVPTAAMDGTSSVSARTASSLSSSSSSLDDGGRGRPPPAGSTLELPSRKHY 60
Query: 61 RYPSRSARLFQKLRRSLPLLTLAPRCGRMQVXXXXXXXXXXXXXXXXXXXXDSHLMSHVV 120
RYPSRSARLFQKLRRSLPLLTLAPRCGRMQV DSHLMSHVV
Sbjct: 61 RYPSRSARLFQKLRRSLPLLTLAPRCGRMQVGSASEVAAAAASGGGGGGAADSHLMSHVV 120
Query: 121 SSFSGAARPMRRVTGTLFGHRKGRVALALQETPRCLPTLVIELAIQTNALLRELANPAGA 180
SSFSGAARPMRRVTGTLFGHRKGRVALALQETPRCLPTLVIELAIQTNALLRELANPAGA
Sbjct: 121 SSFSGAARPMRRVTGTLFGHRKGRVALALQETPRCLPTLVIELAIQTNALLRELANPAGA 180
Query: 181 RIVLETERRAPSTDAAAGKHRRAPPLLDVAAWTMFCNGRKTGLAVRREATDDDLAVLETL 240
RIVLETERRAPSTDAAAGKHRRAPPLLDVAAWTMFCNGRKTGLAVRREATDDDLAVLETL
Sbjct: 181 RIVLETERRAPSTDAAAGKHRRAPPLLDVAAWTMFCNGRKTGLAVRREATDDDLAVLETL 240
Query: 241 RPVSMGAGVLPAXXXXXXXXXXXPEKGAAAADDEVAYMRGCFDHFVGSRDSESLYMIAPQ 300
RPVSMGAGVLPA PEKGAAAADDEVAYMRGCFDHFVGSRDSESLYMIAPQ
Sbjct: 241 RPVSMGAGVLPASNRSSSSSSQSPEKGAAAADDEVAYMRGCFDHFVGSRDSESLYMIAPQ 300
Query: 301 GGGTGPELAIFFVRL 315
GGGTGPELAIFFVRL
Sbjct: 301 GGGTGPELAIFFVRL 315
>Os04g0638800 Protein of unknown function DUF617, plant family protein
Length = 301
Score = 199 bits (507), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 124/257 (48%), Positives = 157/257 (61%), Gaps = 30/257 (11%)
Query: 69 LFQKLRRSLPLLTLAPRCGRMQVXXXXXXXXXXXXXXXXXXXXDSHLMSHVVSSFSGAAR 128
+F + RSLP+LT P CGR+Q + LMS +V+S S A
Sbjct: 65 MFHTMCRSLPVLT--PGCGRLQ-----PAGAACRIAAPSRLSPSASLMSKLVASASTGAA 117
Query: 129 PM--RRVTGTLFGHRKGRVALALQETPRCLPTLVIELAIQTNALLRELANPAGARIVLET 186
RR+TGTLFG+R R+AL+LQ+ PRC PTLV+ELA+ T+ALLR+L AGARIVLE+
Sbjct: 118 GASRRRMTGTLFGYRDARIALSLQDNPRCQPTLVVELALPTHALLRDLGTTAGARIVLES 177
Query: 187 ERRAPSTDAAAG--------KHRRAPPLLDVAAWTMFCNGRKTGLAVRREATDDDLAVLE 238
E+RA AG + ++ +L+ + WTM CNG+K G AVRR+ TDDD+AVLE
Sbjct: 178 EKRAADGGDGAGAGASSRREREQQDGWVLEESMWTMSCNGKKVGYAVRRDPTDDDIAVLE 237
Query: 239 TLRPVSMGAGVLPAXXXXXXXXXXXPEKGAAAADDEVAYMRGCFDHFVGSRDSESLYMIA 298
TL VSMG GVLP D E+AYMRG F+H +GSR+SESLYMI+
Sbjct: 238 TLWAVSMGGGVLPGISDMD------------GKDGEMAYMRGSFEHIIGSRNSESLYMIS 285
Query: 299 PQGGGTGPELAIFFVRL 315
P GG PELA+FFVRL
Sbjct: 286 PHGGDC-PELAVFFVRL 301
>Os01g0806400 Protein of unknown function DUF617, plant family protein
Length = 272
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 90/185 (48%), Positives = 116/185 (62%), Gaps = 14/185 (7%)
Query: 132 RVTGTLFGHRKGRVALALQETPRCLPTLVIELAIQTNALLRELANPAGARIVLETERRAP 191
R TGTLFG+RK RV LA+QETP +P L++ELA+QT ++E+ R+ LE E++ P
Sbjct: 101 RTTGTLFGYRKARVTLAVQETPGSVPILLLELAMQTGRFMQEMGAEH-LRVALECEKKPP 159
Query: 192 STDAAAGKHRRAPPLLDVAAWTMFCNGRKTGLAVRREATDDDLAVLETLRPVSMGAGVLP 251
A G+ R LLD WT + NGRK G A+RRE T+ DL V++ LR VS+GAGVLP
Sbjct: 160 GAGAGIGRTR----LLDEPLWTAYVNGRKIGYAMRREPTEGDLTVMQLLRTVSVGAGVLP 215
Query: 252 AXXXXXXXXXXXPEKGAAAAD-DEVAYMRGCFDHFVGSRDSESLYMIAPQGGGTGPELAI 310
+ GA D ++AYMR FD VGSRDSES YM+ P G GPEL+I
Sbjct: 216 TDVMGG-------DAGAEVQDAGDLAYMRARFDRVVGSRDSESFYMLNPD-GNNGPELSI 267
Query: 311 FFVRL 315
FF+R+
Sbjct: 268 FFIRI 272
>Os08g0476600 Protein of unknown function DUF617, plant family protein
Length = 1589
Score = 139 bits (349), Expect = 3e-33, Method: Composition-based stats.
Identities = 83/193 (43%), Positives = 108/193 (55%), Gaps = 32/193 (16%)
Query: 134 TGTLFGHRKGRVALALQETPRCLPTLVIELAIQTNALLRELANPAGARIVLETERRAPST 193
T TLFGHR+GR++LA+ E R P +IEL + +A+ RE+A ++ LE++ R+
Sbjct: 80 TVTLFGHRRGRLSLAIHEDTRAPPAFLIELPMLASAMHREMAT-GTVKLALESDTRS--- 135
Query: 194 DAAAGKHRRAPPLLDVAAWTMFCNGRKTGLAVRR-EATDDDLAVLETLRPVSMGAGVLPA 252
RR LL+ W +FCNGRK G A+RR +A+DDD VL LR VSMGAGVLP
Sbjct: 136 -----ARRR---LLEEYVWAVFCNGRKAGYAIRRKDASDDDRHVLRLLRGVSMGAGVLPP 187
Query: 253 XXXXXXXXXXXPEKGAAAADDEVAYMRGCFDHFVGSRDSESLYMIAP-----QGGGTG-- 305
+G A D E+ YMR + VGS+DSE+ YMI P GG G
Sbjct: 188 PPAD--------RRGGAGPDGELTYMRARVERVVGSKDSEAFYMINPDDGSDNGGAAGRD 239
Query: 306 ----PELAIFFVR 314
PEL+IF VR
Sbjct: 240 RECAPELSIFLVR 252
>Os01g0268700
Length = 543
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 88/260 (33%), Positives = 126/260 (48%), Gaps = 29/260 (11%)
Query: 58 KHYRYPSRSARLFQKLRRSLPLLTLAPRCGRMQVXXXXXXXXXXXXXXXXXXXXDSHLMS 117
KH+ P+R R + RS P+L AP C +
Sbjct: 309 KHWSRPARFVRSVRAAFRSFPILP-APSCRGLP------------SLPHLPGLHHGGAGG 355
Query: 118 HVVSSFSGAARPMRRVTGTLFGHRKGRVALALQETPRCLPTLVIELAIQTNALLRELANP 177
V + F G+ R TGTL+GHR+ R+ +A ++P P L++++A+ T +++++
Sbjct: 356 AVRNHFHGSTR----TTGTLYGHRRARITIAFHDSPGSPPALLLDIAVPTAKFIQDVSAA 411
Query: 178 AGARIVLETERRAPSTDAAAGKHRRAPP---LLDVAAWTMFCNGRKTGLAVRREATDDDL 234
R+ LE +++ A P LLD W+ NG G A RREAT+ D
Sbjct: 412 GMVRVTLECDKQQHQPPPHAHPPGDPLPPRRLLDEPVWSAEVNGESVGYAARREATEADE 471
Query: 235 AVLETLRPVSMGAGVLPAXXXXXXXXXXXPEKGAAAADDEVAYMRGCFDHFVGSRDSESL 294
V+ L +SMGAGVLPA + +AAD EV YMR FD VGS+D+E+
Sbjct: 472 RVMRLLHAMSMGAGVLPAVAA---------DAPTSAADGEVTYMRAHFDRVVGSKDAETY 522
Query: 295 YMIAPQGGGTGPELAIFFVR 314
YM P+G TGPEL IFF+R
Sbjct: 523 YMHNPEGCATGPELTIFFIR 542
>Os05g0577100 Protein of unknown function DUF617, plant family protein
Length = 297
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 83/195 (42%), Positives = 107/195 (54%), Gaps = 28/195 (14%)
Query: 132 RVTGTLFGHRKGRVALALQETPRCLPTLVIELAIQTNALLRELANPAGARIVLETERR-- 189
R+TGTL+GHR+G V LA Q PR P L++ELA T AL+RE+A+ RI LE ER
Sbjct: 120 RLTGTLYGHRRGHVHLAFQLDPRACPALLLELAAPTAALVREMASGL-VRIALECERAKG 178
Query: 190 --APSTDAAAGKHRRAPPLLDVAAWTMFCNGRKTGLAVRREATDDDLAVLETLRPVSMGA 247
AP+ A G +R LL+ W +CNG+ G AVRRE D VL L PVSMGA
Sbjct: 179 GPAPALPTATGGGKR---LLEETVWRAYCNGKSCGYAVRRECGAADWRVLRALEPVSMGA 235
Query: 248 GVLPAXXXXXXXXXXXPEKGAAAADDEVAYMRGCFDHFVGSRDSESLYMIAPQ------- 300
GV+PA + +V YMR F+ VGSRDSE+ YM+ P
Sbjct: 236 GVIPAAS-------------CGGGEGDVMYMRARFERVVGSRDSEAFYMMNPDSTSTSSN 282
Query: 301 GGGTGPELAIFFVRL 315
GPEL+++ +R+
Sbjct: 283 SNSGGPELSVYLLRV 297
>Os09g0463600 Protein of unknown function DUF617, plant family protein
Length = 244
Score = 132 bits (331), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 83/195 (42%), Positives = 113/195 (57%), Gaps = 35/195 (17%)
Query: 134 TGTLFGHRKGRVALALQETPRCLPTLVIELAIQTNALLRELANPAGARIVLETERRAPST 193
T TLFGHR+GRV+LA+ E R P +IEL + T+AL +E+++ ++ LE++ R+
Sbjct: 71 TVTLFGHRRGRVSLAIHEDTRAPPVFLIELPMLTSALHKEISSGV-VKLALESDTRS--- 126
Query: 194 DAAAGKHRRAPPLLDVAAWTMFCNGRKTGLAVRR-EATDDDLAVLETLRPVSMGAGVLPA 252
RR L++ W ++CNGRK G ++RR EA+DD+ VL LR VSMGAGVLPA
Sbjct: 127 -----ARRR---LVEEYVWAVYCNGRKAGYSIRRKEASDDERHVLRLLRGVSMGAGVLPA 178
Query: 253 XXXXXXXXXXXPEKGA---AAADDEVAYMRGCFDHFVGSRDSESLYMIAPQGGGTG---- 305
PEK A D E+ Y+R + VGS+DSE+ YMI P GG G
Sbjct: 179 ----------APEKEGGVPAGPDGELTYVRARVERVVGSKDSEAFYMINPNEGGVGGDSA 228
Query: 306 -----PELAIFFVRL 315
PEL+IF VR+
Sbjct: 229 GDGSAPELSIFLVRM 243
>Os01g0642600 Protein of unknown function DUF617, plant family protein
Length = 303
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/205 (38%), Positives = 106/205 (51%), Gaps = 36/205 (17%)
Query: 132 RVTGTLFGHRKGRVALALQETPRCLPTLVIELAIQTNALLRELANPAGARIVLETER--- 188
R+TGTL+GHR+G V LA Q PR P L++ELA T +L+RE+A+ RI LE ER
Sbjct: 114 RLTGTLYGHRRGHVHLAFQVDPRACPALLLELAAPTASLVREMASGL-VRIALECERAKG 172
Query: 189 ------------RAPSTDAAAGKHRRAPPLLDVAAWTMFCNGRKTGLAVRREATDDDLAV 236
+ S+ +++ L++ W +CNGR G AVRRE D V
Sbjct: 173 GGACAFPTAAAAPSSSSSSSSSSSAGGRKLVEETVWRAYCNGRSCGYAVRRECGAADWRV 232
Query: 237 LETLRPVSMGAGVLPAXXXXXXXXXXXPEKGAAAADDEVAYMRGCFDHFVGSRDSESLYM 296
L L PVSMGAGV+PA + +V YMR F+ VGSRDSE+ YM
Sbjct: 233 LRALEPVSMGAGVIPAA--------------CGGGEGDVMYMRARFERVVGSRDSEAFYM 278
Query: 297 IAPQ------GGGTGPELAIFFVRL 315
+ P GPEL+++ +R+
Sbjct: 279 MNPDCGGSGSNNNGGPELSVYLLRV 303
>Os02g0709600 Protein of unknown function DUF617, plant family protein
Length = 247
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/152 (42%), Positives = 89/152 (58%), Gaps = 18/152 (11%)
Query: 164 AIQTNALLRELANPAGARIVLETERRAPSTDAAAGKHRRAPPLLDVAAWTMFCNGRKTGL 223
A T AL+RE+++ R+ LE E++ + G+ RRA LL+ W +CNGRK G
Sbjct: 114 AYSTGALVREMSS-GLVRLALECEKQPINP----GEKRRA--LLEEPTWRAYCNGRKCGF 166
Query: 224 AVRREATDDDLAVLETLRPVSMGAGVLPAXXXXXXXXXXXPEKGAAAADDEVAYMRGCFD 283
AVRRE D+ VL + PVS+GAGVLP AAA + ++ YMR F+
Sbjct: 167 AVRRECGADEWRVLGAVEPVSVGAGVLPDDAAAA----------AAAEEGDLMYMRARFE 216
Query: 284 HFVGSRDSESLYMIAPQGGGTGPELAIFFVRL 315
VGSRDSE+ YM+ P G G GPEL+I+ +R+
Sbjct: 217 RVVGSRDSEAFYMMNPDGSG-GPELSIYLLRV 247
>Os05g0280150
Length = 412
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 86/195 (44%), Gaps = 31/195 (15%)
Query: 133 VTGTLFGHRKGRVALALQETPRCLPTLVIELAI--------QTNALLR---ELANPAGAR 181
+ GT+FG R G V +Q P + EL++ + LLR E + +G
Sbjct: 83 IVGTIFGRRSGHVTFCVQRDAAMPPPFLFELSVPMLSLAAEMGSGLLRIALECHHSSGKV 142
Query: 182 IVLETERRAPSTDAAAGKHRRAPPLLDVAAWTMFCNGRKTGLAVRREATDDDLAVLETLR 241
+V + + G R+ W CNGR G AVRR TD D VLE++R
Sbjct: 143 VVGAADGDTINNAGTGGGGSRS-------VWKASCNGRDVGYAVRRRPTDQDCRVLESMR 195
Query: 242 PVSMGAGVLPAXXXXXXXXXXXPEKGAAAADDEVAYMRGCFDHFVGSRDSESLYMIAPQG 301
+ G GVLP+ E G +V YMR ++ VGS+D+ S ++I P
Sbjct: 196 MTTTGVGVLPSTGFS--------EDGGGG---DVLYMRATYERVVGSKDAVSYHLITPGT 244
Query: 302 GGTGP--ELAIFFVR 314
P EL++F +R
Sbjct: 245 ASGSPQQELSVFLLR 259
>Os03g0733266
Length = 231
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/142 (38%), Positives = 73/142 (51%), Gaps = 32/142 (22%)
Query: 178 AGARIVLETERRAPSTDAAAGKHRRAPPLLDVAAWTMFCNGRKTGLAVRR-EATDDDLAV 236
A R+VLE +R+ + A LL+ A W ++CNGR+ G A RR EA+D + V
Sbjct: 118 AAGRVVLECQRQWNNGGGA---------LLESAKWLVYCNGRRVGFAARRGEASDAEGWV 168
Query: 237 LETLRPVSMGAGVLPAXXXXXXXXXXXPEKGAAAADDEVAYMRGCFDHFVGSRDSESLYM 296
LE L V+ GAG LP GA V YMRG F+ V S D+ES ++
Sbjct: 169 LEKLWAVTAGAGRLPG--------------GAG-----VEYMRGRFERTVASSDAESFHL 209
Query: 297 IAPQG--GGTGPE-LAIFFVRL 315
+ P G G G + L+IFF R+
Sbjct: 210 VDPIGWLGFNGNDGLSIFFHRI 231
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.322 0.136 0.404
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 9,606,656
Number of extensions: 355526
Number of successful extensions: 830
Number of sequences better than 1.0e-10: 11
Number of HSP's gapped: 804
Number of HSP's successfully gapped: 11
Length of query: 315
Length of database: 17,035,801
Length adjustment: 101
Effective length of query: 214
Effective length of database: 11,762,187
Effective search space: 2517108018
Effective search space used: 2517108018
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 156 (64.7 bits)