BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os07g0623100 Os07g0623100|AK108461
(281 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os07g0623100 Similar to ER66 protein (Fragment) 518 e-147
Os03g0388500 Similar to Anther ethylene-upregulated protein... 302 2e-82
Os03g0191000 Similar to CG-1 protein (Fragment) 249 1e-66
Os10g0375600 Similar to ER66 protein (Fragment) 237 9e-63
Os01g0923600 CG-1 domain containing protein 92 5e-19
Os07g0490200 Similar to Ankyrin repeat-rich membrane-spanni... 82 3e-16
Os04g0388500 CG-1 domain containing protein 78 8e-15
>Os07g0623100 Similar to ER66 protein (Fragment)
Length = 281
Score = 518 bits (1333), Expect = e-147, Method: Compositional matrix adjust.
Identities = 257/281 (91%), Positives = 257/281 (91%)
Query: 1 EICGLGGAEDFAESSSAQLAYRDSQAESLKDSLSAVRKSTQAAARIFQAFRVESFHRKKV 60
EICGLGGAEDFAESSSAQLAYRDSQAESLKDSLSAVRKSTQAAARIFQAFRVESFHRKKV
Sbjct: 1 EICGLGGAEDFAESSSAQLAYRDSQAESLKDSLSAVRKSTQAAARIFQAFRVESFHRKKV 60
Query: 61 VEYGDDDCGLSDERTLSLVSIKNAKPGQNDGSHSAAVRIQNKFRGWKGRKEFMIIRQKIV 120
VEYGDDDCGLSDERTLSLVSIKNAKPGQNDGSHSAAVRIQNKFRGWKGRKEFMIIRQKIV
Sbjct: 61 VEYGDDDCGLSDERTLSLVSIKNAKPGQNDGSHSAAVRIQNKFRGWKGRKEFMIIRQKIV 120
Query: 121 KIQAHVRGHQVRKSYRRIVWSVGIVEXXXXXXXXXXXXXXXFQPVKQLEGPSPIQQLEGP 180
KIQAHVRGHQVRKSYRRIVWSVGIVE FQPVKQLEGPSPIQQLEGP
Sbjct: 121 KIQAHVRGHQVRKSYRRIVWSVGIVEKIILRWRRKRRGLRGFQPVKQLEGPSPIQQLEGP 180
Query: 181 SQIQPAKXXXXXXXXXLKDGRKQAEGRLQRALARVKSMTQYPEAREQYSRIANRVTELQE 240
SQIQPAK LKDGRKQAEGRLQRALARVKSMTQYPEAREQYSRIANRVTELQE
Sbjct: 181 SQIQPAKEEEEDEYDYLKDGRKQAEGRLQRALARVKSMTQYPEAREQYSRIANRVTELQE 240
Query: 241 PQAMMIQDDMQSDGAIADGGDFMAELEELCGDGDAPMPTIL 281
PQAMMIQDDMQSDGAIADGGDFMAELEELCGDGDAPMPTIL
Sbjct: 241 PQAMMIQDDMQSDGAIADGGDFMAELEELCGDGDAPMPTIL 281
>Os03g0388500 Similar to Anther ethylene-upregulated protein ER1 (Fragment)
Length = 297
Score = 302 bits (773), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 159/241 (65%), Positives = 179/241 (74%), Gaps = 12/241 (4%)
Query: 1 EICGLGGAEDFAESSSAQLAYRDSQAESLKDSLSAVRKSTQAAARIFQAFRVESFHRKKV 60
E C L ED E + QLA +DS AESLKDSLSAVRKS QAAARIFQAFRVESFHRKKV
Sbjct: 65 EACRLTIPEDLPEMNYGQLAVQDSHAESLKDSLSAVRKSAQAAARIFQAFRVESFHRKKV 124
Query: 61 VEYGDDDCGLSDERTLSLVSIKNAKPGQNDGS-HSAAVRIQNKFRGWKGRKEFMIIRQKI 119
VEYGDDDCGLSDE T SL+S++ K GQ+D HSAAVRIQNKFRGWKGRKEFMIIRQ+I
Sbjct: 125 VEYGDDDCGLSDEHTFSLISLQKVKQGQHDTRLHSAAVRIQNKFRGWKGRKEFMIIRQRI 184
Query: 120 VKIQAHVRGHQVRKSYRRIVWSVGIVEXXXXXXXXXXXXXXXFQPVKQLEGPSPIQQLEG 179
VK+QAHVRGHQVRK+Y+++VWSVGIVE F+P K QLEG
Sbjct: 185 VKLQAHVRGHQVRKNYKKVVWSVGIVEKVILRWRRKGRGLRGFRPEK---------QLEG 235
Query: 180 PSQIQPAKXXXXXXXXXLKDGRKQAEGRLQRALARVKSMTQYPEAREQYSRIANRVTELQ 239
+QIQPAK L+DGR+QAEGRLQRAL RV+SMTQYPEAREQY R+ V E+Q
Sbjct: 236 QTQIQPAK--TEDEYDYLQDGRRQAEGRLQRALDRVRSMTQYPEAREQYRRLTTCVAEMQ 293
Query: 240 E 240
+
Sbjct: 294 Q 294
>Os03g0191000 Similar to CG-1 protein (Fragment)
Length = 1029
Score = 249 bits (637), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 142/278 (51%), Positives = 181/278 (65%), Gaps = 7/278 (2%)
Query: 1 EICGLGGAEDFAESSSAQLAYRDSQAESLKDSLSAVRKSTQAAARIFQAFRVESFHRKKV 60
EI GL G + A+ S++ LA Q S+ DSL AVR + QAAARI+Q FR++SF RK+
Sbjct: 756 EISGLPGIVNVADRSASPLAVEGHQTGSMGDSLGAVRNAAQAAARIYQVFRMQSFQRKQA 815
Query: 61 VEYGDDDCGLSDERTLSLVSIKNAKPGQNDGSHSAAVRIQNKFRGWKGRKEFMIIRQKIV 120
V+Y D++ +SDER +SL+S K +KP Q D H+AA RIQNKFRGWKGRKEF++IRQ+IV
Sbjct: 816 VQYEDENGAISDERAMSLLSAKPSKPAQLDPLHAAATRIQNKFRGWKGRKEFLLIRQRIV 875
Query: 121 KIQAHVRGHQVRKSYRRIVWSVGIVEXXXXXXXXXXXXXXXFQPVKQLEGPSPIQQLEGP 180
KIQAHVRGHQVRK YR+I+WSVGIVE F+P + S
Sbjct: 876 KIQAHVRGHQVRKHYRKIIWSVGIVEKVILRWRRRGAGLRGFRPTENAVTESTSSSSGNV 935
Query: 181 SQIQPAKXXXXXXXXXLKDGRKQAEGRLQRALARVKSMTQYPEAREQYSRIANRVTELQE 240
+Q +PA+ L++GRKQ E RLQ+ALARVKSM QYP+AR+QY RI VT++QE
Sbjct: 936 TQNRPAE----NDYDFLQEGRKQTEERLQKALARVKSMVQYPDARDQYQRILTVVTKMQE 991
Query: 241 PQAMMIQDDMQSDGAIADGGDFMAELEELCGDGDAPMP 278
QAM Q+ M + D G M+E +EL D D P P
Sbjct: 992 SQAM--QEKMLEESTEMDEGLLMSEFKELW-DDDMPTP 1026
>Os10g0375600 Similar to ER66 protein (Fragment)
Length = 1023
Score = 237 bits (604), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 140/279 (50%), Positives = 177/279 (63%), Gaps = 17/279 (6%)
Query: 1 EICGLGGAEDFAESSSAQLAYRDSQAESLKDSLSAVRKSTQAAARIFQAFRVESFHRKKV 60
EI GL G D E +++Q A + DSL AVR + QAAARI+Q FRV+SF RK+
Sbjct: 758 EISGLPGIGDVTERNASQPA--------IGDSLGAVRNAAQAAARIYQVFRVQSFQRKQA 809
Query: 61 VEYGDDDCGLSDERTLSLVSIKNAKPGQNDGSHSAAVRIQNKFRGWKGRKEFMIIRQKIV 120
V+Y D G+SDE LSL+S+K +K GQ D H+AA RIQNK+RGWKGRKEF++ RQ+IV
Sbjct: 810 VQYEGDKGGISDEHALSLLSMKPSKSGQLDPLHAAASRIQNKYRGWKGRKEFLLFRQRIV 869
Query: 121 KIQAHVRGHQVRKSYRRIVWSVGIVEXXXXXXXXXXXXXXXFQPVKQLEGPSPIQQLEGP 180
KIQAHVRGHQVRK YR+IVWSVGIVE F+P + I+ G
Sbjct: 870 KIQAHVRGHQVRKHYRKIVWSVGIVEKVILRWRRRRAGLRGFRPTE-----GAIESSSGG 924
Query: 181 SQIQPAKXXXX-XXXXXLKDGRKQAEGRLQRALARVKSMTQYPEAREQYSRIANRVTELQ 239
+ K L++GRKQ E RLQ+ALARVKSM QYPEAR+QY RI N V+++Q
Sbjct: 925 TSSNLVKDKPAGDDYDFLQEGRKQTEERLQKALARVKSMVQYPEARDQYQRILNVVSKMQ 984
Query: 240 EPQAMMIQDDMQSDGAIADGGDFMAELEELCGDGDAPMP 278
E Q +Q+ + + D GDFM+E +EL D D P+P
Sbjct: 985 ESQT--VQEKILDESTEMDEGDFMSEFKELW-DDDTPLP 1020
>Os01g0923600 CG-1 domain containing protein
Length = 878
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 71/205 (34%), Positives = 100/205 (48%), Gaps = 26/205 (12%)
Query: 28 SLKDSLSAVRKSTQAAARIFQAFRVESFHRKKVVEYGDDDCGLSDERTLSLVSIKNAKPG 87
+LK+SL A+R + QAA RI AFR+ SF +K+ GL + R ++SI+
Sbjct: 658 ALKESLGAMRYAVQAAGRIQTAFRIFSFRKKQ-------QAGLQN-RGNHIISIREVGAA 709
Query: 88 QNDGSHSAAVRIQNKFRGWKGRKEFMIIRQKIVKIQAHVRGHQVRKSYRRIVWSVGIVEX 147
+ AA+ IQ FR WK RKEF+ IR+ ++KIQA VR HQ Y+ ++ SVGI+E
Sbjct: 710 SHGMLEKAALSIQKNFRCWKKRKEFLKIRKNVIKIQARVRAHQQHNKYKELLRSVGILEK 769
Query: 148 XXXXXXXXXXXXXXFQPVKQLEGPSPIQQLEGPSQIQPAKXXXXXXXXXLKDGRKQ-AEG 206
F P PI + E + K RKQ E
Sbjct: 770 VMLRWYRKGVGLRGFHPGAI---AMPIDE-EDEDDVA-------------KVFRKQRVET 812
Query: 207 RLQRALARVKSMTQYPEAREQYSRI 231
L +A++RV S+ P AR+QY R+
Sbjct: 813 ALNKAVSRVSSIIDSPVARQQYRRM 837
>Os07g0490200 Similar to Ankyrin repeat-rich membrane-spanning protein
Length = 927
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 80/137 (58%), Gaps = 10/137 (7%)
Query: 95 AAVRIQNKFRGWKGRKEFMIIRQKIVKIQAHVRGHQVRKSYRRIVWSVGIVEXXXXXXXX 154
AA RIQ+ FR WK R+ F+ +R+++++IQA RGHQVR+ YR+++WSVGIVE
Sbjct: 779 AAARIQSHFRTWKMRRNFINMRRQVIRIQAAYRGHQVRRQYRKVIWSVGIVEKAILRWRK 838
Query: 155 XXXXXXXFQPVKQLEGPSPIQQLEGPSQIQPAKXXXXXXXXXLKDGRKQAEGRLQRALAR 214
+ ++ + P+ + ++ +PA + GR+QAE R R++ R
Sbjct: 839 KR------KGLRGIASGMPV-VMTVDAEAEPAS---TAEEDFFQAGRQQAEDRFNRSVVR 888
Query: 215 VKSMTQYPEAREQYSRI 231
V+++ + +A+++Y R+
Sbjct: 889 VQALFRSYKAQQEYRRM 905
>Os04g0388500 CG-1 domain containing protein
Length = 1003
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 74/209 (35%), Positives = 104/209 (49%), Gaps = 11/209 (5%)
Query: 28 SLKDSLSAVRKSTQAAARIFQAFRVESFH-RKKVVEYGDDDCGLS----DERTLSLVSIK 82
SLKDSL+AVR + QAAARI AFR SF R++ D+ G++ DE + S
Sbjct: 791 SLKDSLAAVRNAAQAAARIQNAFRAFSFRKRQQKTARLKDEYGMTQEDIDELAAASRSYY 850
Query: 83 NAKPGQNDGSHSAAVRIQNKFRGWKGRKEFMIIRQKIVKIQAHVRGHQVRKSYRRIVWSV 142
+ AAV IQ KF+GWKGR+ F+ +R+ VKIQAHVRGHQVRK Y+ V +V
Sbjct: 851 QSLLPNGQFYDKAAVSIQKKFKGWKGRRHFLNMRRNAVKIQAHVRGHQVRKKYKTFVSTV 910
Query: 143 GIVEXXXXXXXXXXXXXXXFQPVKQLEGPSPIQQLEGPSQIQPAKXXXXXXXXXLKDGRK 202
++E F+ E + + E + R+
Sbjct: 911 SVLEKVILRWRRKGHGLRGFRA----EQTAMAEAEEDDEDDDDDDFNDDEAVKVFR--RQ 964
Query: 203 QAEGRLQRALARVKSMTQYPEAREQYSRI 231
+ + ++ A++RV SM PEAR QY R+
Sbjct: 965 KVDESVKEAMSRVLSMVDSPEARMQYRRM 993
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.316 0.131 0.370
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 8,639,624
Number of extensions: 305298
Number of successful extensions: 913
Number of sequences better than 1.0e-10: 7
Number of HSP's gapped: 901
Number of HSP's successfully gapped: 7
Length of query: 281
Length of database: 17,035,801
Length adjustment: 100
Effective length of query: 181
Effective length of database: 11,814,401
Effective search space: 2138406581
Effective search space used: 2138406581
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 155 (64.3 bits)