Os07g0623100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to ER66 protein (Fragment).
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Os07g0623100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to ER66 protein (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 35.76 | 0.281 | 13 | 1.36 | 1.01 | -0.977 | -0.756 | 2.09 | 0.598 | 16 | 24.73 | 15 | -- | -- |
| 36.81 | 0.285 | 13 | 1.13 | 0.985 | -0.81 | -0.438 | -- | 0.565 | 16 | 23.09 | 26 | -- | -- |
| 37.2 | 0.284 | 13 | 1.33 | 1.01 | -0.955 | -- | 1.85 | 0.597 | 16.1 | 24.9 | 18 | -- | -- |
| 37.26 | 0.284 | 13 | 1.13 | 1 | -0.835 | -- | -- | 0.569 | 16.1 | 23.1 | 18 | -- | -- |
| 73.28 | 0.401 | 13 | 1.05 | -- | -0.225 | -- | 1.44 | 0.443 | -- | 27.6 | 5 | -- | -- |
| 47.33 | 0.323 | 13.1 | 0.978 | 0.695 | -- | -0.589 | -- | 0.448 | 16.5 | -- | -- | -- | -- |
| 48.15 | 0.325 | 13.1 | 0.974 | 0.696 | -- | -- | -- | 0.445 | 16.7 | -- | -- | -- | -- |
| 73.32 | 0.399 | 13.1 | 0.952 | -- | -0.282 | -- | -- | 0.419 | -- | 31.7 | 4 | -- | -- |
| 68.73 | 0.388 | 13.1 | -- | 0.861 | -0.517 | -- | -- | 0.394 | 16.3 | 23.76 | 54 | -- | -- |
| 73.78 | 0.401 | 13.1 | 0.947 | -- | -- | -- | -- | 0.427 | -- | -- | -- | -- | -- |
| 73.14 | 0.4 | 13.1 | -- | 0.678 | -- | -- | -- | 0.336 | 16.8 | -- | -- | -- | -- |
| 92.53 | 0.448 | 13.1 | -- | -- | -0.359 | -- | -- | 0.317 | -- | 25 | 1284 | -- | -- |
| 97.46 | 0.461 | 13.1 | -- | -- | -- | -- | -- | 0.321 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 34.00 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 5 | 14 |
| 5 | 34.42 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 19 | 22 |
| 10 | 34.62 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 19 | 2 |
| 12 | 34.78 | wind | 9.0 | 43200 | > th | dose independent | rect. | 19 | 2 |
| 13 | 34.83 | wind | 9.0 | 43200 | < th | dose independent | rect. | 19 | 2 |
| 15 | 34.84 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 19 | 13 |
| 23 | 34.99 | temperature | 20.0 | 90 | > th | dose dependent | sin | 0 | NA |
| 25 | 34.99 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 19 | 2 |
| 27 | 35.01 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 18 | 14 |
| 31 | 35.05 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 7 | 11 |
| 32 | 35.06 | temperature | 30.0 | 720 | < th | dose dependent | sin | 3 | NA |
| 34 | 35.07 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 37 | 35.09 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 17 | 4 |
| 39 | 35.10 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 7 | 23 |
| 60 | 35.14 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 22 | 18 |
| 63 | 35.17 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 18 | 1 |
| 66 | 35.17 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 3 | 14 |
| 69 | 35.18 | temperature | 10.0 | 90 | > th | dose dependent | sin | 0 | NA |
| 71 | 35.18 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 7 | 17 |
| 83 | 35.22 | temperature | 30.0 | 270 | < th | dose dependent | sin | 1 | NA |
| 87 | 35.23 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 15 | 1 |
| 95 | 35.26 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 7 | 15 |
| 99 | 35.27 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 100 | 35.27 | temperature | 20.0 | 270 | > th | dose dependent | sin | 3 | NA |
| 102 | 35.27 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 13 | 3 |
| 110 | 35.29 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 3 | 15 |
| 137 | 35.32 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 139 | 35.32 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 17 | 1 |
| 145 | 35.33 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 147 | 35.33 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 13 | 6 |
| 160 | 35.35 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 11 | 8 |
| 192 | 35.41 | radiation | 40.0 | 4320 | < th | dose dependent | rect. | 18 | 6 |
| 232 | 35.48 | radiation | 40.0 | 4320 | < th | dose dependent | rect. | 18 | 10 |
| 235 | 35.48 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 23 | 16 |
| 237 | 35.49 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 9 | 12 |
| 283 | 35.55 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 1 | 16 |
| 284 | 35.55 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 1 | 17 |
| 304 | 35.60 | temperature | 10.0 | 270 | > th | dose dependent | sin | 3 | NA |
| 335 | 35.64 | radiation | 40.0 | 4320 | < th | dose dependent | rect. | 18 | 4 |
| 340 | 35.64 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 23 | 19 |
| 349 | 35.65 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 23 | 18 |
| 352 | 35.66 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 9 | 12 |
| 359 | 35.67 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 13 | 1 |
| 362 | 35.67 | radiation | 40.0 | 4320 | < th | dose dependent | rect. | 18 | 8 |
| 397 | 35.70 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 1 | 23 |
| 407 | 35.72 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 19 | 13 |
| 439 | 35.76 | temperature | 25.0 | 1440 | > th | dose dependent | sin | 20 | NA |
| 441 | 35.76 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 3 |
| 455 | 35.77 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 11 | 5 |
| 457 | 35.77 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 19 | 6 |
| 486 | 35.80 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 18 | 1 |
| 513 | 35.82 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 543 | 35.86 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 15 | 1 |
| 548 | 35.86 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 19 | 9 |
| 568 | 35.88 | temperature | 25.0 | 10 | > th | dose dependent | no | NA | NA |
| 581 | 35.89 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 4 | 6 |
| 633 | 35.92 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 9 | 12 |
| 649 | 35.94 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 703 | 35.97 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 18 | 1 |
| 780 | 36.01 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 17 | 9 |
| 801 | 36.02 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 17 | 3 |
| 803 | 36.02 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 17 | 7 |