Os04g0388500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : CG-1 domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os04g0388500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : CG-1 domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 21.25 | 0.217 | 12.6 | 0.756 | 0.452 | -0.458 | 0.148 | -0.218 | 0.552 | 18.2 | 1.438 | 89 | -- | -- |
| 21.35 | 0.215 | 12.6 | 0.752 | 0.451 | -0.44 | 0.145 | -- | 0.553 | 18.2 | 1.207 | 88 | -- | -- |
| 21.3 | 0.215 | 12.6 | 0.755 | 0.451 | -0.443 | -- | -0.224 | 0.552 | 18.3 | 2.54 | 88 | -- | -- |
| 21.4 | 0.215 | 12.6 | 0.749 | 0.45 | -0.435 | -- | -- | 0.552 | 18.3 | 1.562 | 88 | -- | -- |
| 30.73 | 0.26 | 12.6 | 0.75 | -- | -0.434 | -- | -0.128 | 0.522 | -- | -4.382 | 37 | -- | -- |
| 23.76 | 0.228 | 12.6 | 0.751 | 0.486 | -- | 0.0931 | -- | 0.532 | 20.3 | -- | -- | -- | -- |
| 23.78 | 0.228 | 12.6 | 0.748 | 0.485 | -- | -- | -- | 0.532 | 20.3 | -- | -- | -- | -- |
| 30.76 | 0.259 | 12.6 | 0.746 | -- | -0.434 | -- | -- | 0.522 | -- | -4.382 | 37 | -- | -- |
| 36.27 | 0.28 | 12.6 | -- | 0.461 | -0.418 | -- | -- | 0.469 | 18.5 | 2.676 | 125 | -- | -- |
| 36.82 | 0.284 | 12.6 | 0.745 | -- | -- | -- | -- | 0.526 | -- | -- | -- | -- | -- |
| 38.54 | 0.29 | 12.6 | -- | 0.482 | -- | -- | -- | 0.448 | 20.4 | -- | -- | -- | -- |
| 45.34 | 0.314 | 12.6 | -- | -- | -0.443 | -- | -- | 0.453 | -- | -1.184 | 49 | -- | -- |
| 51.46 | 0.335 | 12.6 | -- | -- | -- | -- | -- | 0.444 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 18.83 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 3 | 5 |
| 2 | 18.88 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 2 | 7 |
| 5 | 19.04 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 4 | 3 |
| 6 | 19.05 | wind | 1.0 | 43200 | < th | dose independent | rect. | 4 | 4 |
| 7 | 19.10 | wind | 1.0 | 43200 | > th | dose independent | rect. | 4 | 4 |
| 18 | 19.43 | wind | 1.0 | 43200 | > th | dose independent | rect. | 5 | 2 |
| 36 | 19.69 | wind | 1.0 | 43200 | < th | dose independent | rect. | 23 | 8 |
| 66 | 19.97 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 74 | 20.04 | wind | 1.0 | 43200 | < th | dose independent | rect. | 2 | 11 |
| 79 | 20.06 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 13 |
| 83 | 20.08 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 3 | 11 |
| 89 | 20.11 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 13 |
| 91 | 20.11 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 13 |
| 95 | 20.12 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 13 |
| 115 | 20.18 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 2 | 15 |
| 122 | 20.20 | wind | 1.0 | 43200 | > th | dose independent | rect. | 2 | 11 |
| 132 | 20.25 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 143 | 20.30 | wind | 1.0 | 43200 | < th | dose independent | sin | 8 | NA |
| 145 | 20.30 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 1 | 8 |
| 152 | 20.31 | precipitation | 0.1 | 14400 | > th | dose dependent | sin | 3 | NA |
| 160 | 20.32 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 3 | 2 |
| 171 | 20.33 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 3 | 7 |
| 173 | 20.33 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 2 | 19 |
| 178 | 20.35 | wind | 1.0 | 43200 | > th | dose independent | sin | 8 | NA |
| 179 | 20.35 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 3 | 2 |
| 196 | 20.37 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 3 | 2 |
| 199 | 20.37 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 3 | 2 |
| 202 | 20.38 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 3 | 11 |
| 212 | 20.39 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 3 | 11 |
| 219 | 20.39 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 3 | 11 |
| 235 | 20.42 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 1 | 8 |
| 254 | 20.44 | precipitation | 0.1 | 14400 | > th | dose independent | sin | 2 | NA |
| 255 | 20.44 | precipitation | 0.1 | 14400 | < th | dose independent | sin | 2 | NA |
| 260 | 20.44 | precipitation | 0.1 | 14400 | < th | dose dependent | sin | 2 | NA |
| 264 | 20.45 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 1 | 7 |
| 272 | 20.45 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 1 | 7 |
| 310 | 20.48 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 1 | 13 |
| 316 | 20.49 | humidity | 80.0 | 10 | > th | dose independent | rect. | 7 | 12 |
| 344 | 20.53 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 2 | 4 |
| 406 | 20.57 | wind | 1.0 | 43200 | < th | dose dependent | sin | 7 | NA |
| 440 | 20.59 | wind | 1.0 | 43200 | < th | dose independent | rect. | 16 | 16 |
| 461 | 20.61 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 7 | 1 |
| 473 | 20.61 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 7 | 1 |
| 499 | 20.62 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 1 | 13 |
| 524 | 20.63 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 1 | 13 |
| 534 | 20.63 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 1 | 13 |
| 560 | 20.65 | humidity | 80.0 | 10 | < th | dose independent | rect. | 9 | 9 |
| 591 | 20.67 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 7 | 1 |
| 592 | 20.67 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 9 | 8 |
| 603 | 20.67 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 7 | 1 |
| 605 | 20.67 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 9 | 8 |
| 625 | 20.69 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 9 | 8 |
| 635 | 20.69 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 9 | 8 |
| 637 | 20.69 | radiation | 30.0 | 90 | < th | dose dependent | rect. | 6 | 13 |
| 724 | 20.74 | wind | 1.0 | 43200 | > th | dose independent | rect. | 16 | 15 |
| 736 | 20.74 | humidity | 70.0 | 30 | > th | dose dependent | rect. | 6 | 12 |
| 773 | 20.76 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 1 | 19 |
| 814 | 20.79 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 23 | 2 |
| 823 | 20.79 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 23 | 21 |
| 868 | 20.82 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 875 | 20.83 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 12 | 5 |
| 886 | 20.83 | humidity | 60.0 | 43200 | < th | dose dependent | rect. | 14 | 1 |
| 889 | 20.83 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 12 | 5 |
| 894 | 20.84 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 12 | 5 |
| 911 | 20.85 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 7 | 7 |
| 930 | 20.86 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 12 | 5 |
| 975 | 20.89 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 8 | 1 |