Os03g0388500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Anther ethylene-upregulated protein ER1 (Fragment).
FiT-DB / Search/ Help/ Sample detail
|
Os03g0388500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to Anther ethylene-upregulated protein ER1 (Fragment).
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 71.25 | 0.397 | 12.3 | 1.47 | 0.898 | 0.792 | -0.582 | 1.13 | 0.493 | 15.7 | 80 | 1538 | -- | -- |
| 72.22 | 0.396 | 12.3 | 1.55 | 0.924 | 0.872 | -0.671 | -- | 0.51 | 15.7 | 80.42 | 1556 | -- | -- |
| 72.1 | 0.395 | 12.3 | 1.46 | 0.92 | 0.762 | -- | 1.26 | 0.49 | 15.9 | 80 | 1579 | -- | -- |
| 73.45 | 0.399 | 12.3 | 1.54 | 0.926 | 0.84 | -- | -- | 0.506 | 15.9 | 80.58 | 1561 | -- | -- |
| 105.18 | 0.478 | 12.3 | 1.45 | -- | 1.12 | -- | 1.13 | 0.536 | -- | 80 | 1265 | -- | -- |
| 80.82 | 0.421 | 12.3 | 1.54 | 0.861 | -- | -0.502 | -- | 0.464 | 15.8 | -- | -- | -- | -- |
| 81.49 | 0.423 | 12.3 | 1.53 | 0.863 | -- | -- | -- | 0.461 | 16 | -- | -- | -- | -- |
| 104.89 | 0.477 | 12.3 | 1.53 | -- | 1.07 | -- | -- | 0.509 | -- | 80.07 | 1240 | -- | -- |
| 127.45 | 0.526 | 12.3 | -- | 0.867 | 0.94 | -- | -- | 0.663 | 15.9 | 77 | 8700 | -- | -- |
| 122.14 | 0.516 | 12.3 | 1.5 | -- | -- | -- | -- | 0.438 | -- | -- | -- | -- | -- |
| 143.35 | 0.56 | 12.3 | -- | 0.833 | -- | -- | -- | 0.29 | 16 | -- | -- | -- | -- |
| 138.61 | 0.548 | 12.3 | -- | -- | 1.35 | -- | -- | 0.236 | -- | 65.43 | 47520 | -- | -- |
| 181.24 | 0.628 | 12.3 | -- | -- | -- | -- | -- | 0.272 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 66.55 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 5 | 3 |
| 7 | 67.45 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 5 | 11 |
| 8 | 67.57 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 6 | 17 |
| 9 | 67.60 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 11 | 13 |
| 24 | 67.90 | humidity | 70.0 | 90 | > th | dose dependent | rect. | 5 | 22 |
| 29 | 67.94 | humidity | 70.0 | 720 | > th | dose independent | rect. | 16 | 9 |
| 32 | 68.01 | humidity | 60.0 | 720 | > th | dose independent | rect. | 13 | 5 |
| 39 | 68.09 | humidity | 60.0 | 720 | > th | dose independent | rect. | 15 | 2 |
| 44 | 68.14 | humidity | 50.0 | 720 | > th | dose dependent | sin | 20 | NA |
| 50 | 68.24 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 23 | 13 |
| 53 | 68.26 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 24 | 11 |
| 56 | 68.32 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 12 | 6 |
| 68 | 68.38 | humidity | 60.0 | 720 | > th | dose independent | rect. | 13 | 12 |
| 70 | 68.39 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 15 | 2 |
| 73 | 68.40 | humidity | 60.0 | 720 | > th | dose independent | rect. | 13 | 10 |
| 97 | 68.52 | temperature | 10.0 | 90 | > th | dose dependent | sin | 1 | NA |
| 104 | 68.57 | temperature | 10.0 | 270 | > th | dose dependent | sin | 3 | NA |
| 107 | 68.58 | temperature | 30.0 | 720 | < th | dose dependent | sin | 6 | NA |
| 109 | 68.59 | humidity | 80.0 | 90 | > th | dose independent | rect. | 5 | 22 |
| 118 | 68.64 | temperature | 30.0 | 720 | < th | dose independent | rect. | 6 | 21 |
| 133 | 68.73 | humidity | 80.0 | 10 | > th | dose independent | rect. | 7 | 20 |
| 145 | 68.75 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 6 | 21 |
| 153 | 68.79 | temperature | 30.0 | 720 | < th | dose independent | rect. | 5 | 14 |
| 170 | 68.84 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 3 | 17 |
| 186 | 68.90 | humidity | 70.0 | 720 | > th | dose independent | rect. | 17 | 1 |
| 214 | 69.00 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 22 | 16 |
| 266 | 69.15 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 22 | 13 |
| 269 | 69.16 | temperature | 25.0 | 270 | < th | dose independent | rect. | 5 | 10 |
| 277 | 69.18 | humidity | 70.0 | 720 | > th | dose independent | sin | 18 | NA |
| 290 | 69.21 | temperature | 30.0 | 270 | < th | dose dependent | sin | 2 | NA |
| 292 | 69.21 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 6 | 13 |
| 321 | 69.27 | temperature | 30.0 | 720 | < th | dose independent | rect. | 13 | 14 |
| 335 | 69.29 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 10 | 11 |
| 345 | 69.31 | humidity | 60.0 | 720 | > th | dose independent | rect. | 6 | 18 |
| 361 | 69.33 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 3 | 19 |
| 377 | 69.36 | temperature | 30.0 | 720 | < th | dose independent | rect. | 15 | 10 |
| 393 | 69.39 | temperature | 25.0 | 720 | < th | dose independent | rect. | 4 | 6 |
| 395 | 69.39 | temperature | 30.0 | 720 | < th | dose independent | rect. | 11 | 15 |
| 418 | 69.43 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 18 | 17 |
| 419 | 69.44 | temperature | 30.0 | 720 | < th | dose independent | sin | 14 | NA |
| 435 | 69.47 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 23 | 16 |
| 438 | 69.47 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 23 | 16 |
| 448 | 69.50 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 19 | 1 |
| 454 | 69.51 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 17 | 14 |
| 459 | 69.52 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 17 | 3 |
| 471 | 69.53 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 17 | 8 |
| 516 | 69.58 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 17 | 8 |
| 533 | 69.61 | humidity | 60.0 | 720 | > th | dose independent | rect. | 6 | 12 |
| 540 | 69.63 | temperature | 30.0 | 720 | < th | dose independent | rect. | 15 | 2 |
| 542 | 69.63 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 23 | 6 |
| 545 | 69.63 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 8 | 12 |
| 553 | 69.65 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 5 | 22 |
| 555 | 69.65 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 18 | 3 |
| 561 | 69.66 | temperature | 10.0 | 720 | > th | dose dependent | sin | 7 | NA |
| 570 | 69.68 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 5 | 1 |
| 604 | 69.72 | humidity | 80.0 | 10 | > th | dose independent | rect. | 13 | 14 |
| 619 | 69.74 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 5 | 1 |
| 632 | 69.75 | temperature | 30.0 | 720 | < th | dose independent | rect. | 13 | 5 |
| 683 | 69.80 | humidity | 70.0 | 1440 | > th | dose independent | sin | 14 | NA |
| 699 | 69.83 | temperature | 30.0 | 720 | < th | dose independent | sin | 0 | NA |
| 710 | 69.85 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 16 | 16 |
| 733 | 69.88 | temperature | 30.0 | 720 | < th | dose independent | rect. | 11 | 7 |
| 743 | 69.89 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 13 | 14 |
| 764 | 69.93 | humidity | 80.0 | 1440 | < th | dose independent | sin | 19 | NA |
| 796 | 69.97 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 13 | 8 |
| 809 | 69.97 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 8 | 14 |
| 927 | 70.06 | radiation | 40.0 | 720 | < th | dose independent | rect. | 5 | 12 |
| 953 | 70.09 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 19 | 1 |
| 969 | 70.11 | humidity | 80.0 | 14400 | < th | dose dependent | sin | 13 | NA |
| 978 | 70.12 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 19 | 1 |
| 986 | 70.12 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 5 | 11 |
| 988 | 70.12 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 18 | 23 |