BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0388500 Os03g0388500|AK070350
(297 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os03g0388500 Similar to Anther ethylene-upregulated protein... 519 e-148
Os07g0623100 Similar to ER66 protein (Fragment) 280 6e-76
Os03g0191000 Similar to CG-1 protein (Fragment) 273 1e-73
Os10g0375600 Similar to ER66 protein (Fragment) 261 5e-70
Os07g0490200 Similar to Ankyrin repeat-rich membrane-spanni... 117 8e-27
Os01g0923600 CG-1 domain containing protein 115 3e-26
Os04g0388500 CG-1 domain containing protein 104 7e-23
>Os03g0388500 Similar to Anther ethylene-upregulated protein ER1 (Fragment)
Length = 297
Score = 519 bits (1337), Expect = e-148, Method: Compositional matrix adjust.
Identities = 257/297 (86%), Positives = 257/297 (86%)
Query: 1 VLIANGAAAGALTDPTSEFPSGRTPADLASTNGHKGIAGFXXXXXXXXXXXXXXXKESKD 60
VLIANGAAAGALTDPTSEFPSGRTPADLASTNGHKGIAGF KESKD
Sbjct: 1 VLIANGAAAGALTDPTSEFPSGRTPADLASTNGHKGIAGFLAESALTSHLSALTLKESKD 60
Query: 61 SNAEEACRLTIPEDLPEMNYGQLAVQDSHAESLKDSLSAVRKSXXXXXXXXXXXXVESFH 120
SNAEEACRLTIPEDLPEMNYGQLAVQDSHAESLKDSLSAVRKS VESFH
Sbjct: 61 SNAEEACRLTIPEDLPEMNYGQLAVQDSHAESLKDSLSAVRKSAQAAARIFQAFRVESFH 120
Query: 121 RKKVVEYGDDDCGLSDEHTFSLISLQKVKQGQHDTRLHSAAVRIQNKFRGWKGRKEFMII 180
RKKVVEYGDDDCGLSDEHTFSLISLQKVKQGQHDTRLHSAAVRIQNKFRGWKGRKEFMII
Sbjct: 121 RKKVVEYGDDDCGLSDEHTFSLISLQKVKQGQHDTRLHSAAVRIQNKFRGWKGRKEFMII 180
Query: 181 RQRIVKLQAHVRGHQVRKNYKKVVWSVGIVEKVILXXXXXXXXXXXXXPEKQLEGQTQIQ 240
RQRIVKLQAHVRGHQVRKNYKKVVWSVGIVEKVIL PEKQLEGQTQIQ
Sbjct: 181 RQRIVKLQAHVRGHQVRKNYKKVVWSVGIVEKVILRWRRKGRGLRGFRPEKQLEGQTQIQ 240
Query: 241 PAKTEDEYDYLQDGRRQAEGRLQRALDRVRSMTQYPEAREQYRRLTTCVAEMQQSRV 297
PAKTEDEYDYLQDGRRQAEGRLQRALDRVRSMTQYPEAREQYRRLTTCVAEMQQSRV
Sbjct: 241 PAKTEDEYDYLQDGRRQAEGRLQRALDRVRSMTQYPEAREQYRRLTTCVAEMQQSRV 297
>Os07g0623100 Similar to ER66 protein (Fragment)
Length = 281
Score = 280 bits (717), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 156/241 (64%), Positives = 176/241 (73%), Gaps = 12/241 (4%)
Query: 65 EACRLTIPEDLPEMNYGQLAVQDSHAESLKDSLSAVRKSXXXXXXXXXXXXVESFHRKKV 124
E C L ED E + QLA +DS AESLKDSLSAVRKS VESFHRKKV
Sbjct: 1 EICGLGGAEDFAESSSAQLAYRDSQAESLKDSLSAVRKSTQAAARIFQAFRVESFHRKKV 60
Query: 125 VEYGDDDCGLSDEHTFSLISLQKVKQGQHDTRLHSAAVRIQNKFRGWKGRKEFMIIRQRI 184
VEYGDDDCGLSDE T SL+S++ K GQ+D HSAAVRIQNKFRGWKGRKEFMIIRQ+I
Sbjct: 61 VEYGDDDCGLSDERTLSLVSIKNAKPGQNDGS-HSAAVRIQNKFRGWKGRKEFMIIRQKI 119
Query: 185 VKLQAHVRGHQVRKNYKKVVWSVGIVEKVILXXXXXXXXXXXXXPEK---------QLEG 235
VK+QAHVRGHQVRK+Y+++VWSVGIVEK+IL P K QLEG
Sbjct: 120 VKIQAHVRGHQVRKSYRRIVWSVGIVEKIILRWRRKRRGLRGFQPVKQLEGPSPIQQLEG 179
Query: 236 QTQIQPAK--TEDEYDYLQDGRRQAEGRLQRALDRVRSMTQYPEAREQYRRLTTCVAEMQ 293
+QIQPAK EDEYDYL+DGR+QAEGRLQRAL RV+SMTQYPEAREQY R+ V E+Q
Sbjct: 180 PSQIQPAKEEEEDEYDYLKDGRKQAEGRLQRALARVKSMTQYPEAREQYSRIANRVTELQ 239
Query: 294 Q 294
+
Sbjct: 240 E 240
>Os03g0191000 Similar to CG-1 protein (Fragment)
Length = 1029
Score = 273 bits (698), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 149/304 (49%), Positives = 194/304 (63%), Gaps = 12/304 (3%)
Query: 2 LIANGAAAGALTDPTSEFPSGRTPADLASTNGHKGIAGFXXXXXXXXXXXXXXXKESKDS 61
LIA GAA GA+TDPT FPSG TPADLAS NGHKGI+GF KE+ S
Sbjct: 693 LIALGAAPGAVTDPTPSFPSGSTPADLASANGHKGISGFLAESSLTSHLQTLNLKEAMRS 752
Query: 62 NAEEACRLTIPEDLPEMNYGQLAVQDSHAESLKDSLSAVRKSXXXXXXXXXXXXVESFHR 121
+A E L ++ + + LAV+ S+ DSL AVR + ++SF R
Sbjct: 753 SAGEISGLPGIVNVADRSASPLAVEGHQTGSMGDSLGAVRNAAQAAARIYQVFRMQSFQR 812
Query: 122 KKVVEYGDDDCGLSDEHTFSLISLQKVKQGQHDTRLHSAAVRIQNKFRGWKGRKEFMIIR 181
K+ V+Y D++ +SDE SL+S + K Q D LH+AA RIQNKFRGWKGRKEF++IR
Sbjct: 813 KQAVQYEDENGAISDERAMSLLSAKPSKPAQLDP-LHAAATRIQNKFRGWKGRKEFLLIR 871
Query: 182 QRIVKLQAHVRGHQVRKNYKKVVWSVGIVEKVILXXXXXXXXXXXXXPEKQLEGQ----- 236
QRIVK+QAHVRGHQVRK+Y+K++WSVGIVEKVIL P + +
Sbjct: 872 QRIVKIQAHVRGHQVRKHYRKIIWSVGIVEKVILRWRRRGAGLRGFRPTENAVTESTSSS 931
Query: 237 ----TQIQPAKTEDEYDYLQDGRRQAEGRLQRALDRVRSMTQYPEAREQYRRLTTCVAEM 292
TQ +PA E++YD+LQ+GR+Q E RLQ+AL RV+SM QYP+AR+QY+R+ T V +M
Sbjct: 932 SGNVTQNRPA--ENDYDFLQEGRKQTEERLQKALARVKSMVQYPDARDQYQRILTVVTKM 989
Query: 293 QQSR 296
Q+S+
Sbjct: 990 QESQ 993
>Os10g0375600 Similar to ER66 protein (Fragment)
Length = 1023
Score = 261 bits (666), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 147/303 (48%), Positives = 186/303 (61%), Gaps = 19/303 (6%)
Query: 2 LIANGAAAGALTDPTSEFPSGRTPADLASTNGHKGIAGFXXXXXXXXXXXXXXXKESKDS 61
LIA GAA GALTDP +P+ TPADLAS NGHKGI+GF KE+
Sbjct: 698 LIALGAAPGALTDPHPNYPAESTPADLASANGHKGISGFLAESSLTSHLQALNLKEA--- 754
Query: 62 NAEEACRLTIPEDLPEMNYGQLAVQDSHAESLKDSLSAVRKSXXXXXXXXXXXXVESFHR 121
N E L D+ E N Q A+ DSL AVR + V+SF R
Sbjct: 755 NMSEISGLPGIGDVTERNASQPAI--------GDSLGAVRNAAQAAARIYQVFRVQSFQR 806
Query: 122 KKVVEYGDDDCGLSDEHTFSLISLQKVKQGQHDTRLHSAAVRIQNKFRGWKGRKEFMIIR 181
K+ V+Y D G+SDEH SL+S++ K GQ D LH+AA RIQNK+RGWKGRKEF++ R
Sbjct: 807 KQAVQYEGDKGGISDEHALSLLSMKPSKSGQLDP-LHAAASRIQNKYRGWKGRKEFLLFR 865
Query: 182 QRIVKLQAHVRGHQVRKNYKKVVWSVGIVEKVILXXXXXXXXXXXXXP-EKQLEGQTQ-- 238
QRIVK+QAHVRGHQVRK+Y+K+VWSVGIVEKVIL P E +E +
Sbjct: 866 QRIVKIQAHVRGHQVRKHYRKIVWSVGIVEKVILRWRRRRAGLRGFRPTEGAIESSSGGT 925
Query: 239 ----IQPAKTEDEYDYLQDGRRQAEGRLQRALDRVRSMTQYPEAREQYRRLTTCVAEMQQ 294
++ D+YD+LQ+GR+Q E RLQ+AL RV+SM QYPEAR+QY+R+ V++MQ+
Sbjct: 926 SSNLVKDKPAGDDYDFLQEGRKQTEERLQKALARVKSMVQYPEARDQYQRILNVVSKMQE 985
Query: 295 SRV 297
S+
Sbjct: 986 SQT 988
>Os07g0490200 Similar to Ankyrin repeat-rich membrane-spanning protein
Length = 927
Score = 117 bits (294), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 88/289 (30%), Positives = 147/289 (50%), Gaps = 15/289 (5%)
Query: 1 VLIANGAAAGALTDPTSEFPSGRTPADLASTNGHKGIAGFXXXXXXXXXXXXXXXKESKD 60
L++ GA +TDPT E P+G T ADLA+ G+ G+A + SKD
Sbjct: 628 TLLSAGANPSLVTDPTPESPAGLTAADLAARQGYDGLAAYLAEKGLTAHFEAMSL--SKD 685
Query: 61 S-NAEEACRLTIPEDLPEMNYGQLAVQDSHAESLKDSLSAVRKSXXXXXXXXXXXXVESF 119
+ + RLT L + L+ Q+ LK+SL+A R + +
Sbjct: 686 TEQSPSKTRLT---KLQSEKFEHLSEQEL---CLKESLAAYRNAADAASNIQAALRERTL 739
Query: 120 H-RKKVVEYGDDDCGLSDEHTFSLISLQKVKQGQHDTRLHSAAVRIQNKFRGWKGRKEFM 178
+ K ++ + + S+ + + +Q + + + AA RIQ+ FR WK R+ F+
Sbjct: 740 KLQTKAIQLANPEIEASE--IVAAMKIQHAFRNYNRKKAMRAAARIQSHFRTWKMRRNFI 797
Query: 179 IIRQRIVKLQAHVRGHQVRKNYKKVVWSVGIVEKVILXXXXXXXXXXXXXPEKQ--LEGQ 236
+R++++++QA RGHQVR+ Y+KV+WSVGIVEK IL +
Sbjct: 798 NMRRQVIRIQAAYRGHQVRRQYRKVIWSVGIVEKAILRWRKKRKGLRGIASGMPVVMTVD 857
Query: 237 TQIQPAKTEDEYDYLQDGRRQAEGRLQRALDRVRSMTQYPEAREQYRRL 285
+ +PA T +E D+ Q GR+QAE R R++ RV+++ + +A+++YRR+
Sbjct: 858 AEAEPASTAEE-DFFQAGRQQAEDRFNRSVVRVQALFRSYKAQQEYRRM 905
>Os01g0923600 CG-1 domain containing protein
Length = 878
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 89/281 (31%), Positives = 138/281 (49%), Gaps = 34/281 (12%)
Query: 13 TDPTSEFPSGRTPADLASTNGHKGIAGFXXXXXXXXXXXXXXXKESKDSNAEEACRLTIP 72
+DPT++ P+ +TPA +AS G KG++ + KE+ S+ ++ R+
Sbjct: 583 SDPTAQDPAAKTPASVASAYGFKGLSAYLSEAELIAHLHSLESKEN-GSSGDQISRVV-- 639
Query: 73 EDLPEMNYGQLAVQDSHAES-------LKDSLSAVRKSXXXXXXXXXXXXVESFHRKKVV 125
G+++ +HA+S LK+SL A+R + + SF +K+
Sbjct: 640 --------GRISDTSAHAQSGSDDQLALKESLGAMRYAVQAAGRIQTAFRIFSFRKKQ-- 689
Query: 126 EYGDDDCGLSDEHTFSLISLQKVKQGQHDTRLHSAAVRIQNKFRGWKGRKEFMIIRQRIV 185
GL + +IS+++V H L AA+ IQ FR WK RKEF+ IR+ ++
Sbjct: 690 -----QAGLQNRGN-HIISIREVGAASHGM-LEKAALSIQKNFRCWKKRKEFLKIRKNVI 742
Query: 186 KLQAHVRGHQVRKNYKKVVWSVGIVEKVILXXXXXXXXXXXXXPEKQLEGQTQIQPAKTE 245
K+QA VR HQ YK+++ SVGI+EKV+L P G + P E
Sbjct: 743 KIQARVRAHQQHNKYKELLRSVGILEKVMLRWYRKGVGLRGFHP-----GAIAM-PIDEE 796
Query: 246 DEYDYLQDGRRQ-AEGRLQRALDRVRSMTQYPEAREQYRRL 285
DE D + R+Q E L +A+ RV S+ P AR+QYRR+
Sbjct: 797 DEDDVAKVFRKQRVETALNKAVSRVSSIIDSPVARQQYRRM 837
>Os04g0388500 CG-1 domain containing protein
Length = 1003
Score = 104 bits (260), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 93/286 (32%), Positives = 134/286 (46%), Gaps = 15/286 (5%)
Query: 12 LTDPTSEFPSGRTPADLASTNGHKGIAGFXXXXXXXXXXXXXXXKESKDSNAEEACRLTI 71
+TDPT++ P G+T A LAS GH G+A + +ES S A
Sbjct: 711 VTDPTAQDPVGKTAAFLASERGHLGLAAYLSEVSLTSYLASLTIQESDTSKGSAAAEAER 770
Query: 72 PEDLPEMNYGQLAVQDSHAESLKDSLSAVRKSXXXXXXXXXXXXVESFH-RKKVVEYGDD 130
+ QL SLKDSL+AVR + SF R++ D
Sbjct: 771 AVESISQRNAQLHGGTEDELSLKDSLAAVRNAAQAAARIQNAFRAFSFRKRQQKTARLKD 830
Query: 131 DCGLSDEHTFSLISLQK------VKQGQHDTRLHSAAVRIQNKFRGWKGRKEFMIIRQRI 184
+ G++ E L + + + GQ + AAV IQ KF+GWKGR+ F+ +R+
Sbjct: 831 EYGMTQEDIDELAAASRSYYQSLLPNGQFYDK---AAVSIQKKFKGWKGRRHFLNMRRNA 887
Query: 185 VKLQAHVRGHQVRKNYKKVVWSVGIVEKVILXXXXXXXXXXXXXPEK----QLEGQTQIQ 240
VK+QAHVRGHQVRK YK V +V ++EKVIL E+ + E +
Sbjct: 888 VKIQAHVRGHQVRKKYKTFVSTVSVLEKVILRWRRKGHGLRGFRAEQTAMAEAEEDDEDD 947
Query: 241 PAKTEDEYDYLQDGRRQ-AEGRLQRALDRVRSMTQYPEAREQYRRL 285
++ + ++ RRQ + ++ A+ RV SM PEAR QYRR+
Sbjct: 948 DDDDFNDDEAVKVFRRQKVDESVKEAMSRVLSMVDSPEARMQYRRM 993
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.315 0.130 0.369
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 8,301,901
Number of extensions: 272793
Number of successful extensions: 736
Number of sequences better than 1.0e-10: 7
Number of HSP's gapped: 718
Number of HSP's successfully gapped: 7
Length of query: 297
Length of database: 17,035,801
Length adjustment: 100
Effective length of query: 197
Effective length of database: 11,814,401
Effective search space: 2327436997
Effective search space used: 2327436997
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 156 (64.7 bits)