BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os07g0586500 Os07g0586500|AK120683
(406 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os07g0586500 Similar to SUMO activating enzyme 2 803 0.0
Os01g0271500 Similar to RUB-activating enzyme (Ubiquitin ac... 162 5e-40
AK110124 132 4e-31
Os11g0106400 Similar to Ubiquitin-activating enzyme E1 2 125 7e-29
Os12g0105950 Similar to Ubiquitin-activating enzyme E1 2 123 2e-28
Os07g0692900 Similar to Ubiquitin-activating enzyme E1 3 114 2e-25
Os03g0294900 Similar to Ubiquitin-activating enzyme E1 3 109 4e-24
Os02g0525400 Similar to Molybdenum cofactor synthesis prote... 85 9e-17
Os02g0506500 Molybdenum cofactor biosynthesis domain contai... 74 2e-13
>Os07g0586500 Similar to SUMO activating enzyme 2
Length = 406
Score = 803 bits (2075), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/386 (100%), Positives = 386/386 (100%)
Query: 21 LMVGAGGIGCELLKTLALSGFRDIHIIDLDTIEVSNLNRQFLFRQSHVGQSKAHVARDAV 80
LMVGAGGIGCELLKTLALSGFRDIHIIDLDTIEVSNLNRQFLFRQSHVGQSKAHVARDAV
Sbjct: 21 LMVGAGGIGCELLKTLALSGFRDIHIIDLDTIEVSNLNRQFLFRQSHVGQSKAHVARDAV 80
Query: 81 LKFRPNINITSYHANVKDAQFNVEFFKQFNVVLNGLDNLDARRHVNRLCLAAEVPLVESG 140
LKFRPNINITSYHANVKDAQFNVEFFKQFNVVLNGLDNLDARRHVNRLCLAAEVPLVESG
Sbjct: 81 LKFRPNINITSYHANVKDAQFNVEFFKQFNVVLNGLDNLDARRHVNRLCLAAEVPLVESG 140
Query: 141 TTGFLGQVTVHVKGKTECYECQPKPVPKSYPVCTITSTPSKFVHCIVWAKELLFAKMFGD 200
TTGFLGQVTVHVKGKTECYECQPKPVPKSYPVCTITSTPSKFVHCIVWAKELLFAKMFGD
Sbjct: 141 TTGFLGQVTVHVKGKTECYECQPKPVPKSYPVCTITSTPSKFVHCIVWAKELLFAKMFGD 200
Query: 201 KNQDNDLNVRSNESGTSKSDVFERNADEDLDQYARRIYDHVFGYNIEVALENEETWKNRR 260
KNQDNDLNVRSNESGTSKSDVFERNADEDLDQYARRIYDHVFGYNIEVALENEETWKNRR
Sbjct: 201 KNQDNDLNVRSNESGTSKSDVFERNADEDLDQYARRIYDHVFGYNIEVALENEETWKNRR 260
Query: 261 RPNPIYIRDTLPEEAIRQNGSSRDINNEQEEPSAMVSLGLRNPQEIWSLADNSRVFLEAL 320
RPNPIYIRDTLPEEAIRQNGSSRDINNEQEEPSAMVSLGLRNPQEIWSLADNSRVFLEAL
Sbjct: 261 RPNPIYIRDTLPEEAIRQNGSSRDINNEQEEPSAMVSLGLRNPQEIWSLADNSRVFLEAL 320
Query: 321 KLFFEKREKEIGNLVFDKDDQLAVEFVTTAANIRASSFGIPLHSLFEAKGVAGNIVHAVA 380
KLFFEKREKEIGNLVFDKDDQLAVEFVTTAANIRASSFGIPLHSLFEAKGVAGNIVHAVA
Sbjct: 321 KLFFEKREKEIGNLVFDKDDQLAVEFVTTAANIRASSFGIPLHSLFEAKGVAGNIVHAVA 380
Query: 381 TTNAIIAGLIVIEAIKVLHGDYKKYR 406
TTNAIIAGLIVIEAIKVLHGDYKKYR
Sbjct: 381 TTNAIIAGLIVIEAIKVLHGDYKKYR 406
>Os01g0271500 Similar to RUB-activating enzyme (Ubiquitin activating enzyme
E1-like protein)
Length = 451
Score = 162 bits (410), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 85/201 (42%), Positives = 124/201 (61%), Gaps = 17/201 (8%)
Query: 21 LMVGAGGIGCELLKTLALSGFRDIHIIDLDTIEVSNLNRQFLFRQSHVGQSKAHVARDAV 80
L+VGAGG+GCELLK LALSGF++IH+ID+DTI+VSNLNRQFLFR VG+SKA VA V
Sbjct: 50 LVVGAGGLGCELLKDLALSGFKNIHVIDMDTIDVSNLNRQFLFRVQDVGKSKAEVAAKRV 109
Query: 81 LKFRPNINITSYHANVKDAQFNVEFFKQFNVVLNGLDNLDARRHVNRL-CLAAEV----- 134
++ +NI + ++D + +EF+ QF++++ GLD+++AR ++N + C E
Sbjct: 110 MERVSGVNIVPHFCRIEDKE--IEFYSQFSIIVLGLDSIEARSYINSVACGFLEYDSDDK 167
Query: 135 -------PLVESGTTGFLGQVTVHVKGKTECYECQPKPVPKS--YPVCTITSTPSKFVHC 185
P+V+ GT GF G V + G T C+EC P +P+CT+ TP HC
Sbjct: 168 PIPETLKPMVDGGTEGFKGHARVIIPGTTPCFECNIWLFPPQVKFPLCTLAETPRTAAHC 227
Query: 186 IVWAKELLFAKMFGDKNQDND 206
I +A + + ++ K D D
Sbjct: 228 IEYAHLIKWNEVHPGKPFDAD 248
>AK110124
Length = 657
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 113/356 (31%), Positives = 161/356 (45%), Gaps = 64/356 (17%)
Query: 21 LMVGAGGIGCELLKTLALSGFRD-----IHIIDLDTIEVSNLNRQFLFRQSHVGQSKAHV 75
+VG+G IGCE+LK ++ G IH+ D+DTIE SNLNRQFLFR VG KA
Sbjct: 76 FLVGSGAIGCEMLKNWSMMGLGSGPDGIIHVTDMDTIEKSNLNRQFLFRSKDVGHFKADT 135
Query: 76 ARDAVLKFRPNIN--ITSYHANVKDAQFNV---EFFKQFNVVLNGLDNLDARRHVNRLCL 130
A AV + P++ I S+ V +V EFF V N LDN+ AR++++R C+
Sbjct: 136 AAAAVAEMNPDLKGKIHSHQNRVGPETEDVYGDEFFASLTGVTNALDNVQARQYMDRRCV 195
Query: 131 AAEVPLVESGTTGFLGQVTVHVKGKTECYECQPKPVPKSYPVCTITSTPSKFVHCIVWAK 190
E PL+ESGT G V V TE Y P KS PVCT+ + P+ H I WA+
Sbjct: 196 YYEKPLLESGTLGTKANTQVVVPHLTESYSSSQDPPEKSIPVCTLKNFPNAIEHTIQWAR 255
Query: 191 ELLFAKMF--GDKNQDNDLNVRSNESGTSKSDVFERNADEDLDQYARRIYDH---VFGYN 245
E F ++F +N + L+ T KS A E LDQ + + D F
Sbjct: 256 E-QFDELFLKPAENVNAYLSQPDYIETTLKSG---SGAKEQLDQIKQYLVDERPKTFEQC 311
Query: 246 IEVA-LENEETWKNRRRPNPIYIRDTLPEEAIRQNGSSRDINNEQEEPSAMVSLGLRNPQ 304
I A + EE + N R + +LP +A+ +G Q
Sbjct: 312 IYWARMRFEENYSNVIR----QLLHSLPADAVTSSG-----------------------Q 344
Query: 305 EIWSLADNSRVFLEALKLFFEKREKEIGNLVFDKDDQLAVEFVTTAANIRASSFGI 360
WS ++ L F+ DD + +E+V + A + A ++G+
Sbjct: 345 PFWS-----------------GPKRAPKPLTFNVDDPMHLEYVMSGALLHAENYGL 383
>Os11g0106400 Similar to Ubiquitin-activating enzyme E1 2
Length = 1048
Score = 125 bits (313), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 105/359 (29%), Positives = 154/359 (42%), Gaps = 66/359 (18%)
Query: 21 LMVGAGGIGCELLKTLALSGFR-----DIHIIDLDTIEVSNLNRQFLFRQSHVGQSKAHV 75
MVG+G +GCE LK LAL G + + D D IE SNL+RQFLFR ++GQ K+ V
Sbjct: 464 FMVGSGALGCEFLKNLALMGISCNQNGKLIVTDDDVIEKSNLSRQFLFRDWNIGQPKSTV 523
Query: 76 ARDAVLKFRPNINITSYHANVKDAQ---FNVEFFKQFNVVLNGLDNLDARRHVNRLCLAA 132
A A + P +++ + FN F++ + V+N LDN+ AR +++ C+
Sbjct: 524 AATAAMAINPKLHVEALQNRASPETENVFNDAFWESLDAVVNALDNVTARMYIDSRCVYF 583
Query: 133 EVPLVESGTTGFLGQVTVHVKGKTECYECQPKPVPKSYPVCTITSTPSKFVHCIVWAK-- 190
+ PL+ESGT G + + TE Y P K P+CT+ S P HC+ WA+
Sbjct: 584 QKPLLESGTLGAKCNTQMVIPHLTENYGASRDPPEKQAPMCTVHSFPHNIDHCLTWARSE 643
Query: 191 -ELLFAKMFGDKNQDNDLNVRSNESG-----TSKSDVFERNADEDLDQYARRIYDHVFGY 244
E L K + N SN G + D R+ E + + R F
Sbjct: 644 FEGLLEKTPTEVNA-----FLSNPGGYATVARTAGDAQARDQLERVIECLEREKCETFQD 698
Query: 245 NIEVA-LENEETWKNRRRPNPIYIRDTLPEEAIRQNGSSRDINNEQEEPSAMVSLGLRNP 303
I A L+ E+ + NR + + T PE+A+ +G+
Sbjct: 699 CITWARLKFEDYFSNRVK----QLTYTFPEDAMTSSGAP--------------------- 733
Query: 304 QEIWSLADNSRVFLEALKLFFEKREKEIGNLVFDKDDQLAVEFVTTAANIRASSFGIPL 362
WS A K F E F D + F+ AA +RA +FGIP+
Sbjct: 734 --FWS----------APKRFPRPLE-------FLTSDPSQLNFILAAAILRAETFGIPI 773
>Os12g0105950 Similar to Ubiquitin-activating enzyme E1 2
Length = 310
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 65/178 (36%), Positives = 95/178 (53%), Gaps = 8/178 (4%)
Query: 21 LMVGAGGIGCELLKTLALSGFR-----DIHIIDLDTIEVSNLNRQFLFRQSHVGQSKAHV 75
MVG+G +GCE LK LAL G + + D D IE SNL+RQFLFR ++GQ K+ V
Sbjct: 68 FMVGSGALGCEFLKNLALMGISCNQNGKLTVTDDDVIEKSNLSRQFLFRDWNIGQPKSTV 127
Query: 76 ARDAVLKFRPNINITSYHANVKDAQ---FNVEFFKQFNVVLNGLDNLDARRHVNRLCLAA 132
A A + P +++ + FN F++ + V+N LDN+ AR +++ C+
Sbjct: 128 AATAAMAINPKLHVEALQNRASPETENVFNDAFWESLDAVVNALDNVTARMYIDSRCVYF 187
Query: 133 EVPLVESGTTGFLGQVTVHVKGKTECYECQPKPVPKSYPVCTITSTPSKFVHCIVWAK 190
+ PL+ESGT G + + TE Y P K P+CT+ S P HC+ WA+
Sbjct: 188 QKPLLESGTLGAKCNTQMVIPHLTENYGASRDPPEKQAPMCTVHSFPHNIDHCLTWAR 245
>Os07g0692900 Similar to Ubiquitin-activating enzyme E1 3
Length = 1045
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/193 (37%), Positives = 103/193 (53%), Gaps = 11/193 (5%)
Query: 21 LMVGAGGIGCELLKTLALSGFR-----DIHIIDLDTIEVSNLNRQFLFRQSHVGQSKAHV 75
+VG+G +GCE LK LAL G + I D D IE SNL+RQFLFR ++ Q+K+ V
Sbjct: 461 FVVGSGALGCEFLKNLALMGVSCSPKGKLTITDDDVIEKSNLSRQFLFRDWNIRQAKSTV 520
Query: 76 ARDAVLKFRPNINITSYHAN-VKDAQ--FNVEFFKQFNVVLNGLDNLDARRHVNRLCLAA 132
A A PN+ I + D + F+ F++ +VV+N LDN++AR +++ CL
Sbjct: 521 AAAAASAINPNLCIDALQNRACPDTENVFHDTFWEGLDVVINALDNVNARMYMDMRCLYF 580
Query: 133 EVPLVESGTTGFLGQVTVHVKGKTECYECQPKPVPKSYPVCTITSTPSKFVHCIVWAK-- 190
+ L+ESGT G + + TE Y P K P+CT+ S P HC+ WA+
Sbjct: 581 QKALLESGTLGAKCNTQMVIPHLTENYGASRDPPEKQAPMCTVHSFPHNIDHCLTWARSE 640
Query: 191 -ELLFAKMFGDKN 202
E L K G+ N
Sbjct: 641 FEGLLEKTPGEVN 653
>Os03g0294900 Similar to Ubiquitin-activating enzyme E1 3
Length = 1064
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 65/178 (36%), Positives = 99/178 (55%), Gaps = 8/178 (4%)
Query: 21 LMVGAGGIGCELLKTLALSGFR-----DIHIIDLDTIEVSNLNRQFLFRQSHVGQSKAHV 75
+VG+G +GCE LK LAL G + I D D IE SNL+RQFLFR ++GQ+K+ V
Sbjct: 480 FVVGSGALGCEFLKNLALMGVSCGLKGKLTITDDDIIEKSNLSRQFLFRDWNIGQAKSTV 539
Query: 76 ARDAVLKFRPNINITSYHANV---KDAQFNVEFFKQFNVVLNGLDNLDARRHVNRLCLAA 132
A A +++I + + F+ +F++ +V++N LDN++AR +++ CL
Sbjct: 540 AAAAASAINSSLHINALQNRACPETEHVFHDKFWEGLDVIINALDNVNARMYMDMRCLYF 599
Query: 133 EVPLVESGTTGFLGQVTVHVKGKTECYECQPKPVPKSYPVCTITSTPSKFVHCIVWAK 190
+ PL+ESGT G + + TE Y P K P+CT+ S P HC+ WA+
Sbjct: 600 QKPLLESGTLGPKCNTQMVIPHLTENYGASRDPPEKQAPMCTVHSFPHNIDHCLTWAR 657
>Os02g0525400 Similar to Molybdenum cofactor synthesis protein 3 (Molybdopterin
synthase sulfurylase) (MPT synthase sulfurylase)
Length = 274
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 83/169 (49%), Gaps = 16/169 (9%)
Query: 21 LMVGAGGIGCELLKTLALSGFRDIHIIDLDTIEVSNLNRQFLFRQSHVGQSKAHVARDAV 80
L+VGAGG+G + LA G + I+D D +E++NL+RQ + +++ VG+SK A DA
Sbjct: 104 LVVGAGGLGSPVALYLAACGVGCLGIVDGDDVELNNLHRQIIHKEAFVGKSKVKSAADAC 163
Query: 81 LKFRPNINITSYHANVKDAQFNVEFFKQFNVVLNGLDNLDARRHVNRLCLAAEVPLVESG 140
+ +IN+ YH +K + +E +++++V++ DNL R ++ C+ PL+
Sbjct: 164 REINSSINVMEYHHTLKPSN-ALEIVRKYDIVVDATDNLPTRYMISDCCVLLNKPLISGA 222
Query: 141 TTGFLGQVTVHVKGKTECYECQPKPVPKSYPVCTITSTPSKFVHCIVWA 189
G GQ + + P PKS T S P W
Sbjct: 223 ALGLEGQSMLSM------------PFPKST---TSGSLPEMLRQWSSWG 256
>Os02g0506500 Molybdenum cofactor biosynthesis domain containing protein
Length = 421
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 73/156 (46%), Gaps = 15/156 (9%)
Query: 22 MVGAGGIGCELLKTLALSGFRDIHIIDLDTIEVSNLNRQFLFRQSHVGQSKAHVARDAVL 81
+VG GG+G + L G + + D DT+E++N+NR F FR VG +K A +
Sbjct: 84 IVGIGGVGSVAAEMLTRCGIGRLLLYDYDTVELANMNRLF-FRPDQVGMTKTDAAVQTLS 142
Query: 82 KFRPNINITSYHANVKDAQFNVEFFKQF------------NVVLNGLDNLDARRHVNRLC 129
P++ + SY N+ + F ++VL+ +DN +AR VN+ C
Sbjct: 143 GINPDVTLESYSLNITTVKGFETFLGSLKARSSDGRNTGVDLVLSCVDNYEARMVVNQAC 202
Query: 130 LAAEVPLVESGTT--GFLGQVTVHVKGKTECYECQP 163
+ESG + G + + V G+T C+ C P
Sbjct: 203 NELGQTWMESGVSEDAVSGHIQLLVPGETACFACAP 238
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.320 0.136 0.396
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 12,573,714
Number of extensions: 518224
Number of successful extensions: 1376
Number of sequences better than 1.0e-10: 9
Number of HSP's gapped: 1361
Number of HSP's successfully gapped: 9
Length of query: 406
Length of database: 17,035,801
Length adjustment: 103
Effective length of query: 303
Effective length of database: 11,657,759
Effective search space: 3532300977
Effective search space used: 3532300977
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 157 (65.1 bits)