Os11g0106400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Ubiquitin-activating enzyme E1 2.
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Os11g0106400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Ubiquitin-activating enzyme E1 2.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 23.16 | 0.226 | 12.6 | 1.27 | 0.198 | -0.82 | 0.18 | 1.03 | 0.418 | 14.9 | 18.59 | 352 | -- | -- |
| 23.82 | 0.227 | 12.6 | 1.11 | 0.191 | -0.951 | 0.339 | -- | 0.381 | 15.1 | 14.84 | 369 | -- | -- |
| 23.24 | 0.225 | 12.6 | 1.29 | 0.195 | -0.836 | -- | 1.13 | 0.424 | 14.9 | 18.1 | 358 | -- | -- |
| 24.22 | 0.229 | 12.7 | 1.07 | 0.172 | -0.868 | -- | -- | 0.364 | 14.9 | 15.8 | 379 | -- | -- |
| 23.97 | 0.228 | 12.6 | 1.24 | -- | -0.78 | -- | 0.806 | 0.391 | -- | 16.53 | 647 | -- | -- |
| 33.55 | 0.272 | 12.7 | 0.882 | 0.166 | -- | 0.122 | -- | 0.231 | 8.62 | -- | -- | -- | -- |
| 33.59 | 0.271 | 12.7 | 0.886 | 0.167 | -- | -- | -- | 0.23 | 8.38 | -- | -- | -- | -- |
| 24.4 | 0.23 | 12.7 | 1.09 | -- | -0.769 | -- | -- | 0.357 | -- | 16.2 | 707 | -- | -- |
| 52.21 | 0.337 | 12.7 | -- | 0.102 | -0.413 | -- | -- | 0.184 | 10.6 | -4.562 | 391 | -- | -- |
| 35.15 | 0.277 | 12.7 | 0.887 | -- | -- | -- | -- | 0.232 | -- | -- | -- | -- | -- |
| 54.27 | 0.345 | 12.7 | -- | 0.172 | -- | -- | -- | 0.132 | 8 | -- | -- | -- | -- |
| 51.96 | 0.336 | 12.7 | -- | -- | -0.375 | -- | -- | 0.186 | -- | 21.1 | 541 | -- | -- |
| 55.88 | 0.349 | 12.7 | -- | -- | -- | -- | -- | 0.134 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 22.87 | temperature | 20 | 270 | > th | dose dependent | rect. | 22 | 22 |
| 2 | 22.88 | temperature | 20 | 720 | > th | dose dependent | rect. | 17 | 18 |
| 14 | 23.11 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 2 |
| 15 | 23.13 | temperature | 20 | 720 | > th | dose dependent | rect. | 19 | 16 |
| 18 | 23.19 | temperature | 20 | 720 | > th | dose dependent | rect. | 15 | 22 |
| 26 | 23.23 | temperature | 20 | 1440 | > th | dose dependent | rect. | 14 | 15 |
| 37 | 23.26 | temperature | 20 | 1440 | > th | dose dependent | rect. | 16 | 5 |
| 44 | 23.27 | temperature | 10 | 720 | > th | dose dependent | rect. | 17 | 18 |
| 69 | 23.33 | temperature | 20 | 1440 | > th | dose dependent | sin | 16 | NA |
| 84 | 23.35 | temperature | 20 | 720 | > th | dose dependent | sin | 9 | NA |
| 181 | 23.56 | temperature | 20 | 270 | > th | dose dependent | no | NA | NA |
| 209 | 23.61 | temperature | 25 | 1440 | > th | dose independent | rect. | 15 | 7 |
| 214 | 23.62 | temperature | 25 | 1440 | < th | dose independent | rect. | 15 | 7 |
| 219 | 23.62 | temperature | 20 | 270 | > th | dose dependent | rect. | 8 | 23 |
| 235 | 23.65 | temperature | 10 | 720 | > th | dose dependent | rect. | 6 | 23 |
| 242 | 23.66 | temperature | 30 | 720 | < th | dose dependent | rect. | 18 | 16 |
| 246 | 23.66 | temperature | 10 | 720 | > th | dose dependent | rect. | 23 | 19 |
| 251 | 23.67 | temperature | 25 | 1440 | < th | dose independent | sin | 17 | NA |
| 260 | 23.67 | temperature | 20 | 1440 | > th | dose dependent | rect. | 24 | 22 |
| 261 | 23.67 | temperature | 20 | 270 | > th | dose dependent | rect. | 10 | 23 |
| 266 | 23.68 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 2 |
| 280 | 23.69 | temperature | 25 | 1440 | < th | dose independent | rect. | 14 | 10 |
| 282 | 23.69 | temperature | 20 | 1440 | > th | dose dependent | no | NA | NA |
| 328 | 23.72 | temperature | 25 | 1440 | > th | dose independent | sin | 17 | NA |
| 340 | 23.72 | temperature | 20 | 270 | > th | dose dependent | rect. | 6 | 23 |
| 460 | 23.83 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 12 |
| 486 | 23.85 | temperature | 25 | 1440 | < th | dose independent | rect. | 10 | 16 |
| 512 | 23.87 | temperature | 25 | 1440 | < th | dose independent | rect. | 10 | 14 |
| 513 | 23.87 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 7 |
| 532 | 23.89 | temperature | 25 | 1440 | > th | dose independent | rect. | 10 | 16 |
| 534 | 23.89 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 9 |
| 540 | 23.90 | temperature | 25 | 1440 | > th | dose independent | rect. | 10 | 14 |
| 619 | 23.96 | wind | 9 | 43200 | > th | dose dependent | rect. | 19 | 2 |
| 641 | 23.98 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 3 |
| 644 | 23.98 | temperature | 30 | 720 | < th | dose dependent | sin | 10 | NA |
| 680 | 24.01 | temperature | 25 | 1440 | < th | dose independent | rect. | 19 | 1 |
| 704 | 24.02 | temperature | 20 | 30 | > th | dose dependent | rect. | 1 | 19 |
| 731 | 24.04 | temperature | 25 | 1440 | > th | dose independent | rect. | 19 | 1 |
| 844 | 24.10 | wind | 9 | 43200 | > th | dose independent | rect. | 19 | 2 |