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Os02g0506500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Molybdenum cofactor biosynthesis domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.49 (0.0202) R2 : 0.0952
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.295 (0.0425) R2dN8 : 0.123 R2N8 : 0.0952
σ : 0.381
deviance : 66.49
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
36.43 0.284 9.53 0.0269 0.516 0.564 -0.375 -0.431 0.186 2.12 19.11 2107 -- --
36.43 0.281 9.51 0.0883 0.489 0.71 -0.354 -- 0.215 1.96 18.5 2251 -- --
36.9 0.283 9.53 0.0302 0.505 0.56 -- -0.46 0.188 2.01 19.2 2262 -- --
36.84 0.283 9.51 0.0581 0.491 0.733 -- -- 0.2 2 18.3 2332 -- --
50.74 0.332 9.51 0.0118 -- 0.848 -- -0.0768 0.184 -- 18.3 2398 -- --
44.17 0.312 9.49 0.375 0.536 -- -0.396 -- 0.325 1.97 -- -- -- --
44.77 0.313 9.49 0.387 0.535 -- -- -- 0.328 1.9 -- -- -- --
50.74 0.332 9.52 0.00767 -- 0.882 -- -- 0.177 -- 18.3 2398 -- --
36.86 0.283 9.52 -- 0.488 0.774 -- -- 0.191 1.79 18.5 2664 -- --
62.07 0.368 9.48 0.409 -- -- -- -- 0.34 -- -- -- -- --
48.72 0.326 9.5 -- 0.542 -- -- -- 0.285 1.92 -- -- -- --
50.74 0.332 9.52 -- -- 0.891 -- -- 0.18 -- 18.31 2398 -- --
66.49 0.381 9.49 -- -- -- -- -- 0.295 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 33.54 radiation 1 1440 > th dose independent rect. 12 2
3 33.76 radiation 1 1440 < th dose independent rect. 12 2
5 33.76 radiation 1 1440 < th dose dependent rect. 12 2
25 34.44 wind 1 14400 > th dose independent rect. 24 2
35 34.80 wind 1 14400 < th dose independent rect. 24 2
37 34.88 wind 3 14400 < th dose dependent rect. 1 1
46 35.28 radiation 30 4320 < th dose independent rect. 6 2
47 35.28 radiation 30 4320 < th dose independent rect. 4 4
51 35.31 radiation 30 4320 < th dose independent rect. 19 13
53 35.32 temperature 20 1440 > th dose independent rect. 6 1
61 35.39 radiation 30 4320 < th dose independent rect. 23 9
69 35.59 radiation 20 1440 < th dose dependent rect. 11 1
70 35.59 radiation 20 4320 > th dose dependent rect. 16 16
72 35.61 temperature 20 1440 < th dose dependent rect. 3 1
73 35.65 temperature 20 1440 < th dose independent rect. 6 1
74 35.65 radiation 20 4320 > th dose dependent rect. 6 2
95 35.77 wind 9 43200 > th dose independent rect. 9 5
97 35.82 wind 1 43200 < th dose dependent rect. 12 1
100 35.85 atmosphere 995 43200 < th dose dependent rect. 11 19
104 35.87 wind 9 43200 < th dose independent rect. 9 5
105 35.87 humidity 90 4320 > th dose dependent rect. 7 3
106 35.87 humidity 50 14400 > th dose dependent rect. 2 5
109 35.89 temperature 20 1440 < th dose independent rect. 21 6
114 35.91 temperature 20 1440 < th dose independent rect. 22 3
123 35.94 temperature 20 1440 > th dose independent rect. 21 7
128 35.95 wind 9 43200 > th dose dependent rect. 10 4
130 35.96 wind 9 43200 > th dose dependent rect. 10 6
138 36.00 atmosphere 995 43200 < th dose dependent rect. 12 15
144 36.03 temperature 20 1440 < th dose independent rect. 21 11
146 36.04 temperature 20 1440 < th dose independent rect. 23 1
158 36.08 temperature 20 1440 > th dose independent rect. 21 11
177 36.11 atmosphere 995 43200 < th dose independent rect. 21 18
205 36.17 radiation 10 1440 < th dose independent rect. 13 5
213 36.19 wind 3 43200 < th dose independent rect. 6 1
225 36.20 wind 3 43200 > th dose independent rect. 6 1
231 36.21 atmosphere 995 43200 > th dose independent rect. 18 20
232 36.22 temperature 20 1440 < th dose independent sin 10 NA
233 36.22 temperature 20 14400 < th dose independent rect. 20 1
239 36.22 wind 3 43200 < th dose dependent rect. 6 1
248 36.23 atmosphere 995 43200 > th dose independent rect. 21 18
259 36.25 temperature 20 1440 > th dose independent sin 10 NA
263 36.26 atmosphere 995 43200 > th dose independent sin 6 NA
277 36.27 radiation 10 1440 < th dose independent rect. 13 8
301 36.31 temperature 20 14400 > th dose independent rect. 20 1
309 36.31 atmosphere 995 43200 < th dose dependent sin 16 NA
330 36.34 temperature 20 1440 > th dose independent rect. 1 3
360 36.36 temperature 20 1440 < th dose independent rect. 22 16
361 36.36 humidity 50 14400 > th dose dependent rect. 5 1
363 36.37 temperature 20 1440 > th dose independent rect. 3 1
367 36.37 wind 3 43200 > th dose independent rect. 18 14
385 36.38 atmosphere 995 43200 < th dose independent sin 6 NA
394 36.39 temperature 20 1440 < th dose independent rect. 3 1
402 36.39 wind 5 43200 < th dose dependent rect. 22 5
406 36.40 radiation 20 1440 < th dose independent rect. 11 1
428 36.42 temperature 20 1440 > th dose independent rect. 22 16
433 36.43 radiation 30 4320 > th dose independent rect. 7 1
469 36.44 wind 3 43200 < th dose independent rect. 18 13
502 36.47 temperature 20 1440 < th dose dependent rect. 12 18
560 36.52 wind 3 43200 > th dose independent rect. 20 7
562 36.52 wind 3 43200 < th dose independent rect. 20 7
578 36.53 temperature 20 1440 < th dose independent rect. 12 19
579 36.53 wind 1 43200 > th dose dependent rect. 1 1
596 36.54 wind 5 43200 < th dose dependent rect. 19 12
616 36.56 wind 3 43200 > th dose independent sin 11 NA
626 36.56 temperature 20 1440 > th dose independent rect. 12 19
631 36.56 wind 3 43200 < th dose dependent rect. 21 10
651 36.58 wind 9 43200 > th dose independent sin 1 NA
707 36.61 humidity 90 14400 > th dose dependent rect. 18 1
738 36.63 wind 3 43200 < th dose independent sin 11 NA
739 36.63 humidity 90 14400 > th dose independent rect. 9 1
768 36.64 humidity 90 720 > th dose dependent rect. 20 1
789 36.65 wind 9 43200 < th dose dependent rect. 6 1
793 36.66 humidity 90 14400 > th dose independent rect. 21 1
824 36.67 wind 3 43200 > th dose independent rect. 18 18
854 36.69 humidity 90 14400 > th dose independent rect. 13 1
864 36.69 wind 3 43200 < th dose independent rect. 18 18
880 36.70 wind 9 43200 < th dose independent sin 2 NA
911 36.71 wind 3 43200 < th dose independent rect. 20 19
916 36.71 wind 5 43200 < th dose dependent sin 11 NA
929 36.72 radiation 10 1440 < th dose independent sin 16 NA
943 36.72 wind 3 43200 > th dose independent rect. 20 19
949 36.72 wind 1 43200 > th dose dependent rect. 18 13
958 36.73 wind 3 43200 < th dose independent rect. 22 17
968 36.73 temperature 20 1440 < th dose dependent sin 11 NA
974 36.73 wind 9 43200 > th dose dependent rect. 10 20