BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os07g0554200 Os07g0554200|Os07g0554200
(409 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os07g0554200 Cyclin-like F-box domain containing protein 761 0.0
Os07g0554500 Cyclin-like F-box domain containing protein 508 e-144
Os07g0554100 184 1e-46
Os04g0258900 Cyclin-like F-box domain containing protein 164 1e-40
Os02g0199600 Cyclin-like F-box domain containing protein 148 8e-36
Os07g0554600 Conserved hypothetical protein 140 2e-33
Os07g0554900 Cyclin-like F-box domain containing protein 139 3e-33
Os10g0135300 Cyclin-like F-box domain containing protein 122 6e-28
Os07g0555000 Conserved hypothetical protein 101 9e-22
Os07g0555100 Conserved hypothetical protein 101 1e-21
Os10g0135400 Cyclin-like F-box domain containing protein 98 1e-20
Os07g0555300 Conserved hypothetical protein 85 8e-17
Os01g0382600 67 2e-11
>Os07g0554200 Cyclin-like F-box domain containing protein
Length = 409
Score = 761 bits (1964), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/409 (93%), Positives = 382/409 (93%)
Query: 1 MASPPAHRQLDALPDDLLAEVLIRLPSLADLGRACASCASFRRVVTDRAFLRRARALHPP 60
MASPPAHRQLDALPDDLLAEVLIRLPSLADLGRACASCASFRRVVTDRAFLRRARALHPP
Sbjct: 1 MASPPAHRQLDALPDDLLAEVLIRLPSLADLGRACASCASFRRVVTDRAFLRRARALHPP 60
Query: 61 SLLGFCGASPGAGGFXXXXXXXXXXXXXXXRGVLRAADFGFSFLPSPDPLGWVVRDVLGG 120
SLLGFCGASPGAGGF RGVLRAADFGFSFLPSPDPLGWVVRDVLGG
Sbjct: 61 SLLGFCGASPGAGGFHFHPAEPPHPSAPAARGVLRAADFGFSFLPSPDPLGWVVRDVLGG 120
Query: 121 RFLLDRDVVEEGAAAASRILAVCDPLFRRHLLLPQIPQDXXXXXXXXXXXXGDTFFAPIG 180
RFLLDRDVVEEGAAAASRILAVCDPLFRRHLLLPQIPQD GDTFFAPIG
Sbjct: 121 RFLLDRDVVEEGAAAASRILAVCDPLFRRHLLLPQIPQDLAAASALRQSRRGDTFFAPIG 180
Query: 181 EEECVAAVAETSFKVIWIAECADKLVAFVFSSVTGQWRATASVCWGDLSPAFSRPACRSM 240
EEECVAAVAETSFKVIWIAECADKLVAFVFSSVTGQWRATASVCWGDLSPAFSRPACRSM
Sbjct: 181 EEECVAAVAETSFKVIWIAECADKLVAFVFSSVTGQWRATASVCWGDLSPAFSRPACRSM 240
Query: 241 SRRSYAYGCFYWMMGDSVKNLLVLDMRRMDFSVLELPSSAPGHDIVECAIVEEGEGKIGM 300
SRRSYAYGCFYWMMGDSVKNLLVLDMRRMDFSVLELPSSAPGHDIVECAIVEEGEGKIGM
Sbjct: 241 SRRSYAYGCFYWMMGDSVKNLLVLDMRRMDFSVLELPSSAPGHDIVECAIVEEGEGKIGM 300
Query: 301 FAFRNYIAGYALQIYSAKMQNEGKAAAGKWSFETAMVVPFDEFGILGATSRELFLKVPPS 360
FAFRNYIAGYALQIYSAKMQNEGKAAAGKWSFETAMVVPFDEFGILGATSRELFLKVPPS
Sbjct: 301 FAFRNYIAGYALQIYSAKMQNEGKAAAGKWSFETAMVVPFDEFGILGATSRELFLKVPPS 360
Query: 361 FARGCYSLEFSTNPSCKYLESVRRVISGVPPSLSFLYVGYPPSLSSPSI 409
FARGCYSLEFSTNPSCKYLESVRRVISGVPPSLSFLYVGYPPSLSSPSI
Sbjct: 361 FARGCYSLEFSTNPSCKYLESVRRVISGVPPSLSFLYVGYPPSLSSPSI 409
>Os07g0554500 Cyclin-like F-box domain containing protein
Length = 414
Score = 508 bits (1309), Expect = e-144, Method: Compositional matrix adjust.
Identities = 299/425 (70%), Positives = 321/425 (75%), Gaps = 27/425 (6%)
Query: 1 MASP---PAHRQLD-----ALPDDLLAEVLIRLPSLADLGRACASCASFRRVVTDRAFLR 52
MASP HR+LD ALPDDLLAEVLIRLPSLADLGRA A+CASFRRV TD AFLR
Sbjct: 1 MASPARRSGHRRLDDTQELALPDDLLAEVLIRLPSLADLGRASAACASFRRVATDPAFLR 60
Query: 53 RARALHPPSLLGFCGASPGAGGFXXXXXXXXXXXXXXXRGVLRAADFGFSFLPSPDPLGW 112
RARALHPPSLLGFC ASPG GF R VLRAADFGFSFLPSP L W
Sbjct: 61 RARALHPPSLLGFC-ASPG--GFHPAEPPHPSAPAA--RAVLRAADFGFSFLPSP--LSW 113
Query: 113 VVRDVLGGRFLLDRDVVEEGAAAASRILAVCDPLFRRHLLLPQIPQDXXXXXX------X 166
VVRDVL GRFLLDRD E GAA RILAVCDPLFRR+ LLPQIP+D
Sbjct: 114 VVRDVLDGRFLLDRDGGEGGAAL--RILAVCDPLFRRYSLLPQIPEDLAASVRRRPRRGV 171
Query: 167 XXXXXGDTFFAPIGEEECVAAVAE-TSFKVIWIAECADKLVAFVFSSVTGQWRATASVCW 225
DTFFAPIGEEE AA TSFKVIWIA+C DKLVAFVFSSVTGQWRATAS CW
Sbjct: 172 APNGRFDTFFAPIGEEERAAAAVAETSFKVIWIAQCPDKLVAFVFSSVTGQWRATASPCW 231
Query: 226 GDLSPAFSRPACRSMSRRSYAYGCFYWMMGDSVKNLLVLDMRRMDFSVLELPSSAPGHDI 285
GDLSPAFSRPACRS+ RRSYAYGCFYWMMGDS NLLVLDM +M+FS+++LPSS PG DI
Sbjct: 232 GDLSPAFSRPACRSLLRRSYAYGCFYWMMGDS-GNLLVLDMCKMNFSIVKLPSSPPGRDI 290
Query: 286 VECAIVEEGEGKIGMFAFRNYIAGYALQIYSAKMQNEGKAAAGKWSFETAMVVPF-DEFG 344
VECAIVE GEGKIGMFAF N I YAL++YS MQNEG+ A+ KWSFE+A+++P D F
Sbjct: 291 VECAIVEAGEGKIGMFAFCNCIDIYALELYSTTMQNEGRVAS-KWSFESAILMPSRDGFR 349
Query: 345 ILGATSRELFLKVPPSFARGCYSLEFSTNPSCKYLESVRRVISGVPPSLSFLYVGYPPSL 404
+LG T +EL L+V P GCY LEFSTNPSCK LE VRRVI GV SL FLYVGYPPSL
Sbjct: 350 VLGVTGKELCLQVSPICVSGCYLLEFSTNPSCKKLEFVRRVIRGVRTSLPFLYVGYPPSL 409
Query: 405 SSPSI 409
SSPSI
Sbjct: 410 SSPSI 414
>Os07g0554100
Length = 396
Score = 184 bits (467), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 154/407 (37%), Positives = 190/407 (46%), Gaps = 58/407 (14%)
Query: 1 MASPPAHRQLDALPDDLLAEVLIRLPSLADLGRACASCASFRRVVT-DRAFLRRARALHP 59
MASP + AL +DL+AE+ +RLP+ DL RA A+C SFRR+VT DR+FLRR R+LH
Sbjct: 6 MASPSP--PVAALTNDLIAEIFLRLPTPEDLVRASAACVSFRRLVTTDRSFLRRFRSLHA 63
Query: 60 PSLLGFCGASPGAGGFXXXXXXXXXXXXXXXRGVLRAADFGFSFLPSPDPLGWVVRDVLG 119
P +GF GF SFLPSP W+VRDV G
Sbjct: 64 PPFVGFLDHR----GFHPALPPHPSAPVARAVADAADF--ALSFLPSPAG-SWMVRDVRG 116
Query: 120 GRFLLDRDVVEEGAAAASRI----LAVCDPLFRRHLLLPQIPQDXXXXXXXXXXXXGDT- 174
GR L+DRD E + + +AVCDPL RR LLLP IP D D
Sbjct: 117 GRVLVDRDTKAETGGSEKPLVFTEIAVCDPLRRRFLLLPPIPDDLAASVDRPVRVHLDRW 176
Query: 175 ---FFAPIGEEECVAAVAETSFKVIWIAECADKLVAFVFSSVTGQWRATASVCWGDL--- 228
F AP EEE +TSFKVIW+A+C K++AFVF+S TGQW A AS DL
Sbjct: 177 CEPFLAPHIEEE----EDDTSFKVIWMAQCKAKIIAFVFNSSTGQWLAGASPSTTDLFNG 232
Query: 229 -----------SPAFSRPACRSMSRRSYAYGCFYWMMGDSVKNLLVLDMRRMDFSVLELP 277
R S R YA GCF W + ++ LLVLD R M FS+ E P
Sbjct: 233 AGLSPPPSSSSPSLVFSSPGRVFSSRRYACGCFCWGILRTM--LLVLDTRLMKFSIAEPP 290
Query: 278 SSAPGHDIVECAIVEEGEGKIGMFAFRNYIAGYALQIYSAKMQNEGKAAAGKWSFETAMV 337
G AIVE GEG G+FA R + G YS GK A + + +
Sbjct: 291 PVCLGG---PTAIVEAGEGMTGIFALRGSVGGTFDLHYSIW----GKEGATRRE-QMEKI 342
Query: 338 VPFDE---FGILGATSRELFL---------KVPPSFARGCYSLEFST 372
+P D + I GA + L L P C+SL+ T
Sbjct: 343 IPLDHGYRYYIRGAMEKHLLLARSRGEGEEDTPEEPDLECFSLDVKT 389
>Os04g0258900 Cyclin-like F-box domain containing protein
Length = 408
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 142/422 (33%), Positives = 201/422 (47%), Gaps = 39/422 (9%)
Query: 10 LDALPDDLLAEVLIRLPSLADLGRACASCASFRRVVTDRAFLRRARALHPPSLLGFCGAS 69
L AL DD+LAE+L+R+PS DL RA A+C+SF R+ T FLRR R+LH P LG
Sbjct: 4 LPALTDDVLAEILVRVPSSCDLARASAACSSFCRIATSPRFLRRFRSLHAPLPLGVL-CP 62
Query: 70 PGAGGFXXXXXXXXXXXXXXXRGVLRAADFGFSFLPSPDPLGWVVRDVLGGRFLLDRDVV 129
GA F + FSFLP P W++RD GRFLLDR +
Sbjct: 63 DGAAAFHPAMPPHPSAPAARALALAADF--AFSFLPPP-ARAWLLRDHRDGRFLLDRALA 119
Query: 130 EEGAAAASRILAVCDPLFRRHLLLPQIPQDXXXXXXXXXXXXG----------DTFFAPI 179
G + A +AVCDPLFRR++LLP IP D G + F A
Sbjct: 120 --GGSTAFTDVAVCDPLFRRYVLLPPIPDDLAASVQNPYLQCGGDGGLQSRSSEIFLASC 177
Query: 180 GEEECVAAVAETSFKVIWIAECADKLVAFVFSSVTGQWRATASVCWGDLSPAFSRPACRS 239
G + A E F VIW+A C KLVAF FSS + QWRA + LS R
Sbjct: 178 GSD---AGGEEPLFAVIWMACCRGKLVAFFFSSESQQWRALSPPEHYALST--RRVMGVR 232
Query: 240 MSRRSYAYGCFYWMMGDSVKNLLVLDMRRMDFSVLELPSSAPGHDIV---ECAIVEEGEG 296
+ +R++A+GCFYWM+ LVLD RRM+F V+++ G ++ + +E +G
Sbjct: 233 LGQRNHAHGCFYWMI-TLTHRWLVLDTRRMEFLVVDISPVLSGRAMMFSNQIITLESMDG 291
Query: 297 KIGMFAFRNYIAGYALQIYSAKMQNEGKAAAGKWSFETAMVVP----FDEFGILGATSRE 352
+ + + +Y K + +W ++ + +P + GI+GA+
Sbjct: 292 WTIVVVADVFRSDKRCVLYFYKFMY----FSDRWQLQSKINLPEEWGYRFRGIIGASECY 347
Query: 353 LFLKVP-PSFARG----CYSLEFSTNPSCKYLESVRRVISGVPPSLSFLYVGYPPSLSSP 407
LF+K+ P G ++ F + L + SG S ++LY G+PPS S P
Sbjct: 348 LFIKLDHPKQNLGDPVQQNAMYFMFDIKTMQLGRFSEICSGT-VSEAYLYTGFPPSQSLP 406
Query: 408 SI 409
S+
Sbjct: 407 SV 408
>Os02g0199600 Cyclin-like F-box domain containing protein
Length = 434
Score = 148 bits (373), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 143/428 (33%), Positives = 204/428 (47%), Gaps = 40/428 (9%)
Query: 13 LPDDLLAEVLIRLPSLADLGRACASCASFRRVVTDRAFLRRARALH---PPSLLGFCGAS 69
+PDD++ E+L+RLPS + L RA A+C++FR +V+ FLRR RA H P +LLG S
Sbjct: 16 VPDDVVDEILVRLPSRSSLARAAAACSAFRALVSSPRFLRRHRARHGPCPGALLGSFAFS 75
Query: 70 PGAGGFXXXXXXXXXXXXXXXRGVLRAADFGFSFLPSP-----DP---LGWVVRDVLGGR 121
G F A PSP DP LGW+VRD GR
Sbjct: 76 SEGGAFHPAEPPHASAAAARA-VAAAADFSFAFLPPSPVVGDDDPRRGLGWIVRDHRDGR 134
Query: 122 FLLDRDVVEEGAAAASRILAVCDPLFRRHLLLPQIPQDXXXXXXXXXXXXG-----DTFF 176
FLLDR + LAVCDPL RR+++LP IP++ G + F
Sbjct: 135 FLLDRVASLDDNVFPE--LAVCDPLSRRYVVLPPIPRELAAAVDRPLGVIGGRRRCEPFL 192
Query: 177 APIGEEECVAAVAETSFKVIWIAECADKLVAFVFSSVTGQWRATAS---VCWGDLSPAFS 233
AP + A +E +F VIW A C K+VAF F+S G+WRA S W F
Sbjct: 193 APCDADADADAESEPAFAVIWTARCPRKVVAFAFASRDGRWRALPSPECFVWSRHRSPFG 252
Query: 234 RPACRSMSRRSYAYGCFYWMMGDSVKN-LLVLDMRRMDFSVLELPSSAPGHDIVECAIVE 292
P +RR YA+GCFYW+ D + + LVLD R M+ +V ++PS A + A+VE
Sbjct: 253 CPVHAVWNRRFYAHGCFYWL--DCLTHRWLVLDTRAMEITVKQIPSPACYWE-EHVAVVE 309
Query: 293 EGEGKIGMFAFRNYIAGYALQIYSAKMQNEGKAAAGKWSFETAMVVPF-----DEFGILG 347
+GK+G+FA Y AG +Y + + G +W E + +P+ + I
Sbjct: 310 GEDGKVGVFAHDFYRAGGEACLYYYTIVDGGDGP--RWRLERTVPLPWPAAHGRPYSIRA 367
Query: 348 ATSRELFLKV---PPSFARGCYSLE---FSTNPSCKYLESVRRVISGVPPSLSFLYVGYP 401
A + L L+V P+F S + + + LE + R +++ Y G+P
Sbjct: 368 AANGSLILEVSHGTPAFMTSYRSRDVELYRIDVKSFELEMICRARCAA-GDIAWAYFGFP 426
Query: 402 PSLSSPSI 409
P LS P++
Sbjct: 427 PLLSLPTV 434
>Os07g0554600 Conserved hypothetical protein
Length = 256
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 97/231 (41%), Positives = 118/231 (51%), Gaps = 17/231 (7%)
Query: 9 QLDALPDDLLAEVLIRLPSLADLGRACASCASFRRVVTDRAFLRRARALHPPSLLGFCGA 68
QLD L D+LL EV +RLP+ ADL RA + ASFRR++T AFLRR R LHPP +LG
Sbjct: 19 QLD-LTDELLEEVFVRLPTAADLARASTAFASFRRLITGHAFLRRFRRLHPPPVLGIL-- 75
Query: 69 SPGAGGFXXXXXXXXXXXXXXXRGVLRAADFGFSFLPSPDPLGWVVRDVLGGRFLL---- 124
A GF AADF SFLPS D W +R GR+LL
Sbjct: 76 ---AAGFLAAQPPHPSAAAARALADPDAADFSCSFLPSRD--RWCLRHFSDGRYLLSAIP 130
Query: 125 DRDVVEEGAAAASRILAVCDPLFRRHLLLPQIPQDXXXXXXXXXXXXGDTFFAPIGEEEC 184
+R A R AVCDPL+RR+LLLP IP D + F P E+E
Sbjct: 131 ERSDPAPDHRALVREFAVCDPLYRRYLLLPPIPDDLASVVNQSEIVNFEPFLCPATEDE- 189
Query: 185 VAAVAETSFKVIWIAECADKLVAFVFSSVTGQWRATASVCWGDLSPAFSRP 235
+T F+VI +A+C KLVAF +S +GQW A W DL+ S P
Sbjct: 190 ----EDTMFRVICLAQCEAKLVAFTYSRCSGQWHAVEFDGWRDLTRGTSNP 236
>Os07g0554900 Cyclin-like F-box domain containing protein
Length = 428
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 127/432 (29%), Positives = 185/432 (42%), Gaps = 58/432 (13%)
Query: 13 LPDDLLAEVLIRLPSLADLGRACASCASFRRVVTDRAFLRRARALHPPSLLGFCGASPGA 72
L DDLL E+ IRL + ADL RA +SC FRRV+TD +FLRR RAL+PP LLG A
Sbjct: 20 LTDDLLEEIFIRLDTPADLARASSSCPPFRRVITDPSFLRRYRALYPPPLLGILPRD--A 77
Query: 73 GGFXXXXXXXXXXXXXXXRGVLRAADFGFSFLPSPDPLGWVVRDVLGGRFLLDRDVV--- 129
F A D +FL PD W RDV GR L R+
Sbjct: 78 DAFLPAEPPHRSAPAAG------AVDLSCAFL--PDRHTWRRRDVRDGRILFSREEEYYA 129
Query: 130 --EEGAAAASRILAVCDPLFRRHLLLPQIPQDXXXXXXXXXXXX--GDTFFAP-IGEEEC 184
++GA LAVCDP R+ +L +IPQD + F AP ++
Sbjct: 130 PDDDGADVLLMDLAVCDPFSGRYAILTEIPQDLIDPLDLEGQSFLCFEPFLAPATAADDD 189
Query: 185 VAAVAETSFKVIWIAECADKLVAFVFSSVTGQWRATASVCWGDLSPAFSRPACRSMSRRS 244
V SF+V+++A KL+AF+F G+WRA W L S M R
Sbjct: 190 EDEVGGASFRVMYMARGLTKLMAFIFPWEAGEWRAVEYDGWAALINGTST-WLAEMFWRF 248
Query: 245 YAYGCFYWMMGDSVKNLLVLDMRRMDFSVLELPSSAPGHDIVECAIVEEGEGKIGMFAFR 304
+ +G W++ D LL+LD S +E+ + DIV +E EG++G+F
Sbjct: 249 HVHGNICWLL-DWANKLLILDTTTNQLSTIEMVPGSWKKDIV---FLETEEGQLGLFVLI 304
Query: 305 NYIAGYALQIYSAKMQNEGKAAAGKWSFETAMVVPFDEF--GILGATSRELFLKVPPSFA 362
N + +Y A Q+ K +W A+ +P + + +LG + L+ P +
Sbjct: 305 NNFYT-SFDLYYAIWQDNDKGVK-QWRVIEAIQLPLNYWYENLLGIDGGYVLLQGIPKGS 362
Query: 363 RG-------------------------CYSLEFSTNPSCKYLESVRRVISGVPPSLSFLY 397
+ C+S+E T ++ + + + + L+
Sbjct: 363 KSSWQASSRQNGSSQASESSSEVPEHVCFSVEVKTFRVERFCGTNHAIKT------ANLF 416
Query: 398 VGYPPSLSSPSI 409
YPPSLS P +
Sbjct: 417 TSYPPSLSPPRL 428
>Os10g0135300 Cyclin-like F-box domain containing protein
Length = 415
Score = 122 bits (305), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 102/296 (34%), Positives = 137/296 (46%), Gaps = 24/296 (8%)
Query: 15 DDLLAEVLIRLPSLADLGRACASCASFRRVVTDRAFLRRARALHPPSLLGFCGASPGAGG 74
D++L E+ +RL +L DL RA A+CA+FRR++T RAFLRR +LHP LLGF +
Sbjct: 24 DEVLEEIFLRLDALPDLARASAACATFRRLITARAFLRRLHSLHPRPLLGFFKREGPSCE 83
Query: 75 FXXXXXXXXXXXXXXXRGVLRAADFGFSFLPSPDPLGWVVRDVLGGRFLLDRDVVEEGAA 134
F AAD FSFLP+ P GW +R++ G LL + G
Sbjct: 84 FFPAAPPHSSSAAASA-VARGAADLTFSFLPA-TPGGWRLRNIRRGLALL--STRDGGGG 139
Query: 135 AASRILAVCDPLFRRHLLLPQIPQDXXXXXXXXXXXXG--DTFFAPIGEEECVAAVAETS 192
+ VCDPL RR+ +PQIP D D AP EE ++S
Sbjct: 140 CFFPDVVVCDPLHRRYAQIPQIPDDLAAPIRRSGSLPKGFDYLLAPARREEEEEEEEDSS 199
Query: 193 FKVI----WIAECADKLVAFVFSSVTGQWR-ATASVCWGDLSPAFSRPACRSMSRRSYAY 247
FKV+ EC + FVFSS G WR AT SRP C +
Sbjct: 200 FKVVCRPRLTEEC--DITVFVFSSGAGIWRAATLGSSLATAISVTSRPRC--------VH 249
Query: 248 GCFYWMMGDSVKNLLVLDMRRMDFSVLEL--PSSAPGHDIVECAIVEEGEGKIGMF 301
C YW+ + LL+LD M+ S+ + PS+ + AI E GE ++G+F
Sbjct: 250 RCVYWLT-RFLDRLLILDTDEMELSMFDNFPPSTGFVLNHTTAAIAEAGEDRLGVF 304
>Os07g0555000 Conserved hypothetical protein
Length = 207
Score = 101 bits (252), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 73/219 (33%), Positives = 111/219 (50%), Gaps = 17/219 (7%)
Query: 196 IWIAECADKLVAFVFSSVTGQWRATASVCWGDLSPAFSRPACRSMSRRSYAYGCFYWMMG 255
+++A C KLV F FSS T QW +T+ WG L A + ++++R +A+GC +W +
Sbjct: 1 MYMARCQSKLVVFTFSSDTQQWSSTSYDGWGILVAA-TPSQETALTQRHHAHGCIFWFL- 58
Query: 256 DSVKNLLVLDMRRMDFSVLELPSSAPGHDIVECAIVEEGEGKIGMFAFRNYIAGYALQIY 315
K LLVLD M+ S + LPSS +I + AIVE G IGMFA + I ++
Sbjct: 59 RWAKKLLVLDTFTMELSTINLPSSEL-IEIQQVAIVESARGGIGMFAMVDEILDSTFDMF 117
Query: 316 SAKMQNEGKAAAGKWSFETAMVVPFD-EFGILGATSRELFLK----VPPSFARGCYSLEF 370
EG A KW E M +P + + ++GA L ++ P + C+++E
Sbjct: 118 YVVWDPEG---ANKWPLERLMKLPVEFRYNLVGAAGGYLLVQGISVQGPVQDQVCFTVEL 174
Query: 371 STNPSCKYLESVRRVISGVPPSLSFLYVGYPPSLSSPSI 409
T + E+ RR + G L+ G+ PSLS PS+
Sbjct: 175 KTFKVEMFCET-RRTLIGAD-----LFAGFAPSLSPPSV 207
>Os07g0555100 Conserved hypothetical protein
Length = 402
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 85/273 (31%), Positives = 122/273 (44%), Gaps = 23/273 (8%)
Query: 95 RAADFGFSFLP---SPDPLGWVVRDVLGGRFLLDR----DVVEEGAAAASRIL--AVCDP 145
R ADF + F+P + GW D GR L+ D + G R + AVCDP
Sbjct: 77 RKADFEYGFVPWVPEEEAWGWFPLDARDGRVLIQSKYFPDDPDGGDFPRPRFMNYAVCDP 136
Query: 146 LFRRHLLLPQIPQDXXXXXXXXXXXXGDTFFAPIGEEECVAAVAETSFKVIWIAECADKL 205
LF+R+++LP +P D AP E+E A+TSF+VI +A L
Sbjct: 137 LFKRYVMLPPVPDDLTANEGSLVDFG--LCLAPSQEDE-----ADTSFRVICVARYNTNL 189
Query: 206 VAFVFSSVTGQWRATASVCWGDLSPAFSRPACRSMSRRSYAYGCFYWMMGDSVKNLLVLD 265
VAFVFSSVT QW +S W L P +S GCFYW + S +LVLD
Sbjct: 190 VAFVFSSVTRQWGIGSSSTWSSLGTE-EPPNRHGLSCFDCVDGCFYWTVP-SADKILVLD 247
Query: 266 MRRMDFSVLELPSSAPGHDIVECAIVEEGEGKIGMFAFRNYIAGYALQIYSAKMQNEGKA 325
+M+FSV+ D I + EG GM Y+ + Q++ ++
Sbjct: 248 AIKMEFSVINYAHRV--EDGFRACIAVDTEGTPGMLTVGEYLGNREFRFSRIAKQSDRES 305
Query: 326 AAGKWSFETAMVVP--FDEFGILGATSRELFLK 356
+ S E + +P +++ LGA +FL+
Sbjct: 306 PNERLS-ENIIQLPSNCNKYFTLGAAEGFIFLR 337
>Os10g0135400 Cyclin-like F-box domain containing protein
Length = 386
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 98/324 (30%), Positives = 134/324 (41%), Gaps = 50/324 (15%)
Query: 10 LDALPDDLLAEVLIRLPSLADLGRACASCASFRRVVTDRAFLRRARALHPPSLLGFCGAS 69
L LP++L+ E+LIRL LADL RA ++C RR++T RAFL R ALH LLG
Sbjct: 7 LTILPEELVVEILIRLTDLADLARAASACKPLRRLITSRAFLARLHALHAKPLLGLLLLE 66
Query: 70 PGAGGFXXXXXXXXXXXXXXXRGVLRAADFGFSFLPSPDPLGWVVRDVLGG-----RFLL 124
GF A+DF FSFLP GW +RDV G
Sbjct: 67 RDRCGFLPAATAVAAAVAR-------ASDFAFSFLPD-HAAGWRLRDVRHGLALLSSSSS 118
Query: 125 DRDVVEEGAAAASRILAVCDPLFRRHLLLPQIPQDXXXXXXXXXXXXGDTFFAPIGEEEC 184
+ G + VCDP+ RRH+ +P IP D D AP G +
Sbjct: 119 SSYLSPLGDRGFFPDVVVCDPMRRRHVRVPPIPDDLTAGVRRIAVEHFDYLLAPAGRD-- 176
Query: 185 VAAVAETSFKVIWIAECADKL------VAFVFSSVTGQWRATA-SVCWGDLSPAFSRPAC 237
+SF+V+ C KL FVFSS WRA C A
Sbjct: 177 -----GSSFRVV----CRPKLPKQCDVTVFVFSSGAAFWRAAVLDAC----------AAT 217
Query: 238 RSMSRRSYAYGCFYWMMGDSVKNLLVLDMRRMDFSVLELPSSAPGHDIVECAIVEEGE-G 296
+ +G YW S LL+LD R MDF + + ++ +C I E E G
Sbjct: 218 EKLFLPQSVHGYVYWRTHSS-GTLLMLDTRDMDFFFVNIQTN-------KCVIGEAEEVG 269
Query: 297 KIGMFAFRNYIAGYALQIYSAKMQ 320
++ +F + + ++I S ++
Sbjct: 270 RLAVFNTIVDVGVHKVEILSKAIR 293
>Os07g0555300 Conserved hypothetical protein
Length = 253
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 101/217 (46%), Gaps = 14/217 (6%)
Query: 140 LAVCDPLFRRHLLLPQIPQDXXXXXXXXXXXXGDTFFAPIGEEECVAAVAETSFKVIWIA 199
LAVCDP+ RR+++LP IP D +TF AP +EE V TSF+V+ A
Sbjct: 4 LAVCDPVSRRYVILPPIPDDLITSGEQEGLLVFETFLAPAAKEE-EEMVGTTSFRVVARA 62
Query: 200 ECADKLVAFVFSSVTGQWRATASVCWGDLS--PAFSRPACRSMSRRSYAYGCF-YWMMGD 256
K+V FVFSS+T +W ++ SV W L+ P S A + Y F YW+M
Sbjct: 63 NYESKVVIFVFSSLTEEWHSSRSVSWSLLTADPWLSSTAQAHLWFFPRYYAHFVYWVMH- 121
Query: 257 SVKNLLVLDMRRMDFSVLELPSSAPGHDIVECAIVEEGEGKIGMFAFRNYIAGYALQIYS 316
V LLVLD +M F + + AI+E E IG F + ++G Y
Sbjct: 122 LVDMLLVLDTSKMAFFTINFQWDR------DFAILETEEDMIGAFCLKGDLSGRTHLCYG 175
Query: 317 AKMQNEGKAAAGKWSFETA--MVVPFDE-FGILGATS 350
+ + A + + + + +P D + I+ AT
Sbjct: 176 TRRIDADFADSPPLNLDKTIPLPLPLDHCYHIINATQ 212
>Os01g0382600
Length = 401
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 125/326 (38%), Gaps = 33/326 (10%)
Query: 10 LDALPDDLLAEVLIRLPSLADLGRACASCASFRRVVTDRAFLRRARALHPPSLLGFCGAS 69
+D+L DD+L E+L+RLP +A L RA +CA R + + AFLRR R LH PSLLG
Sbjct: 26 IDSLNDDVLEEILVRLPCIASLARAACACARLRAIASSWAFLRRFRTLH-PSLLGHFATD 84
Query: 70 PGAGGFXXXXXXXXXXXXXXXRGVLRAADFGFSFLPSPDP-LGWVVRDVLGGRFLLDRDV 128
+R DF FL D GW V+D GR L
Sbjct: 85 ADDESVIPTFHPARAQFDGCSDAAVRGGDF---FLTRVDANAGWRVQDCRHGRLLF---- 137
Query: 129 VEEGAAAASRILAVCDPLFRRHLLLPQIPQDXXXXXXXXXXXXGDTFFAPIGEEECVAAV 188
A L V DPL RR + + + A G + C
Sbjct: 138 ------ANESDLLVYDPLSRRGVSIRR-------PSWYPSSHFTHCLLAGYGGDGCPG-- 182
Query: 189 AETSFKVIWIAECADKLV-AFVFSSVTGQWRATASVCWGDLSPAFSRPACRSMSRRSYAY 247
SF+V+ + ++ V+SS TG WR ++P RP+ S A
Sbjct: 183 ---SFRVVSVEHNGERAARGAVYSSCTGAWRRGRWDYDRVINP--KRPSEYSYFPGMQAA 237
Query: 248 GCFYWMMGDSVKNLLVLDMRRMDFSVLELPSSAPGHDIVECAIVEEGEGKIGMFAFRNYI 307
G YW D+ K L V D M FS + LP H + A+ E +G + +
Sbjct: 238 GRIYWKHRDTTK-LQVFDAGPMRFSYVHLPEGV--HPRSKYAVGEAEDGGCCLVVLADAP 294
Query: 308 AGYALQIYSAKMQNEGKAAAGKWSFE 333
G +++ + A W E
Sbjct: 295 HGTVFKVWRLRTGKGSWPWAWTWELE 320
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.325 0.139 0.437
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 14,925,276
Number of extensions: 606909
Number of successful extensions: 2201
Number of sequences better than 1.0e-10: 18
Number of HSP's gapped: 2156
Number of HSP's successfully gapped: 18
Length of query: 409
Length of database: 17,035,801
Length adjustment: 103
Effective length of query: 306
Effective length of database: 11,657,759
Effective search space: 3567274254
Effective search space used: 3567274254
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 157 (65.1 bits)