BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os07g0506600 Os07g0506600|AK072171
(797 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os07g0506600 Protein of unknown function DUF869, plant fami... 1411 0.0
Os11g0170200 Protein of unknown function DUF869, plant fami... 335 8e-92
Os12g0169100 Protein of unknown function DUF869, plant fami... 245 1e-64
Os03g0246500 Protein of unknown function DUF869, plant fami... 158 2e-38
Os04g0649200 Protein of unknown function DUF869, plant fami... 98 2e-20
Os10g0162400 Protein of unknown function DUF869, plant fami... 73 6e-13
>Os07g0506600 Protein of unknown function DUF869, plant family protein
Length = 797
Score = 1411 bits (3653), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 723/763 (94%), Positives = 723/763 (94%)
Query: 35 QDTXXXXXXXXXXXXXXXKEAQDDNVKVKVLSERLSSAVLDIRAKDDLVKQHSKVAEEAV 94
QDT KEAQDDNVKVKVLSERLSSAVLDIRAKDDLVKQHSKVAEEAV
Sbjct: 35 QDTPKSSPSSVQSPEISSKEAQDDNVKVKVLSERLSSAVLDIRAKDDLVKQHSKVAEEAV 94
Query: 95 LGWEKAEKEIASLKTQLNAATAKNSTLEDRIVHLDGALKECVRQLRRAKEELDHGIQDAL 154
LGWEKAEKEIASLKTQLNAATAKNSTLEDRIVHLDGALKECVRQLRRAKEELDHGIQDAL
Sbjct: 95 LGWEKAEKEIASLKTQLNAATAKNSTLEDRIVHLDGALKECVRQLRRAKEELDHGIQDAL 154
Query: 155 AQQSREWESEKADLELRVVELKAKLEAKSEFSVNAETDASSRLASLEKENSALKVQLLAM 214
AQQSREWESEKADLELRVVELKAKLEAKSEFSVNAETDASSRLASLEKENSALKVQLLAM
Sbjct: 155 AQQSREWESEKADLELRVVELKAKLEAKSEFSVNAETDASSRLASLEKENSALKVQLLAM 214
Query: 215 SEEVELRTIEKELNRRAAETASKQQLESIKKIAKLEAECRRLQANARRELKRAPSSVYAE 274
SEEVELRTIEKELNRRAAETASKQQLESIKKIAKLEAECRRLQANARRELKRAPSSVYAE
Sbjct: 215 SEEVELRTIEKELNRRAAETASKQQLESIKKIAKLEAECRRLQANARRELKRAPSSVYAE 274
Query: 275 SVTDCQSDCSDSWASILITELDQFKNDKSITRSASLAAADIGMMDDFLEMEKIASANSPS 334
SVTDCQSDCSDSWASILITELDQFKNDKSITRSASLAAADIGMMDDFLEMEKIASANSPS
Sbjct: 275 SVTDCQSDCSDSWASILITELDQFKNDKSITRSASLAAADIGMMDDFLEMEKIASANSPS 334
Query: 335 KSEAEDAASVQLVKLEEKIKRLAMEKADREKALHEAQRELRNTRHRAMVAEEKSVELQRQ 394
KSEAEDAASVQLVKLEEKIKRLAMEKADREKALHEAQRELRNTRHRAMVAEEKSVELQRQ
Sbjct: 335 KSEAEDAASVQLVKLEEKIKRLAMEKADREKALHEAQRELRNTRHRAMVAEEKSVELQRQ 394
Query: 395 LNLVKGVKHSMETEMEAMENRRNELEGRIELAHGEITSLLDKGRILEERLESEKALTLEL 454
LNLVKGVKHSMETEMEAMENRRNELEGRIELAHGEITSLLDKGRILEERLESEKALTLEL
Sbjct: 395 LNLVKGVKHSMETEMEAMENRRNELEGRIELAHGEITSLLDKGRILEERLESEKALTLEL 454
Query: 455 AAKYQQMDALEAERRELRGHLEASQSEAKNLGDKITXXXXXXXXXXAFSTRLAVRCHGIE 514
AAKYQQMDALEAERRELRGHLEASQSEAKNLGDKIT AFSTRLAVRCHGIE
Sbjct: 455 AAKYQQMDALEAERRELRGHLEASQSEAKNLGDKITLLEKKLEEEKAFSTRLAVRCHGIE 514
Query: 515 ALEEKKKGTEHELESAREEIASLQKKVSILELKIQEERALSEKLATRSCDLEALGVQTNE 574
ALEEKKKGTEHELESAREEIASLQKKVSILELKIQEERALSEKLATRSCDLEALGVQTNE
Sbjct: 515 ALEEKKKGTEHELESAREEIASLQKKVSILELKIQEERALSEKLATRSCDLEALGVQTNE 574
Query: 575 LRSQLQSANSEIAGLNEKVKMLEEAEEKHKPLTAGLESQLRLAQAEAMRLKDHVSSLEKK 634
LRSQLQSANSEIAGLNEKVKMLEEAEEKHKPLTAGLESQLRLAQAEAMRLKDHVSSLEKK
Sbjct: 575 LRSQLQSANSEIAGLNEKVKMLEEAEEKHKPLTAGLESQLRLAQAEAMRLKDHVSSLEKK 634
Query: 635 LESQKNLSSAYITALDASEAQKNKFASRFELKEAXXXXXXXXXXXXXXXIHKEKAQSSEL 694
LESQKNLSSAYITALDASEAQKNKFASRFELKEA IHKEKAQSSEL
Sbjct: 635 LESQKNLSSAYITALDASEAQKNKFASRFELKEAEVEELRRKIRLLEEEIHKEKAQSSEL 694
Query: 695 GVQCQNLKEQFTSRALSQPMKPMASKELHIKKEKELARAAGKLADCQKTIASLNRQLKSL 754
GVQCQNLKEQFTSRALSQPMKPMASKELHIKKEKELARAAGKLADCQKTIASLNRQLKSL
Sbjct: 695 GVQCQNLKEQFTSRALSQPMKPMASKELHIKKEKELARAAGKLADCQKTIASLNRQLKSL 754
Query: 755 ADFDEFVPGFENDSVIAEGWEENGLKLLNSANYPAQLGCLAVK 797
ADFDEFVPGFENDSVIAEGWEENGLKLLNSANYPAQLGCLAVK
Sbjct: 755 ADFDEFVPGFENDSVIAEGWEENGLKLLNSANYPAQLGCLAVK 797
>Os11g0170200 Protein of unknown function DUF869, plant family protein
Length = 901
Score = 335 bits (859), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 264/761 (34%), Positives = 412/761 (54%), Gaps = 89/761 (11%)
Query: 62 VKVLSERLSSAVLDIRAKDDLVKQHSKVAEEAVLGWEKAEKEIASLKTQLNAATAKNSTL 121
VK LSE+L+SA+L I AKDDLVKQH+KVAEEAV GWE+AE E+++LK L A+T KN++L
Sbjct: 85 VKSLSEKLASALLTINAKDDLVKQHTKVAEEAVAGWEQAEAEVSTLKRLLEASTQKNASL 144
Query: 122 EDRIVHLDGALKECVRQLRRAKEELDHGIQDALAQQSREWESEKADLELRVVELKAKLEA 181
+D++ HLD ALKECVRQLR+A+EE + I+DA+A++++E +S K++L+ + ELK +LEA
Sbjct: 145 DDQVNHLDDALKECVRQLRQAREEQEEKIRDAVAKKTQELDSHKSELQNHIYELKQQLEA 204
Query: 182 KS--EFSVNAETDASSRLASLEKENSALKVQLLAMSEEVELRTIEKELNRRAAETASKQQ 239
+V + D +L + EKEN LK++LL ++++++ ++E++L+ AAETASKQ
Sbjct: 205 AKLEAATVAVQHDLQDKLQAAEKENKGLKIELLTLAKDLKRLSLERDLSNEAAETASKQH 264
Query: 240 LESIKKIAKLEAECRRLQANARR-----ELKRAPSSVYAESVTDCQSDC----------- 283
LES+KKIA++EAECR+L+ RR + + AP++ ES+TD QSD
Sbjct: 265 LESVKKIARVEAECRKLRHLTRRTSLANDSRPAPNNACMESLTDSQSDSGERMLTVDSEM 324
Query: 284 --SDSWASILITELDQFKNDKSITRSASLAAADIGMMDDFLEMEKIA--------SANSP 333
SDSWAS LI ELDQFKN + +R +I +MDDFLEMEK+A S++
Sbjct: 325 RNSDSWASALIAELDQFKNSSASSRDVVNNHVEIDLMDDFLEMEKLAALSEVERVSSSFG 384
Query: 334 SKSEAEDAASV-------------QLVKLEEKIKRLAMEKADREKALHEAQRELRNTRHR 380
++++++ A ++ Q+ L+ K+++L EK D E AL EA+ +L +
Sbjct: 385 TETDSDQAVAIDKASKVETETLKSQVTDLQAKVEKLETEKRDLEMALAEARVQLDASCDA 444
Query: 381 AMVAEEKSVELQRQLNLVKGVKHSMETEMEAMENRRNELEGRIELAHGEITSLLDKGRIL 440
M A K ELQ Q NL K + + + ++ R L ++E E+ L L
Sbjct: 445 LMAANNKLAELQMQFNLANESKIAALGQADQLDAERGSLALQLESKSIEVEKLQAVVASL 504
Query: 441 EERLESEKALTLELAAKYQQMDALEAERRELRGHLEASQSEAKNLGDKITXXXXXXXXXX 500
EE +++EL LE++ E +L +
Sbjct: 505 EES----------------------TDKKELESQLESTSVELADLCKTVASLQEQIDAER 542
Query: 501 AFSTRLAVRCHGIEALEEKKKGTEHELESAREEIASLQKKVSILELKIQEERALSEKLAT 560
S + +A KK E +L+SA +I L+ + LE ++Q+E+ + E+L
Sbjct: 543 TLSLQHKAYADMADA---DKKSLEAQLQSAHADIGKLRGSIETLESELQKEKTMYEELVV 599
Query: 561 R--SCDLEA---LGVQTNE--LRSQLQSANSEIAGLNEKVKMLEEAEEKHKPLTA----- 608
+ S +E+ LGV++ + L ++L NSEIA L+ V LE K K ++
Sbjct: 600 QMESMKIESEKKLGVESAKEALEARLLVVNSEIAKLHGTVNDLECDAAKEKAFSSELKMQ 659
Query: 609 ---------GLESQLRLAQAEAMRLKDHVSSLEKKLESQKNLSSAYITALDASEAQKNKF 659
LES+L + E M+L++ +S LE +L+ Q L + + + +
Sbjct: 660 LEAVEGIRKMLESELESSHQETMKLQEKISLLEVRLKDQTALLVEFTAKAEDAAVGRKAM 719
Query: 660 ASRFELKEAXXXXXXXXXXXXXXXIHKEKAQSSELGVQCQNLKEQFTSRALSQPMKPMAS 719
+ E + I +EK S E +C+ L+ Q + + + +A+
Sbjct: 720 EGQLEGAKLEITKLTNRVSLLQGKIEQEKLLSEEYEAKCRKLEAQLSRDSREARLWRLAN 779
Query: 720 K--ELHIKKEKELARAAGKLADCQKTIASLNRQLKSLADFD 758
+L +K++KEL+ AAGKL +CQKTIA+L RQLKSL D D
Sbjct: 780 TNGDLKVKQDKELSSAAGKLVECQKTIANLGRQLKSLTDLD 820
>Os12g0169100 Protein of unknown function DUF869, plant family protein
Length = 1056
Score = 245 bits (625), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 239/746 (32%), Positives = 371/746 (49%), Gaps = 133/746 (17%)
Query: 55 AQDDNVK--VKVLSERLSSAVLDIRAKDDLVKQHSKVAEEAVLGWEKAEKEIASLKTQLN 112
+D++VK +K L+++L++A L I AK++LV+QH+KV EEAVLGWE+AE E+A+LK L
Sbjct: 106 VRDEDVKENLKSLNDKLAAAFLTINAKEELVRQHAKVTEEAVLGWEQAESEVAALKKLLE 165
Query: 113 AATAKNSTLEDRIVH--------------LDGALKECVRQLRRAKEELDHGIQDALAQQS 158
A+ KN +LE ++ H LD ALKECVRQL A+E+ + D + +S
Sbjct: 166 ASAQKNGSLEVQVSHLAEKNASLEVQVSRLDEALKECVRQLHLAQEDQAEKVHDVVT-KS 224
Query: 159 REWESEKADLELRVVELKAKLE-AKSEFS-VNAETDASSRLASLEKENSALKVQLLAMSE 216
+E ESE + L+ R+ ELK +LE K E S ++ + D + +++KEN LK +LL S+
Sbjct: 225 QELESENSKLQNRITELKKQLETTKLEASNMSIDHDLQEKFQAIKKENMDLKSKLLVQSK 284
Query: 217 EVELRTIEKELNRRAAETASKQQLESIKKIAKLEAECRRLQANARR-----ELKRAPSSV 271
++++ ++E++L+ +AAETASKQ LE++KKIA+LEAECRRL R+ + + ++
Sbjct: 285 DLKILSLERDLSNQAAETASKQHLENVKKIARLEAECRRLHHLTRKATLINDSRPLANNT 344
Query: 272 YAESVTDCQSDC-------------SDSWASILITELDQFKNDKSITRSASLAAADIGMM 318
ES+TD QSD SDSWAS L+ E DQFKN + ++ I +M
Sbjct: 345 CVESLTDSQSDSAERMAAVDNELRNSDSWASALVAEFDQFKNGNADEKNLVNNPVVIDLM 404
Query: 319 DDFLEMEKIA----------------------SANSPSKSEAEDAASVQLVKLEEKIKRL 356
DDFLEME++A + NS SK E E+ + Q+ L +++++
Sbjct: 405 DDFLEMERLAALPESDRTSSTFDMETDSDKAVTRNSSSKLETEELRN-QVADLHAQVEKI 463
Query: 357 AMEKADREKALHEAQRELRNTRHRAMVAEEKSVELQRQLNLVKGVKHSMETEMEAMENRR 416
EK + E AL EA+ +L + + + A+ + VE+Q +L+L KH + E + + +
Sbjct: 464 ESEKKELEMALMEARNQLDISCNALVAAKNRLVEMQMELDLANDSKHDALRDFEGLNSEK 523
Query: 417 NELEGRIELAHGEITSLLDKGRILEERLESEKALTLELAAKYQQMDALEAERRELRGHLE 476
LE ++E + LL LEE +++EL LE
Sbjct: 524 KALEFQLESKSVRVEELLQVVASLEEN----------------------TDKKELESQLE 561
Query: 477 ASQSEAKNLGDKITXXXXXXXXXXAFSTR----LAVRCHGIEALEEKKKGTEHELESARE 532
+EAK L +T + S + C+ E+LEE +L SA
Sbjct: 562 LLSAEAKELRLTVTSLLEKIEAERSLSVQHQAEAVAACNAKESLEE-------QLYSANT 614
Query: 533 EIASLQKKVSILELKIQEERALSEKLATRSCDLE-----ALGVQTNELRSQLQSANSEIA 587
E+ L V LE ++++E+ E+L +LE A+ L +QL +AN+E+
Sbjct: 615 EVERLHVIVKELEDEVEKEKMRQEELV---AELEMKMETAVEAIKESLEAQLCAANTEVE 671
Query: 588 GLNEKVKMLEEAEEK----HKPLTAGL-------------------ESQLRLAQAEAMRL 624
LN V+ LE EK HK LTA L E+QL + E ++L
Sbjct: 672 RLNSIVQALENDIEKEKALHKELTAQLEVKFEEEKARSVQTVKESMEAQLCSSNTEVLKL 731
Query: 625 KDHVSSLEKKLESQKNLSSAYITALDAS---------EAQKNKFASRFELKEAXXXXXXX 675
+D V +LE ++E +K L L+A EA K F S + +
Sbjct: 732 RDIVKALENEVEKEKALHEDLSAQLEAKIEAERTFSVEAIKESFQSELQSVNSEVVELRG 791
Query: 676 XXXXXXXXIHKEKAQSSELGVQCQNL 701
+ KEK S+EL +Q + L
Sbjct: 792 MVTALEHEVVKEKTFSAELQMQLEAL 817
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 108/382 (28%), Positives = 175/382 (45%), Gaps = 38/382 (9%)
Query: 414 NRRNELEGRIELAHGEITSLLDKGRILEERLESEKALTLELAAKYQ-QMD-ALEAERREL 471
N + LE ++ A+ E+ L + LE+ +E EK EL A+ + +M+ A+EA + L
Sbjct: 600 NAKESLEEQLYSANTEVERLHVIVKELEDEVEKEKMRQEELVAELEMKMETAVEAIKESL 659
Query: 472 RGHLEASQSEAKNLGDKITXXXXXXXXXXAFSTRLAVRCHGIEALEEK-------KKGTE 524
L A+ +E + L + A L + ++ EEK K+ E
Sbjct: 660 EAQLCAANTEVERLNSIVQALENDIEKEKALHKELTAQLE-VKFEEEKARSVQTVKESME 718
Query: 525 HELESAREEIASLQKKVSILELKIQEERALSEKL---------ATRSCDLEALGVQTNEL 575
+L S+ E+ L+ V LE ++++E+AL E L A R+ +EA+
Sbjct: 719 AQLCSSNTEVLKLRDIVKALENEVEKEKALHEDLSAQLEAKIEAERTFSVEAIK---ESF 775
Query: 576 RSQLQSANSEIAGLNEKVKMLEEAEEKHKPLTA--------------GLESQLRLAQAEA 621
+S+LQS NSE+ L V LE K K +A LES++ A +
Sbjct: 776 QSELQSVNSEVVELRGMVTALEHEVVKEKTFSAELQMQLEALEAIKRVLESEIESAHQDN 835
Query: 622 MRLKDHVSSLEKKLESQKNLSSAYITALDASEAQKNKFASRFELKEAXXXXXXXXXXXXX 681
+L D V S E KL+ Q + + + +A ++++ + E +
Sbjct: 836 RKLNDKVKSFEAKLKKQVSSAVDFTAKEEAMQSERRAMKQQLEAAKMEVGKLTNKVSLLQ 895
Query: 682 XXIHKEKAQSSELGVQCQNLKEQFTSRALSQPMKPMASKE--LHIKKEKELARAAGKLAD 739
+ +E+ S E + L+ + + + + +A+ L K+EKELA AAGKLA+
Sbjct: 896 GEVLQERLLSEEFEQEYHKLEARLSRDSRDAKLWRLANSNGGLKAKQEKELANAAGKLAE 955
Query: 740 CQKTIASLNRQLKSLADFDEFV 761
CQKTIASL RQLKSL D D +
Sbjct: 956 CQKTIASLGRQLKSLTDIDNTI 977
>Os03g0246500 Protein of unknown function DUF869, plant family protein
Length = 1040
Score = 158 bits (399), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 105/293 (35%), Positives = 158/293 (53%), Gaps = 34/293 (11%)
Query: 1 MDRRSWLWRRRSTEKXXXXXXXXXXXXXXXXXXXQDTXXXXXXXXXXXXXXXKEAQDDNV 60
MDRRSW W+++S++K ++ + N
Sbjct: 1 MDRRSWPWKKKSSDKSSSADASQNSNQAEQDDKAPKYVQISPETYAHLTESEEQVKTLNE 60
Query: 61 KVKVLSERLSSAVLDIRAKDDLVKQHSKVAEEAVLGWEKAEKEIASLKTQLNAATAKNST 120
KVK L+E LS+A +I KD LVKQH+KVAEEAV GWEKAE E ++LK QL T
Sbjct: 61 KVKALNEDLSAAQSEITTKDALVKQHAKVAEEAVSGWEKAEAEASALKLQLETVTLAKLA 120
Query: 121 LEDRIVHLDGALKECVRQLRRAKEELDHGIQDALAQQSREWESEKADLELRVVELKAKLE 180
E+R HLDGALKEC++Q+R KEE + + D + ++++WE KA+ E +++E + +L
Sbjct: 121 AEERAAHLDGALKECMKQVRTVKEEGEQKLHDVVFAKTKQWEKIKAEFEAKLLEFEQEL- 179
Query: 181 AKSEFSVNAETDASSR-----------------------------LASLEKENSALKVQL 211
AE DA SR + S E+E ++LK ++
Sbjct: 180 ----IRAGAENDALSRSLEERGDLLMKIDEEKARAEAEIEVLKNTIQSGEREINSLKYEI 235
Query: 212 LAMSEEVELRTIEKELNRRAAETASKQQLESIKKIAKLEAECRRLQANARREL 264
+S+E+E+R EK ++ R+A+ A+KQ +E +KKI+KLEAEC+RL+ R++L
Sbjct: 236 HVVSKELEIRNEEKNMSVRSADVATKQHMEDVKKISKLEAECQRLRGLVRKKL 288
>Os04g0649200 Protein of unknown function DUF869, plant family protein
Length = 916
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 149/296 (50%), Gaps = 55/296 (18%)
Query: 1 MDRRSWLWRRRSTEKXXXXXXXXXXXXXXXXXXXQDTXXXXXXXXXXXXXXXKEAQDDNV 60
MD ++WLWR++S+E+ +E + + +
Sbjct: 1 MDNKTWLWRKKSSERTISTKNKANISE-------------------------REQEKEKI 35
Query: 61 -----KVKVLSERLSSAVLDIRAKDDLVKQHSKVAEEAVLGWEKAEKEIASLKTQLNAAT 115
++ L+E++S A + KD ++ + +KVAEEA+LGWEKAE E ++KTQL+
Sbjct: 36 ARLERSLQCLNEQISFAQAECVEKDAILAKQAKVAEEAILGWEKAEGEAIAIKTQLDDTL 95
Query: 116 AKNSTLEDRIVHLDGALKECVRQ----LRRAKEELDH----------------GIQDALA 155
+ + +E RI HLD AL + + ++ + + H I +L
Sbjct: 96 DQKAAIEQRICHLDEALNVAMVERELLIKDTAKLISHEQVKVERLEGDVVEKINIIASLD 155
Query: 156 QQSREWESEKADLELRVVELKAKLEAKSEFSVNAETDASSRLASLEKENSALKVQLLAMS 215
++R+ + E + EL EAK N + + +L S +K NS+L+ ++ +
Sbjct: 156 AENRKLSEMLSMKEKMISELT---EAKGVIESNFK-NLEVKLESADKLNSSLRYEVCMLQ 211
Query: 216 EEVELRTIEKELNRRAAETASKQQLESIKKIAKLEAECRRLQANARRELKRAPSSV 271
+++++R+ E++ N ++A+ A KQ LE++KKI KLEAEC+RL++ R+ L P+++
Sbjct: 212 KQLDIRSEERKFNLKSADAAHKQHLENVKKITKLEAECQRLRSMVRKRLP-GPAAI 266
>Os10g0162400 Protein of unknown function DUF869, plant family protein
Length = 904
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 81/152 (53%), Gaps = 34/152 (22%)
Query: 142 AKEELDHGIQDALAQQSREWESEKADLELRVVELKAKLEAKSEFSVNAETDASSR----- 196
KEE + +QD + ++++WE KA+LE ++ + +L AE DA SR
Sbjct: 1 VKEESEQKLQDVVFAKTKQWEMMKAELEAKLASFEHEL-----IRAGAENDALSRSLEER 55
Query: 197 ------------------------LASLEKENSALKVQLLAMSEEVELRTIEKELNRRAA 232
+ S EKE S+LK +L +S+E E+R EK ++ R+A
Sbjct: 56 EHLMMKVGGEKEQAESQIEVLKGTIQSGEKEISSLKYELHVLSKEFEIRNEEKNMSVRSA 115
Query: 233 ETASKQQLESIKKIAKLEAECRRLQANARREL 264
+ A+KQ +E +KKI+KLEAEC+RL+ R++L
Sbjct: 116 DVATKQHVEDVKKISKLEAECQRLRGLVRKKL 147
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.309 0.123 0.317
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 19,126,404
Number of extensions: 656728
Number of successful extensions: 4840
Number of sequences better than 1.0e-10: 15
Number of HSP's gapped: 4723
Number of HSP's successfully gapped: 19
Length of query: 797
Length of database: 17,035,801
Length adjustment: 109
Effective length of query: 688
Effective length of database: 11,344,475
Effective search space: 7804998800
Effective search space used: 7804998800
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 160 (66.2 bits)