Os04g0649200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF869, plant family protein.
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Os04g0649200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF869, plant family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 171.8 | 0.616 | 7.38 | 1.52 | 1.8 | -0.775 | 0.303 | 0.395 | 0.331 | 22.4 | 20 | 29 | -- | -- |
| 171.46 | 0.61 | 7.38 | 1.53 | 1.86 | -0.887 | 0.338 | -- | 0.341 | 22.4 | 20.1 | 168 | -- | -- |
| 172.13 | 0.611 | 7.38 | 1.49 | 1.8 | -0.78 | -- | 0.313 | 0.328 | 22.4 | 20.06 | 31 | -- | -- |
| 171.61 | 0.61 | 7.39 | 1.48 | 1.84 | -0.878 | -- | -- | 0.334 | 22.3 | 20.3 | 180 | -- | -- |
| 360.39 | 0.884 | 7.32 | 1.66 | -- | -1.22 | -- | 0.303 | 0.422 | -- | 20.4 | 36 | -- | -- |
| 197.51 | 0.659 | 7.43 | 1.24 | 1.94 | -- | 0.167 | -- | 0.171 | 22.6 | -- | -- | -- | -- |
| 197.63 | 0.658 | 7.43 | 1.23 | 1.94 | -- | -- | -- | 0.171 | 22.6 | -- | -- | -- | -- |
| 360.42 | 0.884 | 7.32 | 1.59 | -- | -1.24 | -- | -- | 0.409 | -- | 20.3 | 44 | -- | -- |
| 225.27 | 0.703 | 7.44 | -- | 1.84 | -0.521 | -- | -- | 0.12 | 22.5 | 20.6 | 150 | -- | -- |
| 428.27 | 0.967 | 7.38 | 1.26 | -- | -- | -- | -- | 0.18 | -- | -- | -- | -- | -- |
| 237.41 | 0.721 | 7.46 | -- | 1.94 | -- | -- | -- | 0.0339 | 22.7 | -- | -- | -- | -- |
| 423.54 | 0.962 | 7.37 | -- | -- | -0.983 | -- | -- | 0.2 | -- | 20.59 | 14 | -- | -- |
| 470.47 | 1.01 | 7.41 | -- | -- | -- | -- | -- | 0.04 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 161.39 | temperature | 20.0 | 90 | > th | dose independent | sin | 9 | NA |
| 2 | 161.57 | temperature | 20.0 | 90 | < th | dose independent | rect. | 23 | 9 |
| 5 | 162.21 | temperature | 20.0 | 270 | > th | dose independent | rect. | 18 | 13 |
| 9 | 163.07 | temperature | 20.0 | 90 | > th | dose independent | rect. | 20 | 13 |
| 22 | 164.26 | temperature | 20.0 | 90 | < th | dose independent | rect. | 13 | 19 |
| 35 | 164.95 | temperature | 20.0 | 90 | < th | dose independent | rect. | 15 | 17 |
| 44 | 165.47 | temperature | 20.0 | 90 | < th | dose independent | sin | 8 | NA |
| 49 | 165.59 | temperature | 20.0 | 90 | < th | dose independent | rect. | 17 | 15 |
| 54 | 165.82 | wind | 7.0 | 4320 | > th | dose independent | rect. | 17 | 4 |
| 63 | 166.00 | temperature | 20.0 | 90 | < th | dose independent | rect. | 19 | 13 |
| 83 | 166.50 | wind | 7.0 | 4320 | > th | dose dependent | rect. | 17 | 4 |
| 111 | 167.16 | wind | 7.0 | 4320 | > th | dose dependent | rect. | 17 | 1 |
| 122 | 167.32 | wind | 7.0 | 4320 | < th | dose independent | rect. | 17 | 4 |
| 124 | 167.36 | wind | 9.0 | 4320 | > th | dose independent | rect. | 17 | 1 |
| 188 | 168.13 | wind | 9.0 | 4320 | < th | dose independent | rect. | 17 | 1 |
| 282 | 169.12 | wind | 7.0 | 4320 | > th | dose independent | rect. | 15 | 10 |
| 322 | 169.46 | wind | 7.0 | 4320 | > th | dose dependent | rect. | 15 | 10 |
| 342 | 169.60 | temperature | 20.0 | 90 | < th | dose independent | rect. | 23 | 20 |
| 361 | 169.76 | wind | 7.0 | 4320 | < th | dose independent | rect. | 15 | 10 |
| 450 | 170.39 | temperature | 20.0 | 90 | > th | dose independent | rect. | 17 | 23 |
| 467 | 170.48 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 13 | 2 |
| 468 | 170.48 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 13 | 2 |
| 475 | 170.50 | temperature | 20.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 524 | 170.83 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 9 | 6 |
| 526 | 170.83 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 9 | 6 |
| 536 | 170.90 | temperature | 20.0 | 30 | > th | dose independent | rect. | 5 | 23 |
| 543 | 170.95 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 11 | 4 |
| 546 | 170.95 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 11 | 4 |
| 581 | 171.15 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 13 | 2 |
| 613 | 171.39 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 9 | 1 |
| 614 | 171.39 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 9 | 1 |
| 660 | 171.63 | temperature | 20.0 | 30 | > th | dose independent | rect. | 1 | 23 |
| 673 | 171.75 | temperature | 20.0 | 90 | > th | dose independent | rect. | 19 | 20 |
| 680 | 171.80 | temperature | 20.0 | 30 | > th | dose independent | no | NA | NA |
| 683 | 171.81 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 11 | 2 |
| 690 | 171.84 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 11 | 4 |
| 702 | 171.94 | temperature | 20.0 | 720 | > th | dose independent | rect. | 19 | 5 |
| 719 | 172.04 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 11 | 2 |
| 726 | 172.08 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 9 | 6 |
| 744 | 172.21 | radiation | 10.0 | 720 | < th | dose independent | rect. | 14 | 9 |
| 764 | 172.36 | wind | 5.0 | 4320 | < th | dose independent | rect. | 21 | 1 |
| 767 | 172.37 | temperature | 20.0 | 90 | < th | dose independent | no | NA | NA |
| 772 | 172.41 | temperature | 20.0 | 90 | < th | dose independent | rect. | 15 | 23 |
| 774 | 172.43 | wind | 5.0 | 4320 | > th | dose independent | rect. | 21 | 1 |
| 787 | 172.49 | temperature | 20.0 | 90 | < th | dose independent | rect. | 17 | 23 |
| 814 | 172.62 | wind | 5.0 | 720 | > th | dose independent | rect. | 21 | 1 |
| 834 | 172.66 | radiation | 10.0 | 4320 | < th | dose dependent | rect. | 24 | 5 |
| 869 | 172.80 | temperature | 20.0 | 30 | < th | dose independent | rect. | 1 | 23 |
| 882 | 172.84 | radiation | 10.0 | 4320 | < th | dose dependent | rect. | 3 | 2 |
| 885 | 172.85 | temperature | 20.0 | 30 | < th | dose independent | rect. | 5 | 23 |
| 894 | 172.88 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 2 | 2 |
| 897 | 172.89 | temperature | 20.0 | 90 | > th | dose independent | rect. | 11 | 23 |
| 898 | 172.89 | temperature | 20.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 907 | 172.95 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 2 | 2 |
| 933 | 173.04 | temperature | 20.0 | 30 | < th | dose independent | rect. | 7 | 23 |
| 955 | 173.18 | temperature | 20.0 | 270 | > th | dose independent | rect. | 1 | 23 |
| 958 | 173.20 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 9 | 1 |
| 988 | 173.34 | wind | 7.0 | 4320 | > th | dose independent | sin | 14 | NA |