Os07g0506600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF869, plant family protein.
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Os07g0506600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF869, plant family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 163.53 | 0.601 | 6.01 | -0.147 | 0.338 | -1.59 | -0.721 | -2.06 | 0.473 | 19.4 | 24.28 | 494 | -- | -- |
| 166.62 | 0.601 | 6.05 | -0.457 | 0.123 | -1.46 | -0.561 | -- | 0.413 | 19.5 | 31.26 | 572 | -- | -- |
| 164.62 | 0.598 | 6.01 | -0.199 | 0.354 | -1.55 | -- | -1.71 | 0.467 | 18.6 | 24.3 | 537 | -- | -- |
| 166.86 | 0.602 | 6.05 | -0.477 | 0.161 | -1.5 | -- | -- | 0.4 | 16.8 | 30.96 | 670 | -- | -- |
| 166.4 | 0.601 | 6.03 | -0.275 | -- | -1.57 | -- | -1.29 | 0.41 | -- | 28.82 | 563 | -- | -- |
| 195.3 | 0.655 | 6 | -0.104 | 0.494 | -- | -0.301 | -- | 0.671 | 19.2 | -- | -- | -- | -- |
| 195.53 | 0.655 | 6 | -0.0971 | 0.494 | -- | -- | -- | 0.671 | 19.1 | -- | -- | -- | -- |
| 167.64 | 0.603 | 6.05 | -0.501 | -- | -1.58 | -- | -- | 0.378 | -- | 30.78 | 572 | -- | -- |
| 172.25 | 0.611 | 6.02 | -- | 0.245 | -1.27 | -- | -- | 0.505 | 17.3 | 32.17 | 708 | -- | -- |
| 208.43 | 0.675 | 5.98 | -0.106 | -- | -- | -- | -- | 0.662 | -- | -- | -- | -- | -- |
| 195.78 | 0.655 | 5.99 | -- | 0.495 | -- | -- | -- | 0.681 | 19.1 | -- | -- | -- | -- |
| 173.52 | 0.614 | 6.03 | -- | -- | -1.42 | -- | -- | 0.474 | -- | 31.77 | 548 | -- | -- |
| 208.73 | 0.674 | 5.98 | -- | -- | -- | -- | -- | 0.674 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 158.98 | temperature | 30 | 720 | < th | dose dependent | rect. | 18 | 18 |
| 5 | 159.20 | temperature | 10 | 720 | > th | dose dependent | rect. | 17 | 16 |
| 6 | 159.33 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 14 |
| 32 | 160.20 | temperature | 10 | 720 | > th | dose dependent | sin | 9 | NA |
| 42 | 160.56 | temperature | 30 | 720 | < th | dose dependent | sin | 10 | NA |
| 88 | 161.63 | temperature | 25 | 270 | < th | dose dependent | sin | 3 | NA |
| 117 | 162.16 | temperature | 25 | 270 | < th | dose dependent | rect. | 23 | 21 |
| 126 | 162.34 | temperature | 15 | 1440 | > th | dose dependent | rect. | 17 | 5 |
| 189 | 163.00 | temperature | 15 | 720 | > th | dose dependent | rect. | 21 | 22 |
| 196 | 163.06 | temperature | 25 | 270 | < th | dose dependent | rect. | 23 | 17 |
| 203 | 163.13 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 5 |
| 210 | 163.15 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 23 |
| 254 | 163.33 | temperature | 30 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 288 | 163.53 | temperature | 30 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 293 | 163.54 | temperature | 30 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 296 | 163.57 | temperature | 15 | 1440 | > th | dose dependent | rect. | 21 | 1 |
| 309 | 163.65 | temperature | 20 | 270 | > th | dose dependent | rect. | 1 | 8 |
| 317 | 163.67 | temperature | 30 | 720 | < th | dose dependent | rect. | 8 | 22 |
| 413 | 164.11 | temperature | 20 | 30 | > th | dose dependent | rect. | 3 | 19 |
| 459 | 164.36 | temperature | 25 | 270 | < th | dose dependent | rect. | 1 | 14 |
| 529 | 164.63 | temperature | 25 | 270 | < th | dose dependent | rect. | 3 | 12 |
| 587 | 164.81 | temperature | 10 | 720 | > th | dose dependent | rect. | 1 | 23 |
| 591 | 164.83 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 8 |
| 656 | 165.04 | temperature | 30 | 30 | < th | dose dependent | rect. | 7 | 23 |
| 666 | 165.06 | temperature | 30 | 720 | < th | dose dependent | rect. | 5 | 23 |
| 690 | 165.11 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 833 | 165.58 | temperature | 30 | 90 | < th | dose dependent | rect. | 17 | 23 |
| 847 | 165.64 | temperature | 20 | 1440 | > th | dose dependent | sin | 15 | NA |
| 867 | 165.67 | temperature | 30 | 10 | < th | dose dependent | rect. | 18 | 22 |
| 877 | 165.70 | temperature | 10 | 720 | > th | dose dependent | no | NA | NA |
| 898 | 165.76 | temperature | 10 | 720 | > th | dose dependent | rect. | 6 | 23 |
| 911 | 165.82 | humidity | 70 | 720 | > th | dose independent | rect. | 17 | 4 |
| 919 | 165.83 | temperature | 30 | 90 | < th | dose dependent | rect. | 19 | 22 |