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Os03g0246500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Protein of unknown function DUF869, plant family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.71 (0.0637) R2 : 0.616
β1 : -5.91 (0.241) R2dD : 0.56 R2D : 0.325
β2 : 1.11 (0.165) R2dC : 0.0389 R2C : 0.0364
β3 : 2.44 (0.185) R2dE : 0.16 R2E : 0.0211
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -1.12 (0.136) R2dN8 : 0.0763 R2N8 : -0.0172
σ : 1.19
deviance : 654.96
__
_____
C
peak time of C : 4.29
E
wheather : temperature
threshold : 26.2
memory length : 1276
response mode : > th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
642.27 1.19 7.83 -6.87 1.11 2.86 1.96 -4.02 -1.32 4.57 26.23 1268 -- --
646.24 1.18 7.71 -5.89 1.1 2.44 1.84 -- -1.1 4.53 26.15 1271 -- --
652.15 1.19 7.82 -6.83 1.12 2.84 -- -3.78 -1.29 4.32 26.38 1274 -- --
654.96 1.19 7.71 -5.91 1.11 2.44 -- -- -1.12 4.29 26.2 1276 -- --
716.53 1.25 7.82 -6.65 -- 2.97 -- -2.84 -1.32 -- 25.85 1257 -- --
888.01 1.4 7.68 -5.09 1.43 -- 2.17 -- -0.985 3.79 -- -- -- --
901.72 1.41 7.69 -5.12 1.43 -- -- -- -0.997 3.59 -- -- -- --
718.81 1.25 7.74 -5.94 -- 2.68 -- -- -1.16 -- 25.83 1263 -- --
1498.88 1.8 7.48 -- 1.16 1.37 -- -- -0.111 3.92 30.5 1282 -- --
1016.31 1.49 7.69 -5.06 -- -- -- -- -0.959 -- -- -- -- --
1593.94 1.87 7.56 -- 1.33 -- -- -- -0.427 3.62 -- -- -- --
1571.16 1.85 7.49 -- -- 1.54 -- -- -0.0574 -- 30.4 1233 -- --
1692.95 1.92 7.56 -- -- -- -- -- -0.397 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 639.04 radiation 20 1440 > th dose independent rect. 16 15
2 644.74 radiation 20 1440 > th dose independent rect. 16 1
16 645.06 radiation 20 1440 < th dose independent rect. 16 15
17 645.62 humidity 70 14400 < th dose independent rect. 19 1
18 646.68 radiation 20 1440 < th dose independent rect. 16 1
19 646.77 radiation 20 1440 < th dose independent rect. 16 13
23 647.55 radiation 20 1440 < th dose independent rect. 16 4
27 648.33 radiation 20 1440 < th dose independent rect. 16 9
32 649.45 humidity 70 14400 > th dose independent rect. 19 1
33 649.84 humidity 70 14400 > th dose independent rect. 19 12
34 649.98 wind 5 43200 > th dose independent rect. 4 10
35 650.17 wind 5 43200 < th dose independent rect. 3 11
38 650.28 humidity 70 14400 < th dose independent rect. 19 12
40 650.65 temperature 25 720 > th dose dependent rect. 18 15
42 651.13 wind 5 43200 > th dose independent rect. 24 15
43 651.59 wind 5 43200 < th dose independent rect. 24 15
45 651.78 wind 5 43200 > th dose dependent rect. 19 19
48 652.00 wind 5 43200 > th dose independent rect. 19 19
50 652.17 humidity 70 14400 > th dose independent rect. 19 10
54 652.37 wind 5 43200 < th dose independent rect. 19 19
56 652.49 wind 5 43200 < th dose independent sin 5 NA
57 652.49 humidity 70 14400 > th dose independent rect. 19 6
59 652.58 wind 5 43200 > th dose independent sin 5 NA
61 652.73 humidity 70 14400 > th dose independent rect. 19 4
69 653.13 wind 5 43200 > th dose dependent rect. 24 14
80 653.72 wind 5 43200 > th dose dependent rect. 3 11
113 655.16 wind 5 43200 > th dose independent rect. 10 2
115 655.36 radiation 30 14400 < th dose independent rect. 15 17
121 655.77 wind 5 43200 < th dose independent rect. 10 2
133 656.27 radiation 20 14400 > th dose dependent rect. 16 15
144 656.82 wind 5 43200 > th dose dependent sin 6 NA
160 657.73 radiation 30 14400 < th dose independent rect. 15 14
163 657.85 radiation 30 14400 < th dose independent rect. 15 5
164 657.86 radiation 30 14400 < th dose independent rect. 15 10
166 657.88 radiation 30 14400 < th dose independent rect. 15 3
192 658.87 temperature 25 1440 > th dose dependent rect. 13 21
194 659.03 temperature 30 1440 < th dose independent rect. 15 23
195 659.07 temperature 25 1440 > th dose dependent rect. 11 22
196 659.09 temperature 30 1440 < th dose independent rect. 9 19
199 659.15 temperature 30 1440 < th dose independent rect. 9 10
200 659.15 temperature 30 1440 < th dose independent rect. 9 16
202 659.16 temperature 30 1440 < th dose independent rect. 9 22
205 659.19 temperature 30 1440 < th dose independent rect. 9 13
207 659.19 radiation 20 14400 > th dose dependent rect. 16 2
231 659.40 radiation 30 14400 > th dose independent rect. 16 16
235 659.42 temperature 25 1440 > th dose dependent rect. 6 18
252 659.64 temperature 30 1440 > th dose independent rect. 10 9
269 659.70 temperature 25 1440 > th dose dependent rect. 18 23
270 659.71 humidity 90 43200 > th dose dependent rect. 9 2
281 659.82 temperature 30 1440 > th dose independent rect. 15 23
345 660.28 radiation 30 14400 > th dose dependent rect. 15 17
349 660.35 temperature 25 1440 > th dose dependent no NA NA
351 660.36 temperature 25 1440 > th dose dependent rect. 11 13
359 660.43 wind 5 43200 > th dose independent rect. 5 2
376 660.67 temperature 30 1440 < th dose independent rect. 6 22
384 660.70 temperature 30 1440 < th dose independent rect. 24 19
388 660.71 radiation 40 14400 < th dose independent rect. 8 1
391 660.71 wind 5 43200 > th dose dependent rect. 9 4
398 660.73 temperature 30 1440 < th dose independent rect. 6 13
399 660.73 temperature 30 1440 < th dose independent rect. 6 19
402 660.73 temperature 30 1440 < th dose independent rect. 21 22
406 660.74 temperature 30 1440 > th dose independent sin 17 NA
412 660.75 temperature 30 1440 < th dose independent rect. 2 17
414 660.75 temperature 30 1440 < th dose independent rect. 2 23
424 660.77 temperature 30 1440 < th dose independent rect. 6 16
441 660.79 temperature 30 1440 < th dose independent no NA NA
451 660.80 temperature 30 1440 < th dose independent rect. 2 20
512 660.95 temperature 30 1440 < th dose independent rect. 13 23
516 660.98 temperature 30 1440 < th dose independent sin 19 NA
526 661.07 temperature 25 1440 > th dose dependent sin 19 NA
558 661.20 radiation 10 1440 < th dose dependent rect. 18 10
573 661.29 radiation 1 14400 > th dose dependent rect. 17 12
579 661.32 temperature 30 1440 < th dose independent rect. 16 13
584 661.34 temperature 25 1440 > th dose dependent rect. 13 11
589 661.37 radiation 30 14400 > th dose independent rect. 7 1
611 661.42 temperature 30 1440 > th dose independent rect. 16 3
631 661.46 temperature 25 14400 > th dose dependent rect. 22 1
639 661.53 temperature 30 1440 < th dose independent rect. 16 4
646 661.57 temperature 30 1440 > th dose independent no NA NA
738 661.58 temperature 30 1440 < th dose independent rect. 16 9
740 661.58 temperature 30 1440 > th dose independent rect. 13 23
759 661.68 wind 5 43200 < th dose independent rect. 5 2
766 661.74 radiation 1 14400 > th dose dependent rect. 17 2
839 662.36 temperature 30 1440 < th dose independent rect. 10 4
907 662.77 radiation 1 14400 > th dose dependent rect. 16 14
909 662.80 radiation 20 1440 > th dose dependent rect. 16 15
920 662.88 temperature 25 1440 > th dose dependent rect. 6 11
935 663.03 temperature 25 14400 > th dose independent rect. 23 1
941 663.09 temperature 30 1440 > th dose independent rect. 10 4