Os11g0170200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF869, plant family protein.
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Os11g0170200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF869, plant family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 34.58 | 0.276 | 9.74 | 0.324 | 1.1 | 0.797 | 0.181 | 2.64 | 0.153 | 20.8 | 18.45 | 5424 | -- | -- |
| 36.8 | 0.283 | 9.83 | -0.198 | 1.05 | 0.714 | 0.252 | -- | 0.084 | 20.7 | 25.37 | 2606 | -- | -- |
| 34.68 | 0.274 | 9.74 | 0.317 | 1.1 | 0.812 | -- | 2.67 | 0.154 | 20.8 | 18.22 | 5400 | -- | -- |
| 36.89 | 0.283 | 9.83 | -0.234 | 1.05 | 0.74 | -- | -- | 0.0731 | 20.8 | 25.56 | 2465 | -- | -- |
| 76.28 | 0.407 | 9.72 | 0.197 | -- | 1.11 | -- | 3.07 | 0.135 | -- | 24.13 | 762 | -- | -- |
| 56.01 | 0.351 | 9.82 | -0.00466 | 1.13 | -- | 0.302 | -- | 0.13 | 21.1 | -- | -- | -- | -- |
| 56.33 | 0.351 | 9.82 | -0.0148 | 1.13 | -- | -- | -- | 0.13 | 21 | -- | -- | -- | -- |
| 70.63 | 0.391 | 9.82 | -0.328 | -- | 1.45 | -- | -- | -0.0163 | -- | 24.29 | 774 | -- | -- |
| 38.42 | 0.289 | 9.82 | -- | 1.05 | 0.697 | -- | -- | 0.1 | 20.7 | 25.5 | 2465 | -- | -- |
| 129.83 | 0.532 | 9.78 | -0.0128 | -- | -- | -- | -- | 0.124 | -- | -- | -- | -- | -- |
| 56.33 | 0.351 | 9.81 | -- | 1.13 | -- | -- | -- | 0.132 | 21 | -- | -- | -- | -- |
| 73.6 | 0.4 | 9.81 | -- | -- | 1.38 | -- | -- | 0.0114 | -- | 24.13 | 760 | -- | -- |
| 129.84 | 0.532 | 9.78 | -- | -- | -- | -- | -- | 0.125 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 35.11 | temperature | 15 | 4320 | > th | dose dependent | rect. | 5 | 19 |
| 8 | 35.15 | temperature | 25 | 14400 | > th | dose independent | rect. | 22 | 1 |
| 46 | 35.24 | temperature | 15 | 4320 | > th | dose dependent | sin | 19 | NA |
| 105 | 35.28 | temperature | 20 | 4320 | > th | dose dependent | rect. | 15 | 23 |
| 107 | 35.29 | temperature | 20 | 4320 | > th | dose dependent | no | NA | NA |
| 114 | 35.29 | temperature | 20 | 4320 | > th | dose dependent | rect. | 18 | 21 |
| 126 | 35.29 | temperature | 20 | 4320 | > th | dose dependent | rect. | 20 | 23 |
| 154 | 35.30 | temperature | 20 | 4320 | > th | dose dependent | rect. | 12 | 23 |
| 180 | 35.32 | temperature | 20 | 4320 | > th | dose dependent | rect. | 21 | 17 |
| 205 | 35.33 | temperature | 20 | 4320 | > th | dose dependent | sin | 5 | NA |
| 220 | 35.34 | temperature | 25 | 14400 | < th | dose independent | rect. | 20 | 4 |
| 253 | 35.36 | temperature | 15 | 4320 | > th | dose dependent | rect. | 15 | 6 |
| 272 | 35.37 | temperature | 25 | 4320 | < th | dose independent | rect. | 7 | 2 |
| 276 | 35.37 | temperature | 20 | 4320 | > th | dose dependent | rect. | 7 | 1 |
| 316 | 35.39 | temperature | 20 | 4320 | > th | dose dependent | rect. | 1 | 12 |
| 334 | 35.40 | temperature | 20 | 4320 | > th | dose dependent | rect. | 3 | 8 |
| 349 | 35.41 | temperature | 15 | 4320 | > th | dose dependent | rect. | 5 | 6 |
| 375 | 35.42 | temperature | 25 | 14400 | < th | dose independent | rect. | 22 | 1 |
| 394 | 35.43 | temperature | 25 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 397 | 35.43 | temperature | 15 | 4320 | > th | dose dependent | sin | 2 | NA |
| 398 | 35.43 | temperature | 30 | 4320 | < th | dose dependent | rect. | 7 | 1 |
| 413 | 35.44 | temperature | 30 | 4320 | < th | dose dependent | rect. | 6 | 3 |
| 414 | 35.44 | temperature | 20 | 4320 | > th | dose dependent | rect. | 5 | 4 |
| 456 | 35.46 | temperature | 25 | 14400 | > th | dose independent | rect. | 20 | 4 |
| 462 | 35.46 | temperature | 15 | 4320 | > th | dose dependent | rect. | 18 | 1 |
| 503 | 35.48 | temperature | 25 | 4320 | > th | dose independent | rect. | 7 | 2 |
| 583 | 35.52 | temperature | 30 | 4320 | < th | dose dependent | rect. | 5 | 6 |
| 684 | 35.57 | temperature | 30 | 4320 | < th | dose dependent | rect. | 5 | 19 |
| 876 | 35.69 | temperature | 30 | 4320 | < th | dose dependent | rect. | 18 | 2 |