BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os11g0170200 Os11g0170200|AK073389
(901 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G77580.2 | chr1:29144191-29146793 REVERSE LENGTH=780 218 2e-56
AT3G05270.1 | chr3:1500803-1502926 REVERSE LENGTH=616 206 4e-53
AT1G21810.1 | chr1:7656578-7658634 REVERSE LENGTH=629 197 2e-50
AT1G19835.1 | chr1:6856212-6859513 REVERSE LENGTH=983 131 2e-30
AT4G36120.1 | chr4:17093213-17096573 REVERSE LENGTH=997 127 3e-29
AT1G47900.1 | chr1:17647340-17651035 REVERSE LENGTH=1055 118 2e-26
AT2G23360.1 | chr2:9949420-9952727 FORWARD LENGTH=899 85 2e-16
>AT1G77580.2 | chr1:29144191-29146793 REVERSE LENGTH=780
Length = 779
Score = 218 bits (554), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 140/346 (40%), Positives = 196/346 (56%), Gaps = 37/346 (10%)
Query: 66 QSPQPDVFTNVKDEDMQDXXXXXXXXXXXXXXTINAKDDLVKQHTKVAEEAVAGWEQAEA 125
QSP + + E+++D ++AKDDLVKQH KVAEEAVAGWE+AE
Sbjct: 43 QSPTVSLEVETEKEELKDSMKTLAEKLSAALANVSAKDDLVKQHVKVAEEAVAGWEKAEN 102
Query: 126 EVSTLKRLLEASTQKNASLDDQVNHLDDALKECVXXXXXXXXXXXXKIRDAVAKKTQELD 185
EV LK LEA+ KN L+D+V+HLD ALKECV +I+DAV ++TQEL
Sbjct: 103 EVVELKEKLEAADDKNRVLEDRVSHLDGALKECVRQLRQARDEQEQRIQDAVIERTQELQ 162
Query: 186 SHKSELQNHIYELKQQLEAAKLEAATVAVQHDLQDKLQAAEKENKGLKIELLTLAKDLKR 245
S ++ L+N I+E T +L ++ KEN L+ ELL ++L+
Sbjct: 163 SSRTSLENQIFE-------------TATKSEELSQMAESVAKENVMLRHELLARCEELEI 209
Query: 246 LSLERDLSNEAAETASKQHLESVKKIARVEAECRKLRHLTRRTSLANDSRPAPNNACMES 305
++ERDLS +AAETASKQ L+S+KK+A++EAECRK R L + ++ ND R
Sbjct: 210 RTIERDLSTQAAETASKQQLDSIKKVAKLEAECRKFRMLAKSSASFNDHRS--------- 260
Query: 306 LTDSQSDSGERMLTVDSEMRNSDSWASALIAELDQFKNSSASSRDVVNNHVEIDLMDDFL 365
TDS SD GERM ++ SDSWAS+ + E + +S+S +E+DLM DFL
Sbjct: 261 -TDSHSDGGERM-----DVSCSDSWASSTLIEKRSLQGTSSS--------IELDLMGDFL 306
Query: 366 EMEKLAALSEVERVSSSFGTETDSDQAVAIDKAS-KVETETLKSQV 410
EME+L AL E + G E+ +++ V + S E E L S++
Sbjct: 307 EMERLVALPETPDGNGKSGPESVTEEVVVPSENSLASEIEVLTSRI 352
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 98/198 (49%), Gaps = 35/198 (17%)
Query: 655 ELKMQLEAVEGIRKMLESELESSHQETMKLQEKISLLEVRLKDQTALLVEFTA---KAED 711
ELK +++ + L ELE+ E M+L+ K+ LEV ++ L + F K E+
Sbjct: 504 ELKSEVKCNREVESTLRFELEAIACEKMELENKLEKLEV---EKAELQISFDIIKDKYEE 560
Query: 712 AAVGRKAMEGQLEGAKLEITKLTN----------------------RVSLLQGKIEQEKL 749
+ V + +E +L + E+ KL N ++ L+ + +E+
Sbjct: 561 SQVCLQEIETKLGEIQTEM-KLVNELKAEVESQTIAMEADAKTKSAKIESLEEDMRKERF 619
Query: 750 LSEEYEAKCRKLEAQLSRDSREARLWRLANTNGDLKVKQDKELSSAAGKLVECQKTIANL 809
+E KC LE ++S + + + N + K+KQ+ ++ +AAGKL CQKTIA+L
Sbjct: 620 AFDELRRKCEALEEEISLHKENS----IKSENKEPKIKQE-DIETAAGKLANCQKTIASL 674
Query: 810 GRQLKSLTDL-DSVTAEP 826
G+QL+SL L D +T P
Sbjct: 675 GKQLQSLATLEDFLTDTP 692
>AT3G05270.1 | chr3:1500803-1502926 REVERSE LENGTH=616
Length = 615
Score = 206 bits (524), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 188/560 (33%), Positives = 291/560 (51%), Gaps = 87/560 (15%)
Query: 37 ETQGTATAKSLNEKLVLETVSDDSSTQHCQSPQPDVFTNVKDEDMQDXXXXXXXXXXXXX 96
ET+ T + S +E+ SDD Q QSP+ + ++E+
Sbjct: 19 ETESTGSVSSHSERF-----SDD---QRSQSPELNSKPVTREEEATADIKILTERLSAAL 70
Query: 97 XTINAKDDLVKQHTKVAEEAVAGWEQAEAEVSTLKRLLEASTQKNASLDDQVNHLDDALK 156
++ K+DL KQH KVAEEAV+GWE+AE E + LK+ L+AST K ++L+D+ +HLD ALK
Sbjct: 71 LNVSLKEDLAKQHAKVAEEAVSGWEKAENEAAALKQQLDASTSKVSALEDRNSHLDSALK 130
Query: 157 ECVXXXXXXXXXXXXKIRDAVAKKTQELDSHKSELQNHIYELKQQLEAAKLEAATVAVQH 216
ECV KI +A+ K +E ++ KS+L+ I EL+ A+ + T +V
Sbjct: 131 ECVRQLWQGREEQNQKIEEAINNKCKEWETTKSQLEARIEELQ-----ARQDVTTSSVHE 185
Query: 217 DLQDKLQAAEKENKGLKIELLTLAKDLKRLSLERDLSNEAAETASKQHLESVKKIARVEA 276
DL KL+A EKEN LK++LL+ ++++K ++ERDLS +AAE+ASKQ LE +KK+ ++EA
Sbjct: 186 DLYPKLEALEKENSALKLQLLSKSEEVKIRTIERDLSTQAAESASKQQLEGIKKLTKLEA 245
Query: 277 ECRKLRHLTRRTSLANDSRPAPNNACMESLTDSQSDSGERMLTVDSEMRNSDSWASALIA 336
ECRKLR + RR+ N++ ++S D+QSD R+ D+EM+ S + +I
Sbjct: 246 ECRKLRVMVRRSD---------NSSDLKSSIDNQSDYSGRVSFSDNEMQ---SPSEKIIG 293
Query: 337 ELDQFKNSSASSRDVVNNHVEIDLMDDFLEMEKLAAL--SEVERVSSSFGTETDSDQA-- 392
K+S A+S V+I LMDDFLEMEKLAAL SE R S E + A
Sbjct: 294 -----KSSMATS-------VDIGLMDDFLEMEKLAALPHSEPGRKHSESNKELEKSNAHV 341
Query: 393 --------------------------------VAIDKASKVETETLKSQVTDLQAK---V 417
+A++ SK + E L+S++ +++ K +
Sbjct: 342 NQLKHELKTSLRRISELEEKVEMVEVEKLQLEMALN-GSKEQIEALQSRLKEIEGKLSEM 400
Query: 418 EKLETEKRDLEMALAEARVQLDASCDALMAANNKLAELQMQFNLANESKIAALGQADQLD 477
+KLE E ++LE+ L E+ Q++ L A L+EL+ + E + G QL+
Sbjct: 401 KKLEAENQELELLLGESGKQMEDLQRQLNKAQVNLSELETRRAEKLELTMCLNGTKKQLE 460
Query: 478 AERGSLALQLESKSIEVEKL--------QAVVASLEESTDKKE-LESQLESTSVELADLC 528
+ L + E K E++ L +A L+ + K E +ES+L+ E L
Sbjct: 461 TSQNRLK-ETERKLTELQTLLHLTKDAKEAAEDGLKAANGKTEAIESRLKDVEAEAESLI 519
Query: 529 KTVASLQEQIDAERTLSLQH 548
+ SL++ + ER LS +H
Sbjct: 520 LKIKSLEDVTEKERALSAKH 539
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 79/138 (57%), Gaps = 10/138 (7%)
Query: 698 QTALLVEFTAK--AED---AAVGR-KAMEGQLEGAKLEITKLTNRVSLLQGKIEQEKLLS 751
QT L + AK AED AA G+ +A+E +L+ + E L ++ L+ E+E+ LS
Sbjct: 477 QTLLHLTKDAKEAAEDGLKAANGKTEAIESRLKDVEAEAESLILKIKSLEDVTEKERALS 536
Query: 752 EEYEAKCRKLEAQLSRDSREARLWR----LANTNGDLKVKQDKELSSAAGKLVECQKTIA 807
++ +KC +L+ ++S+ +E + N ++KQ+KEL+ AA K ECQ+TIA
Sbjct: 537 AKHNSKCNELQDEISKLKQELEHHQETEPAPNHIKGFELKQEKELAVAASKFAECQRTIA 596
Query: 808 NLGRQLKSLTDLDSVTAE 825
+LG++L+SL + E
Sbjct: 597 SLGQRLQSLATFEDFLIE 614
>AT1G21810.1 | chr1:7656578-7658634 REVERSE LENGTH=629
Length = 628
Score = 197 bits (502), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 187/560 (33%), Positives = 279/560 (49%), Gaps = 133/560 (23%)
Query: 98 TINAKDDLVKQHTKVAEEAVAGWEQAEAEVSTLKRLLEASTQKNASLDDQVNHLDDALKE 157
+++KD+LVKQH KVAE+AVAGWE+AE EV LK+ LE + KN L+D+V+HLD ALKE
Sbjct: 11 VMDSKDELVKQHAKVAEDAVAGWEKAENEVVELKQKLEDAADKNIVLEDRVSHLDGALKE 70
Query: 158 CVXXXXXXXXXXXXKIRDAVAKKTQELDSHKSELQNHIYELKQQLEAAKLEAATVAVQHD 217
CV I+ AV + T+EL S + L+ + EL+++ EAAK
Sbjct: 71 CVRQLRQFRDEQEKNIQAAVTESTKELHSANTGLEKRVLELQKEAEAAK----------- 119
Query: 218 LQDKLQAAEKENKGLKIELLTLAKDLKRLSLERDLSNEAAETASKQHLESVKKIARVEAE 277
EN L+ E LT +DL+ + +ERDLS +AAETASKQHL+ +KK+A++EAE
Sbjct: 120 ---------SENMMLRREFLTQREDLEIVMIERDLSTQAAETASKQHLDIIKKLAKLEAE 170
Query: 278 CRKLRHLTRRTSLANDSRPAPNNACMESLTDSQSDSG-ERMLTVDSEMRNSDSWA-SALI 335
CRKLR L + +S + ++ DS SD G ER+ E SDSWA SA I
Sbjct: 171 CRKLRILAKTSSSLSSNQS----------VDSHSDGGRERV-----EGSCSDSWASSAFI 215
Query: 336 AELDQFKNSSASSRDV--VNNHVEIDLMDDFLEMEKLAAL-SEVERVSSSFGTETDSDQA 392
+ELDQ KN +R + + EIDLMDDFLEME+L AL +E + +S G E
Sbjct: 216 SELDQIKNEKGGNRSLQGTTSSTEIDLMDDFLEMERLVALPTETQAKNSKDGYE------ 269
Query: 393 VAIDKASKVETETLKSQVTDLQAKVEKLETEKRDLEMAL-----AEARVQLDASC----- 442
L K+EK++ EK DLE + AE R+ L+
Sbjct: 270 ------------------LSLMEKLEKIQAEKDDLEREVKCCREAEKRLSLEIEAVVGDK 311
Query: 443 ----DALMAANNKLAELQMQFNL----ANESKIAALGQADQLDAERGSLALQLESKSIEV 494
D L + AEL+ F++ ES++ + ++
Sbjct: 312 MELEDMLKRVEAEKAELKTSFDVLKDKYQESRVC------------------FQEVDTKL 353
Query: 495 EKLQAVVASLEESTDKKELESQLESTSVELADLCKTVASLQEQIDAERTLSLQHXXXXXX 554
EKLQA +K EL+S++ CK +AE+ SL+
Sbjct: 354 EKLQA---------EKDELDSEV--------ICCK---------EAEKRFSLE----LEA 383
Query: 555 XXXXXXSLEAQLQSAHADIGKLRGSIETLESELQKEKTMYEELVVQMESMKIESEKKLGV 614
+E +L+ A+ +L+ S + ++ + Q+ + ++E+ +++E+MK E KL
Sbjct: 384 VVGDKIEMEDELEKMEAEKAELKISFDVIKDQYQESRVCFQEVEMKLEAMK--RELKLAN 441
Query: 615 ESAKEALEARLLVVNSEIAK 634
ES +A E+R+ + +E+ K
Sbjct: 442 ESKTQA-ESRVTRMEAEVRK 460
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 123/478 (25%), Positives = 218/478 (45%), Gaps = 79/478 (16%)
Query: 365 LEMEKLAALSEVERVSSSFGTETDSDQAVAIDK-ASKVETETLKSQVTDLQAKVEKLETE 423
L+ E AA SE + F T+ + + V I++ S ET Q D+ K+ KLE E
Sbjct: 111 LQKEAEAAKSENMMLRREFLTQREDLEIVMIERDLSTQAAETASKQHLDIIKKLAKLEAE 170
Query: 424 KRDLEMALAE-----------------ARVQLDASCDALMAANNKLAELQMQFNLANESK 466
R L + LA+ R +++ SC A++ ++EL + NE
Sbjct: 171 CRKLRI-LAKTSSSLSSNQSVDSHSDGGRERVEGSCSDSWASSAFISELD---QIKNEK- 225
Query: 467 IAALGQADQLDAERGSLALQLESKSIEVEKLQAVVASLE--ESTDKKELE--SQLESTSV 522
G L S + L +E+E+L A+ + S D EL +LE
Sbjct: 226 ----GGNRSLQGTTSSTEIDLMDDFLEMERLVALPTETQAKNSKDGYELSLMEKLEKIQA 281
Query: 523 ELADLCKTVASLQEQIDAERTLSLQHXXXXXXXXXXXXSLEAQLQSAHADIGKLRGSIET 582
E DL + V +E AE+ LSL+ LE L+ A+ +L+ S +
Sbjct: 282 EKDDLEREVKCCRE---AEKRLSLE----IEAVVGDKMELEDMLKRVEAEKAELKTSFDV 334
Query: 583 LESELQKEKTMYEELVVQMESMKIESEKKLGVESAKEALEARLLVVNSEIAKLHGTVNDL 642
L+ + Q+ + ++E+ ++E ++ E ++ ++SE+
Sbjct: 335 LKDKYQESRVCFQEVDTKLEKLQAEKDE-----------------LDSEVI--------- 368
Query: 643 ECDAAKEKAFSSELKMQLEAVEGIRKMLESELESSHQETMKLQEKISLLEVRLKDQTALL 702
C EK FS ++LEAV G + +E ELE E +L+ +++ + ++
Sbjct: 369 -CCKEAEKRFS----LELEAVVGDKIEMEDELEKMEAEKAELKISFDVIKDQYQESRVCF 423
Query: 703 VEFTAKAEDAAVGRKAMEGQLEGAKLEITKLTNRVSLLQGKIEQEKLLSEEYEAKCRKLE 762
E K E AM+ +L+ A T+ +RV+ ++ ++ +E+++S+ + KC E
Sbjct: 424 QEVEMKLE-------AMKRELKLANESKTQAESRVTRMEAEVRKERIVSDGLKEKCETFE 476
Query: 763 AQLSRDSREARLWRLANTNGDLKVKQDKELSSAAGKLVECQKTIANLGRQLKSLTDLD 820
+L R+ E + + + K+KQ+ ++++AAGK +CQKTIA+LG+QL+SL L+
Sbjct: 477 EELRREIEEKTMIKREKV--EPKIKQE-DIATAAGKFADCQKTIASLGKQLQSLATLE 531
>AT1G19835.1 | chr1:6856212-6859513 REVERSE LENGTH=983
Length = 982
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 80/212 (37%), Positives = 124/212 (58%), Gaps = 24/212 (11%)
Query: 99 INAKDDLVKQHTKVAEEAVAGWEQAEAEVSTLKRLLEASTQKNASLDDQVNHLDDALKEC 158
I AK+ LVKQH+KVAEEAV GWE+AEAE S LK LE T +++D+ HLD ALKEC
Sbjct: 79 IVAKEVLVKQHSKVAEEAVTGWEKAEAEASALKTHLETITLAKLTVEDRAAHLDGALKEC 138
Query: 159 VXXXXXXXXXXXXKIRDAVAKKTQELDSHKSELQNHIYELKQQLEAAKLEAATVA----- 213
+ K+ D +A KT ++D+ ++E ++ I E +++L E ++
Sbjct: 139 MRQIRSLKEENEQKLHDVIATKTNQMDNLRAEFESRIGEYEEELLRCGAENDALSRSLQE 198
Query: 214 ------------------VQHDLQDKLQAAEKENKGLKIELLTLAKDLKRLSLERDLSNE 255
++H L++ +++ E+E LK E + K+L+ + E+++S
Sbjct: 199 RSNMLMRISEEKSQAESEIEH-LKNNIESCEREINTLKYETHVITKELEIRNEEKNMSMR 257
Query: 256 AAETASKQHLESVKKIARVEAECRKLRHLTRR 287
+AE A+KQHLE VKKIA++EAEC++LR L R+
Sbjct: 258 SAEAANKQHLEGVKKIAKLEAECQRLRTLVRK 289
>AT4G36120.1 | chr4:17093213-17096573 REVERSE LENGTH=997
Length = 996
Score = 127 bits (319), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 84/213 (39%), Positives = 122/213 (57%), Gaps = 26/213 (12%)
Query: 99 INAKDDLVKQHTKVAEEAVAGWEQAEAEVSTLKRLLEASTQKNASLDDQVNHLDDALKEC 158
IN K+ L+ QH KVAEEAV+GWE+A+AE LKR LE+ T + +D+ +HLDDALKEC
Sbjct: 89 INTKESLILQHAKVAEEAVSGWEKADAETLALKRQLESVTLLKLTAEDRASHLDDALKEC 148
Query: 159 VXXXXXXXXXXXXKIRDAVAKKTQELDSHKSELQNHIYELKQQLEAAKLEAATVAVQHDL 218
K++D + KT + D K+EL+ I EL + L A + A A+ L
Sbjct: 149 TRQIRIVKEESDKKLQDVILAKTSQWDKIKAELEGKIDELSEGLHRAASDNA--ALTRSL 206
Query: 219 QDK------------------------LQAAEKENKGLKIELLTLAKDLKRLSLERDLSN 254
Q++ LQ AEKE LK +L +K+++ + E+++S
Sbjct: 207 QERSEMIVRISEERSKAEADVEKLKTNLQLAEKEISYLKYDLHVASKEVEIRNEEKNMSL 266
Query: 255 EAAETASKQHLESVKKIARVEAECRKLRHLTRR 287
++A+ A+KQHLE VKKIA++EAEC +LR L R+
Sbjct: 267 KSADIANKQHLEGVKKIAKLEAECHRLRGLLRK 299
>AT1G47900.1 | chr1:17647340-17651035 REVERSE LENGTH=1055
Length = 1054
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/211 (36%), Positives = 120/211 (56%), Gaps = 22/211 (10%)
Query: 99 INAKDDLVKQHTKVAEEAVAGWEQAEAEVSTLKRLLEASTQKNASLDDQVNHLDDALKEC 158
I K+ LVKQH+KVAE+AV+GWE+A+AE LK LE+ T + +D+ HLD ALKEC
Sbjct: 129 IVTKEALVKQHSKVAEDAVSGWEKADAEALALKNTLESVTLSKLTAEDRAAHLDGALKEC 188
Query: 159 VXXXXXXXXXXXXKIRDAVAKKTQELDSHKSELQNHIYELKQQL--EAAKLEAATVAVQ- 215
+ K+ D KT++++ E + + + +Q+L AA +A + +Q
Sbjct: 189 MRQIRNLKKDHEVKLHDVALSKTKQIEKMTMEFEKRMCDYEQELLRSAADSDALSRTLQE 248
Query: 216 -------------------HDLQDKLQAAEKENKGLKIELLTLAKDLKRLSLERDLSNEA 256
L+ L+ E+E K LK E+ ++K+L+ + E+++ +
Sbjct: 249 RSNMLVKVSEEKSRADAEIETLKSNLEMCEREIKSLKYEVHVVSKELEIRNEEKNMCIRS 308
Query: 257 AETASKQHLESVKKIARVEAECRKLRHLTRR 287
AE+A+KQHLE VKKIA++EAEC++LR L R+
Sbjct: 309 AESANKQHLEGVKKIAKLEAECQRLRSLVRK 339
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 100/213 (46%), Gaps = 37/213 (17%)
Query: 636 HGTVND---LECDAAKEKAFSSELKMQLEAVEGIRKMLESELESSHQETMKLQEKISLLE 692
+G V++ + CD + + S+ K+Q E+E E K+ I L+
Sbjct: 768 NGCVHNEPGVPCDENRVSGYESDSKLQ-------------EIEELRSEKEKMAVDIEGLK 814
Query: 693 VRLKDQTALLVEFTAKAEDAAVGRKAMEGQLE------------GAKLEI--TKLTNRVS 738
+L++ LL + ++ + A + + QL A LEI +L ++
Sbjct: 815 CQLQESEQLLADIRSQFDSAQRSNRLADTQLRCMTESYRSLESRAADLEIDVNQLKEKIQ 874
Query: 739 LLQGKIEQEKLLSEEYEAKCRKLEAQLSRDSREARLWRLANTNGDLKVKQDKELSSAAGK 798
L+ ++E EK +E +C +LE + R R L + D+K KQ++ELS+AA K
Sbjct: 875 KLENELEDEKCNHQEAILRCHELEEHIQR-HRNTSLVAEDDEEADIKSKQERELSAAAEK 933
Query: 799 LVECQKTIANLGRQLKSLTDLDSVTAEPEKLES 831
L ECQ+TI LG+QLKS +PE++ S
Sbjct: 934 LAECQETIFVLGKQLKSF------RPQPEQMRS 960
>AT2G23360.1 | chr2:9949420-9952727 FORWARD LENGTH=899
Length = 898
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 109/202 (53%), Gaps = 22/202 (10%)
Query: 108 QHTKVAEEAVAGWEQAEAEVSTLKRLLEASTQKNASLDDQVNHLDDALKECVXXXXXXXX 167
+H A+EA+ GWE+ +AEV++LK+ L+ + + +++ +H D LKECV
Sbjct: 51 KHETEAQEAIVGWEKTKAEVASLKKKLDEALNEKHRSEERSSHTDAGLKECVQQLRFVRE 110
Query: 168 XXXXKIRDAVAKKTQELDSH----KSELQNHIYELKQ-QLEAAKLEAATVAVQHDLQD-- 220
++ DA+ K +QE + K+EL L + + E A+L A +A ++D
Sbjct: 111 EQERRMHDALTKASQEYERRLIVIKTELAGSGKRLAEAEGENAQLSKALLAKNKTVEDLN 170
Query: 221 ---------------KLQAAEKENKGLKIELLTLAKDLKRLSLERDLSNEAAETASKQHL 265
L++ EKEN L+ E+ L K+L+ + ER+ S AE + K HL
Sbjct: 171 RERDRIEVDFNSLVSSLESKEKENVSLRYEVRVLEKELELRNEEREFSRRTAEASHKLHL 230
Query: 266 ESVKKIARVEAECRKLRHLTRR 287
E+VKK+A++E+EC++LR L R+
Sbjct: 231 ENVKKVAKLESECQRLRVLVRK 252
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.307 0.122 0.316
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 15,190,660
Number of extensions: 566483
Number of successful extensions: 4017
Number of sequences better than 1.0e-05: 71
Number of HSP's gapped: 3611
Number of HSP's successfully gapped: 136
Length of query: 901
Length of database: 11,106,569
Length adjustment: 108
Effective length of query: 793
Effective length of database: 8,145,641
Effective search space: 6459493313
Effective search space used: 6459493313
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 116 (49.3 bits)