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Os12g0169100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Protein of unknown function DUF869, plant family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.5 (0.0224) R2 : 0.199
β1 : -0.853 (0.0821) R2dD : 0.197 R2D : 0.157
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.202 (0.0479) R2dN8 : 0.0419 R2N8 : 0.00203
σ : 0.421
deviance : 81.05
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
69.07 0.39 7.5 -0.974 0.41 0.408 0.0406 1.15 -0.183 22.7 75 616 -- --
71.39 0.394 7.5 -0.894 0.466 0.491 -0.251 -- -0.162 22.6 74.04 675 -- --
69.05 0.387 7.5 -0.973 0.402 0.405 -- 1.15 -0.184 22.6 74.98 592 -- --
71.68 0.394 7.5 -0.874 0.448 0.459 -- -- -0.165 23 74.03 688 -- --
76.16 0.406 7.48 -0.867 -- 0.545 -- 0.0252 -0.112 -- 68 1613 -- --
74.86 0.406 7.51 -0.865 0.316 -- 0.0218 -- -0.208 1.12 -- -- -- --
74.86 0.405 7.51 -0.865 0.316 -- -- -- -0.208 1.08 -- -- -- --
76.03 0.406 7.49 -0.865 -- 0.533 -- -- -0.14 -- 66 1621 -- --
90.3 0.443 7.47 -- 0.478 0.618 -- -- -0.00631 0.523 64.16 1159 -- --
81.05 0.421 7.5 -0.853 -- -- -- -- -0.202 -- -- -- -- --
94.6 0.455 7.48 -- 0.302 -- -- -- -0.112 0.968 -- -- -- --
95.16 0.454 7.48 -- -- 0.45 -- -- -0.0918 -- 19 1593 -- --
100.27 0.467 7.48 -- -- -- -- -- -0.107 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 66.44 wind 5.0 10 < th dose independent rect. 6 11
2 66.51 wind 7.0 10 < th dose dependent rect. 6 11
6 66.76 temperature 20.0 270 > th dose independent rect. 17 7
7 66.80 wind 7.0 10 < th dose dependent rect. 6 8
8 66.81 radiation 10.0 14400 < th dose dependent rect. 22 5
11 66.93 wind 5.0 10 < th dose independent rect. 6 8
12 66.94 atmosphere 1015.0 270 < th dose dependent rect. 17 6
13 67.05 wind 1.0 270 > th dose independent rect. 4 18
16 67.17 temperature 10.0 270 > th dose dependent rect. 17 7
25 67.31 atmosphere 1005.0 14400 < th dose independent rect. 13 1
27 67.32 atmosphere 1005.0 14400 > th dose independent rect. 16 1
28 67.34 atmosphere 1005.0 14400 > th dose independent rect. 13 1
29 67.34 wind 3.0 43200 < th dose dependent rect. 1 4
31 67.36 temperature 25.0 14400 > th dose dependent rect. 2 1
34 67.38 wind 3.0 43200 < th dose dependent rect. 3 2
37 67.40 atmosphere 1005.0 14400 < th dose independent rect. 12 6
38 67.41 atmosphere 1005.0 14400 < th dose independent rect. 16 1
45 67.45 atmosphere 1005.0 14400 > th dose independent rect. 12 6
50 67.47 wind 1.0 30 > th dose dependent rect. 10 11
55 67.51 radiation 10.0 14400 < th dose dependent rect. 19 8
57 67.52 temperature 20.0 270 > th dose independent rect. 18 15
77 67.62 wind 1.0 90 > th dose independent rect. 17 16
100 67.71 atmosphere 1015.0 10 < th dose dependent rect. 18 6
117 67.77 radiation 1.0 720 < th dose dependent rect. 21 10
126 67.80 atmosphere 1015.0 270 < th dose independent rect. 18 15
145 67.87 radiation 40.0 270 < th dose independent rect. 12 12
150 67.89 radiation 1.0 720 < th dose independent rect. 21 10
154 67.90 wind 1.0 270 > th dose independent rect. 9 9
171 67.97 atmosphere 1015.0 270 < th dose independent rect. 15 9
175 67.98 temperature 20.0 10 > th dose independent rect. 6 18
186 68.01 humidity 50.0 720 > th dose dependent rect. 19 14
187 68.02 wind 9.0 43200 > th dose dependent rect. 18 1
200 68.06 temperature 25.0 14400 > th dose independent rect. 3 1
204 68.06 wind 7.0 10 < th dose dependent rect. 6 6
206 68.07 wind 5.0 10 < th dose independent rect. 6 18
210 68.08 humidity 80.0 720 > th dose independent rect. 21 1
211 68.08 atmosphere 1015.0 270 < th dose independent rect. 17 7
214 68.08 atmosphere 1015.0 10 < th dose independent rect. 6 18
221 68.09 radiation 40.0 270 < th dose dependent rect. 12 11
226 68.11 precipitation 0.1 43200 > th dose dependent rect. 13 1
233 68.12 temperature 20.0 270 > th dose independent rect. 5 18
235 68.13 wind 9.0 43200 > th dose independent rect. 18 1
242 68.15 wind 5.0 10 < th dose independent rect. 6 6
246 68.16 temperature 10.0 270 > th dose independent rect. 9 9
247 68.16 atmosphere 1015.0 270 < th dose independent rect. 9 9
249 68.16 temperature 10.0 270 > th dose independent rect. 18 15
250 68.16 humidity 50.0 270 > th dose independent rect. 18 15
255 68.18 radiation 10.0 4320 > th dose independent rect. 17 1
270 68.19 humidity 50.0 270 > th dose independent rect. 23 18
273 68.20 wind 9.0 270 < th dose independent rect. 18 15
277 68.21 wind 1.0 43200 > th dose dependent rect. 3 1
282 68.21 radiation 1.0 720 < th dose dependent rect. 21 14
302 68.24 radiation 1.0 720 < th dose dependent rect. 5 2
310 68.25 wind 9.0 10 < th dose dependent rect. 6 18
312 68.26 wind 9.0 270 < th dose independent rect. 9 9
322 68.27 humidity 50.0 270 > th dose independent rect. 9 9
323 68.27 temperature 20.0 90 > th dose independent rect. 20 15
324 68.27 atmosphere 995.0 270 > th dose independent rect. 18 15
325 68.27 radiation 40.0 270 < th dose independent rect. 18 15
328 68.28 wind 1.0 270 > th dose independent rect. 22 6
337 68.29 wind 5.0 10 < th dose independent rect. 6 20
340 68.30 wind 5.0 270 < th dose independent rect. 22 6
350 68.32 humidity 80.0 43200 > th dose independent rect. 13 1
362 68.33 radiation 1.0 720 < th dose dependent rect. 21 20
367 68.34 precipitation 0.1 270 < th dose independent rect. 24 15
370 68.34 precipitation 0.1 270 < th dose dependent rect. 24 15
381 68.36 precipitation 0.1 43200 > th dose dependent rect. 19 1
387 68.38 atmosphere 1005.0 14400 > th dose independent sin 21 NA
422 68.43 temperature 20.0 10 > th dose independent rect. 6 20
436 68.45 atmosphere 1000.0 270 > th dose independent rect. 22 6
451 68.45 wind 7.0 90 < th dose dependent rect. 23 7
479 68.49 temperature 25.0 14400 < th dose independent rect. 3 2
483 68.49 wind 3.0 30 > th dose independent rect. 10 11
488 68.50 wind 9.0 1440 < th dose independent rect. 1 6
500 68.51 atmosphere 1015.0 270 < th dose independent rect. 5 17
512 68.53 precipitation 0.1 14400 > th dose independent rect. 17 1
522 68.54 wind 3.0 43200 < th dose independent rect. 3 1
523 68.54 wind 1.0 43200 > th dose independent rect. 24 5
548 68.56 wind 3.0 90 > th dose independent rect. 11 7
549 68.56 precipitation 0.1 270 < th dose independent rect. 9 9
552 68.56 humidity 50.0 270 > th dose independent rect. 24 15
554 68.56 wind 9.0 10 < th dose dependent rect. 24 6
556 68.56 precipitation 0.1 270 < th dose dependent rect. 9 9
563 68.57 temperature 10.0 270 > th dose dependent rect. 18 15
565 68.58 wind 9.0 43200 < th dose independent rect. 18 1
573 68.58 wind 1.0 270 > th dose independent rect. 11 17
588 68.59 wind 1.0 43200 > th dose dependent rect. 24 4
596 68.60 atmosphere 1005.0 14400 < th dose independent sin 20 NA
597 68.60 precipitation 0.1 43200 > th dose independent rect. 19 1
606 68.60 humidity 70.0 10 > th dose independent rect. 17 16
612 68.61 precipitation 0.1 43200 < th dose independent rect. 19 1
613 68.61 precipitation 0.1 14400 < th dose independent rect. 13 2
623 68.61 precipitation 0.1 43200 < th dose dependent rect. 19 1
624 68.61 precipitation 0.1 14400 < th dose dependent rect. 13 2
640 68.63 wind 3.0 43200 > th dose independent rect. 3 1
645 68.63 precipitation 0.1 10 < th dose independent rect. 24 6
660 68.63 precipitation 0.1 10 < th dose dependent rect. 24 6
663 68.64 precipitation 0.1 14400 > th dose independent rect. 13 2
664 68.64 atmosphere 1000.0 10 > th dose independent rect. 24 6
665 68.64 precipitation 0.1 270 < th dose independent rect. 22 6
671 68.64 humidity 70.0 720 > th dose dependent rect. 21 2
674 68.64 precipitation 0.1 270 < th dose dependent rect. 22 6
685 68.65 humidity 90.0 14400 > th dose dependent rect. 5 3
692 68.66 atmosphere 995.0 270 > th dose independent rect. 9 9
705 68.66 radiation 20.0 270 < th dose dependent rect. 4 21
726 68.68 temperature 15.0 270 > th dose independent rect. 22 6
731 68.68 radiation 20.0 10 < th dose independent rect. 17 16
733 68.68 radiation 1.0 720 < th dose dependent rect. 5 6
781 68.71 humidity 70.0 720 > th dose dependent rect. 20 5
782 68.71 atmosphere 995.0 10 > th dose dependent rect. 24 6
787 68.72 humidity 80.0 43200 < th dose independent rect. 13 1
788 68.72 wind 5.0 10 < th dose independent rect. 24 6
811 68.73 precipitation 0.1 270 < th dose independent rect. 23 18
817 68.73 precipitation 0.1 270 < th dose dependent rect. 23 18
821 68.74 humidity 90.0 14400 < th dose independent rect. 13 3
837 68.75 wind 3.0 43200 > th dose independent rect. 8 1
858 68.75 temperature 30.0 10 < th dose dependent rect. 24 6
860 68.75 humidity 90.0 14400 > th dose dependent rect. 1 7
869 68.76 temperature 30.0 270 < th dose independent rect. 18 15
873 68.76 precipitation 0.1 10 < th dose independent rect. 6 18
877 68.76 wind 1.0 10 > th dose dependent sin 21 NA
886 68.76 precipitation 0.1 10 < th dose dependent rect. 6 18
887 68.77 wind 1.0 43200 < th dose independent rect. 24 5
888 68.77 temperature 15.0 10 > th dose independent rect. 24 6
911 68.78 radiation 1.0 270 < th dose independent rect. 5 18
912 68.78 precipitation 0.1 270 < th dose independent rect. 4 18
922 68.78 precipitation 0.1 270 < th dose dependent rect. 4 18
937 68.79 humidity 90.0 14400 > th dose dependent rect. 6 1
945 68.80 temperature 30.0 270 < th dose independent rect. 22 6
946 68.80 temperature 30.0 10 < th dose independent rect. 24 6
947 68.80 humidity 50.0 270 > th dose independent rect. 22 6
950 68.80 humidity 50.0 10 > th dose independent rect. 24 6
955 68.80 radiation 1.0 270 < th dose independent rect. 22 6
960 68.80 radiation 20.0 10 < th dose independent rect. 24 6
966 68.80 temperature 10.0 270 > th dose independent rect. 4 18
967 68.80 temperature 10.0 10 > th dose independent rect. 6 18
974 68.80 radiation 1.0 270 < th dose dependent rect. 22 6