BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os07g0425000 Os07g0425000|AK108531
(325 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os07g0425000 Biopterin transport-related protein BT1 family... 546 e-155
Os05g0389400 Biopterin transport-related protein BT1 family... 180 1e-45
Os01g0243200 Biopterin transport-related protein BT1 family... 121 8e-28
Os09g0423400 Biopterin transport-related protein BT1 family... 76 4e-14
Os04g0499100 Biopterin transport-related protein BT1 family... 70 3e-12
Os03g0795000 Biopterin transport-related protein BT1 family... 69 5e-12
Os05g0376501 Biopterin transport-related protein BT1 family... 65 5e-11
>Os07g0425000 Biopterin transport-related protein BT1 family protein
Length = 325
Score = 546 bits (1406), Expect = e-155, Method: Compositional matrix adjust.
Identities = 276/325 (84%), Positives = 276/325 (84%)
Query: 1 LIGNLGASVTEVVSDAVVTEFSRTQKAGVLQSYAFIIXXXXXXXXXXXXXXXXXRTQEPK 60
LIGNLGASVTEVVSDAVVTEFSRTQKAGVLQSYAFII RTQEPK
Sbjct: 1 LIGNLGASVTEVVSDAVVTEFSRTQKAGVLQSYAFIILAAGSLLGNLSGGYVLLRTQEPK 60
Query: 61 TMFSAFXXXXXXXXXXXXXTKETLPSSHRNWNICHVRTSLSDNLRKQFSNLRTAISEEQI 120
TMFSAF TKETLPSSHRNWNICHVRTSLSDNLRKQFSNLRTAISEEQI
Sbjct: 61 TMFSAFSILLGLQLALSLSTKETLPSSHRNWNICHVRTSLSDNLRKQFSNLRTAISEEQI 120
Query: 121 FYPLMWIMTSFAVVPILSGTMFCFQTQYLKLDPSVIGLSKVVGQVMVLSLTVLYNKYLKK 180
FYPLMWIMTSFAVVPILSGTMFCFQTQYLKLDPSVIGLSKVVGQVMVLSLTVLYNKYLKK
Sbjct: 121 FYPLMWIMTSFAVVPILSGTMFCFQTQYLKLDPSVIGLSKVVGQVMVLSLTVLYNKYLKK 180
Query: 181 IPLRRLVAGVQTMYALAVLSDLVLVKQVNLMLGIPNEIHVLCFSALAEAIAQFKVLPFSV 240
IPLRRLVAGVQTMYALAVLSDLVLVKQVNLMLGIPNEIHVLCFSALAEAIAQFKVLPFSV
Sbjct: 181 IPLRRLVAGVQTMYALAVLSDLVLVKQVNLMLGIPNEIHVLCFSALAEAIAQFKVLPFSV 240
Query: 241 LLSSQCPPGCEGSLFAFFTSGLVFSAXXXXXXXXXXXXXXXXXXXDYTSFPLCILLQSLA 300
LLSSQCPPGCEGSLFAFFTSGLVFSA DYTSFPLCILLQSLA
Sbjct: 241 LLSSQCPPGCEGSLFAFFTSGLVFSAIVSGVFGVGLSSLIGVSGGDYTSFPLCILLQSLA 300
Query: 301 ALVPLGWISFLPEKWTADDKILKPR 325
ALVPLGWISFLPEKWTADDKILKPR
Sbjct: 301 ALVPLGWISFLPEKWTADDKILKPR 325
>Os05g0389400 Biopterin transport-related protein BT1 family protein
Length = 438
Score = 180 bits (457), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 106/309 (34%), Positives = 161/309 (52%), Gaps = 9/309 (2%)
Query: 1 LIGNLGASVTEVVSDAVVTEFSR----TQKAGVLQSYAFIIXXXXXXXXXXXXXXXXXRT 56
L+ N GAS+ EV +DA+V E + + +G LQS+A++
Sbjct: 118 LLSNFGASICEVANDAIVAEAGKQATLSSGSGQLQSFAWMFGSSAGALGNLVGGIALSYF 177
Query: 57 QEPKTMFSAFXXXXXXXXXXXXXTKETLPSSHRNWNICHVRTSLSDNLRKQFSNLRTAIS 116
PK MF F T +P S S ++RKQ L A+
Sbjct: 178 -SPKIMFLFFAILLVLQFC----TTVAIPESSLQLPKADTNLSAVSSVRKQIKELSYALC 232
Query: 117 EEQIFYPLMWIMTSFAVVPILSGTMFCFQTQYLKLDPSVIGLSKVVGQVMVLSLTVLYNK 176
+IF+ ++W S+A +P L GTMF +QT+ L+LD SVIGLSKV GQV +L+ +V YNK
Sbjct: 233 MPEIFWSVIWFSLSYAAIPFLLGTMFFYQTEVLRLDSSVIGLSKVFGQVTLLAWSVAYNK 292
Query: 177 YLKKIPLRRLVAGVQTMYALAVLSDLVLVKQVNLMLGIPNEIHVLCFSALAEAIAQFKVL 236
Y K P +++++ +Q + AL +LSD++ V+ + GIP+ ++ + FS L E + FKVL
Sbjct: 293 YFKTTPAQKVLSVLQFLTALVMLSDVLFVQGIYRNFGIPDSMYTIVFSGLLEGLMLFKVL 352
Query: 237 PFSVLLSSQCPPGCEGSLFAFFTSGLVFSAXXXXXXXXXXXXXXXXXXXDYTSFPLCILL 296
PFSVL++ CP GCEGSL AF S L + D+++ P C+L+
Sbjct: 353 PFSVLVAKLCPSGCEGSLMAFVMSALALATIISGYLGVALAEFMGVSGGDFSALPTCLLI 412
Query: 297 QSLAALVPL 305
++ ++PL
Sbjct: 413 EAACTMLPL 421
>Os01g0243200 Biopterin transport-related protein BT1 family protein
Length = 430
Score = 121 bits (303), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 72/233 (30%), Positives = 121/233 (51%), Gaps = 2/233 (0%)
Query: 85 PSSHRNWNICHVRTSLSDNLRKQFSNLRTAISEEQIFYPLMWIMTSFAVVPILSGTMFCF 144
P H ++R LS L+ F +L TA + I P+ W S +P +S MF +
Sbjct: 197 PEDHDKNKSTNLRPYLS--LKSAFFSLCTAFKQPTILRPMAWFFFSNVAIPNISTVMFYY 254
Query: 145 QTQYLKLDPSVIGLSKVVGQVMVLSLTVLYNKYLKKIPLRRLVAGVQTMYALAVLSDLVL 204
QT+ L L+ S +G ++V+G ++ T +YN+Y K LR ++ A+ + D++L
Sbjct: 255 QTEVLHLEASFLGTARVIGWFSLMLGTYIYNRYFKHKKLRNILMFAHVGLAIIGVLDILL 314
Query: 205 VKQVNLMLGIPNEIHVLCFSALAEAIAQFKVLPFSVLLSSQCPPGCEGSLFAFFTSGLVF 264
V ++++ GI ++ VL SALA+AI QFK++PF +L CPPG EG+LFA F S F
Sbjct: 315 VLRLHVHYGITDKYMVLWGSALADAINQFKMMPFLILSGQLCPPGIEGTLFALFMSINNF 374
Query: 265 SAXXXXXXXXXXXXXXXXXXXDYTSFPLCILLQSLAALVPLGWISFLPEKWTA 317
+ + + L + +Q + L+P+G++ +P++ T
Sbjct: 375 GSTLGSFLGAALASALSISSAQFDNLALGLGVQLIGTLLPVGFLFLIPKEVTG 427
>Os09g0423400 Biopterin transport-related protein BT1 family protein
Length = 504
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 79/171 (46%), Gaps = 4/171 (2%)
Query: 156 IGLSKVVGQVMVLSLTVLYNKYLKKIPLRRLVAGVQTMYALAVLSDLVLVKQVNLMLGIP 215
+G+ +G V + ++Y+KYLK P R ++ Q +Y ++ L DL V + NL+LG+P
Sbjct: 298 VGMVHAIGAVASMVGVLVYHKYLKDYPFRSILFYAQLLYGVSGLLDLTFVLRWNLLLGVP 357
Query: 216 NEIHVLCFSALAEAIAQFKVLPFSVLLSSQCPPGCEGSLFAFFTSGLVFSAXXXXXXXXX 275
+ V A + + +++P VL + CPPG EG+ FA
Sbjct: 358 DAAFVTLEECCARVVGRVRLMPMMVLSTKLCPPGAEGTFFALLMCIDSAGMLAAKAGGAA 417
Query: 276 XXXXXXXXXXDYTSFPLCILLQSLAALVPLGWISFLPEKWTADD-KILKPR 325
D+ L +L+++L L L IS +P TAD +L PR
Sbjct: 418 VLRALRVTRTDFARLWLAVLVRNLLRLSTLAAISLVP---TADQTDVLLPR 465
>Os04g0499100 Biopterin transport-related protein BT1 family protein
Length = 527
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 80/158 (50%), Gaps = 3/158 (1%)
Query: 106 KQFSNLRTAISEEQIFYPLMWIMTSFAVVPILSGTMFCFQTQYL---KLDPSVIGLSKVV 162
K ++ + +++ P +++ S ++ + MF + T + IGL V
Sbjct: 240 KAIQSMGATLKCAEVWRPCVYMYVSLSLSLDIQAGMFYWYTDPIVGPGFSEEFIGLVYSV 299
Query: 163 GQVMVLSLTVLYNKYLKKIPLRRLVAGVQTMYALAVLSDLVLVKQVNLMLGIPNEIHVLC 222
G + L +LY LK P R ++ Q + +LA + DL++V ++N +GIP+ + +
Sbjct: 300 GSIGSLLGVLLYQISLKDCPFRGVLFWGQVLSSLAGMLDLIMVTRLNTRIGIPDYVFAVI 359
Query: 223 FSALAEAIAQFKVLPFSVLLSSQCPPGCEGSLFAFFTS 260
+++++ + + K LP VL S CPPG EG+ +A S
Sbjct: 360 DNSVSQMVGRLKWLPLLVLCSKLCPPGIEGTFYALLMS 397
>Os03g0795000 Biopterin transport-related protein BT1 family protein
Length = 464
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 83/160 (51%), Gaps = 3/160 (1%)
Query: 98 TSLSDNLRKQFSNLRTAISEEQIFYPLMWIMTSFAVVPILSGTMFCFQTQYLKLDPSVIG 157
+ L ++ ++ + +++ + IF P ++I + P MF F T L P +G
Sbjct: 237 SGLIESSKEHIMQIWSSVKQPNIFLPTLFIFL-WQATPQSDSAMFFFITNKLGFTPEFLG 295
Query: 158 LSKVVGQVMVLSLTVLYNKYLKKIPLRRLVAGVQTMYALAV-LSDLVLVKQVNLMLGIPN 216
+V + L +YN +LK++PLR++ V T++ A+ ++ ++LV +N +LGI +
Sbjct: 296 RVTLVTSIASLVGIGVYNSFLKEVPLRKIFF-VTTIFGSALGMTQVLLVTGLNRVLGISD 354
Query: 217 EIHVLCFSALAEAIAQFKVLPFSVLLSSQCPPGCEGSLFA 256
E + S + + Q +P VL + CPPG E +LFA
Sbjct: 355 EWFSIGDSLIITVLGQASFMPVLVLAAKLCPPGVEATLFA 394
>Os05g0376501 Biopterin transport-related protein BT1 family protein
Length = 407
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 64/115 (55%), Gaps = 4/115 (3%)
Query: 156 IGLSKVVGQVMVLSLTVLYNKYLKKIPLRRLVAGVQTMYALAVLSDLVLVKQVNLMLGIP 215
IGL VG + L +LY LK P R ++ Q + +LA + +L++V ++N +GIP
Sbjct: 153 IGLVYSVGSIGSLLGVLLYQISLKDYPFRGVLFWGQVLSSLAGMLNLIMVTRLNTRIGIP 212
Query: 216 NEIHVLCFSALAEAIAQFKVLPFSVLLSSQCPPGCEGSLFAFFTS----GLVFSA 266
+ + + +++++ + + K LP VL S CPPG EG+ +A S GL+ S
Sbjct: 213 DYVFAVIDNSVSQMVGRLKWLPLLVLCSKLCPPGIEGTFYALLMSIQNAGLLMSG 267
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.325 0.137 0.406
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 8,154,600
Number of extensions: 248123
Number of successful extensions: 770
Number of sequences better than 1.0e-10: 8
Number of HSP's gapped: 764
Number of HSP's successfully gapped: 8
Length of query: 325
Length of database: 17,035,801
Length adjustment: 101
Effective length of query: 224
Effective length of database: 11,762,187
Effective search space: 2634729888
Effective search space used: 2634729888
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 156 (64.7 bits)