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Os07g0425000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Biopterin transport-related protein BT1 family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.8 (0.04) R2 : 0.897
β1 : -- (--) R2dD : -- R2D : --
β2 : 5.77 (0.114) R2dC : 0.726 R2C : 0.831
β3 : -2.33 (0.24) R2dE : 0.0269 R2E : 0.146
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -1.02 (0.0841) R2dN8 : 0.0428 R2N8 : 0.0196
σ : 0.749
deviance : 258.6
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C
peak time of C : 7.83
E
wheather : radiation
threshold : 2.43
memory length : 122
response mode : < th
dose dependency : dose independent
G
type of G : rect.
peak or start time of G : 7.87
open length of G : 11

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose independent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
255.24 0.751 10.8 -0.36 5.76 -2.26 0.459 0.938 -1.04 7.82 2.38 115 7.98 11
255.51 0.744 10.8 -0.36 5.78 -2.32 0.172 -- -1.05 7.83 2.487 122 7.88 11
255.26 0.744 10.8 -0.324 5.76 -2.42 -- 0.881 -1.06 7.83 2.376 121 7.88 10.9
255.56 0.745 10.8 -0.339 5.78 -2.38 -- -- -1.05 7.83 2.44 122 7.88 10.9
1169.78 1.59 10.9 -0.00461 -- -3.94 -- -0.77 -1.16 -- 12.44 11 10 13
307.16 0.822 10.8 -0.306 6.29 -- 0.316 -- -0.994 7.71 -- -- -- --
307.44 0.821 10.8 -0.298 6.29 -- -- -- -0.994 7.7 -- -- -- --
847.98 1.36 11.3 -0.0849 -- -4.15 -- -- -1.63 -- 15.91 12 10.8 13.1
258.6 0.749 10.8 -- 5.77 -2.33 -- -- -1.02 7.83 2.43 122 7.87 11
2442.57 2.31 11 -0.216 -- -- -- -- -0.903 -- -- -- -- --
309.78 0.823 10.8 -- 6.29 -- -- -- -0.961 7.71 -- -- -- --
746.79 1.27 11 -- -- -3.98 -- -- -1.21 -- 30.23 2 12.4 12.6
2443.8 2.31 10.9 -- -- -- -- -- -0.879 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 258.33 humidity 50 10 > th dose dependent rect. 13 7
7 261.38 radiation 1 90 < th dose dependent rect. 8 11
16 261.93 radiation 1 90 < th dose independent rect. 8 11
24 262.83 temperature 30 90 < th dose independent rect. 13 7
30 264.30 radiation 1 90 < th dose independent rect. 23 21
35 265.50 radiation 1 30 < th dose independent rect. 1 19
36 265.59 radiation 10 90 < th dose dependent rect. 23 21
38 265.89 temperature 30 270 < th dose independent rect. 15 2
59 267.20 radiation 1 10 < th dose dependent rect. 1 19
74 267.77 radiation 1 10 < th dose dependent sin 0 NA
76 267.84 radiation 10 10 < th dose dependent rect. 8 12
91 268.59 humidity 60 90 > th dose independent rect. 13 7
95 268.75 radiation 1 30 < th dose independent sin 0 NA
101 269.00 radiation 1 30 > th dose independent sin 0 NA
102 269.01 radiation 1 10 < th dose dependent rect. 11 9
115 269.40 humidity 70 10 > th dose independent rect. 13 7
116 269.40 radiation 1 10 < th dose dependent rect. 13 7
124 269.55 radiation 10 43200 < th dose dependent rect. 21 5
125 269.59 humidity 50 10 > th dose dependent rect. 24 20
164 270.79 temperature 30 10 < th dose dependent rect. 14 6
212 271.71 radiation 1 10 < th dose dependent rect. 15 5
214 271.72 radiation 1 720 > th dose independent rect. 10 6
225 272.02 atmosphere 1000 30 > th dose dependent rect. 14 6
240 272.41 radiation 10 720 < th dose independent rect. 15 4
309 273.75 temperature 20 270 > th dose independent rect. 13 14
321 273.89 radiation 20 10 < th dose dependent rect. 7 23
325 273.93 radiation 1 30 > th dose independent rect. 17 23
331 274.03 temperature 20 30 > th dose independent rect. 14 15
354 274.40 humidity 60 270 > th dose independent rect. 14 3
361 274.49 atmosphere 1015 270 < th dose dependent rect. 20 1
400 275.11 atmosphere 1015 90 < th dose dependent rect. 20 5
409 275.21 temperature 30 270 < th dose independent rect. 23 19
416 275.31 temperature 30 90 < th dose independent rect. 1 19
453 275.82 humidity 60 10 > th dose dependent rect. 22 22
460 275.98 atmosphere 995 270 > th dose independent rect. 22 22
467 276.05 humidity 50 10 > th dose dependent rect. 9 11
472 276.10 temperature 20 10 > th dose independent rect. 16 13
480 276.17 humidity 50 270 > th dose dependent rect. 15 2
489 276.30 radiation 30 270 < th dose dependent rect. 15 2
540 276.71 atmosphere 1000 30 > th dose independent rect. 14 6
550 276.77 wind 9 270 < th dose dependent rect. 20 1
577 277.07 radiation 1 720 < th dose independent rect. 8 5
578 277.07 radiation 1 720 < th dose dependent rect. 8 5
584 277.12 atmosphere 995 90 > th dose independent rect. 1 19
587 277.13 radiation 10 10 < th dose dependent rect. 13 23
588 277.13 radiation 10 10 < th dose dependent rect. 15 23
592 277.16 radiation 10 10 < th dose dependent no NA NA
609 277.33 radiation 10 10 < th dose dependent rect. 11 23
643 277.66 radiation 10 1440 < th dose dependent rect. 21 8
678 277.92 atmosphere 1010 30 < th dose independent rect. 20 5
695 278.06 radiation 10 1440 > th dose independent rect. 11 1
703 278.12 atmosphere 1010 270 < th dose independent rect. 20 1
708 278.14 radiation 10 720 < th dose independent rect. 15 11
709 278.14 atmosphere 1000 270 > th dose independent rect. 13 14
710 278.14 humidity 90 720 < th dose dependent rect. 11 4
724 278.25 atmosphere 995 43200 < th dose dependent rect. 13 12
734 278.31 radiation 1 270 < th dose independent rect. 13 2
741 278.34 temperature 15 270 > th dose independent rect. 20 1
751 278.40 humidity 50 90 > th dose independent rect. 1 19
756 278.42 wind 7 270 < th dose independent rect. 20 1
764 278.48 radiation 40 720 < th dose dependent rect. 15 4
766 278.49 atmosphere 995 43200 > th dose independent rect. 21 19
796 278.71 humidity 80 30 > th dose independent rect. 1 19
825 278.94 radiation 10 1440 < th dose independent rect. 21 8
836 279.00 atmosphere 995 43200 < th dose dependent rect. 14 9
837 279.01 atmosphere 995 43200 < th dose independent rect. 18 22
841 279.03 humidity 80 720 > th dose independent rect. 12 1
848 279.07 humidity 80 720 > th dose dependent rect. 12 1
850 279.08 humidity 60 14400 > th dose independent rect. 21 5
863 279.14 atmosphere 995 43200 < th dose independent rect. 21 20
866 279.15 temperature 15 30 > th dose independent rect. 20 5
919 279.43 temperature 20 30 > th dose independent rect. 1 19
922 279.44 temperature 30 270 < th dose independent rect. 20 1
923 279.44 humidity 50 270 > th dose independent rect. 20 1
926 279.44 atmosphere 995 270 > th dose independent rect. 20 1
927 279.44 radiation 1 270 < th dose independent rect. 20 1
933 279.44 temperature 10 270 > th dose independent rect. 21 23
934 279.44 radiation 1 270 < th dose dependent rect. 20 1
940 279.47 radiation 1 1440 < th dose independent rect. 11 1
942 279.47 radiation 1 1440 < th dose dependent rect. 11 1
946 279.48 radiation 20 1440 < th dose dependent rect. 11 1
978 279.63 wind 7 90 < th dose independent rect. 20 5