BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os07g0425000 Os07g0425000|AK108531
(325 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G33280.1 | chr2:14106410-14107720 FORWARD LENGTH=409 244 4e-65
AT1G04570.1 | chr1:1246859-1248600 REVERSE LENGTH=543 239 2e-63
AT1G64890.1 | chr1:24109752-24111165 FORWARD LENGTH=443 162 3e-40
AT5G54860.1 | chr5:22284721-22287025 FORWARD LENGTH=492 110 1e-24
AT2G32040.1 | chr2:13635116-13637592 FORWARD LENGTH=561 74 1e-13
AT1G79710.1 | chr1:29995137-29996988 FORWARD LENGTH=498 70 1e-12
AT5G10820.1 | chr5:3420876-3423166 REVERSE LENGTH=504 70 2e-12
AT5G25050.1 | chr5:8632022-8633828 FORWARD LENGTH=500 64 9e-11
AT5G25040.2 | chr5:8622185-8623965 FORWARD LENGTH=518 61 1e-09
>AT2G33280.1 | chr2:14106410-14107720 FORWARD LENGTH=409
Length = 408
Score = 244 bits (624), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 132/312 (42%), Positives = 192/312 (61%), Gaps = 1/312 (0%)
Query: 1 LIGNLGASVTEVVSDAVVTEFSRTQKAGVLQSYAFIIXXXXXXXXXXXXXXXXXRTQEPK 60
L+ NLGAS+TEV DA+V E+ + LQSYA + +T P+
Sbjct: 57 LLSNLGASITEVSQDALVAEYGLRYQINGLQSYALMASAVGGILGNLLGGYCLLKT-PPR 115
Query: 61 TMFSAFXXXXXXXXXXXXXTKETLPSSHRNWNICHVRTSLSDNLRKQFSNLRTAISEEQI 120
+F AF +KE + R + +S+ ++KQF +L+ + ++I
Sbjct: 116 ILFLAFTALLSLQLIVSLSSKEESVNLPRIGEVTPEISSVLGIVKKQFLDLKGIVQVDEI 175
Query: 121 FYPLMWIMTSFAVVPILSGTMFCFQTQYLKLDPSVIGLSKVVGQVMVLSLTVLYNKYLKK 180
PL+WI++S A+VP+LSG++FC+QTQ L LDPSVIG+SKV+GQ+M+L LTV+Y++Y KK
Sbjct: 176 SQPLIWIVSSIALVPLLSGSVFCYQTQVLNLDPSVIGMSKVIGQLMLLCLTVVYDRYWKK 235
Query: 181 IPLRRLVAGVQTMYALAVLSDLVLVKQVNLMLGIPNEIHVLCFSALAEAIAQFKVLPFSV 240
+P+R L+ VQ +YA ++L D +LVKQ+NL GI N VLCFS++AE +AQFK+LPFSV
Sbjct: 236 LPMRALIHIVQLLYAFSLLFDYILVKQINLAFGISNTAFVLCFSSVAEILAQFKILPFSV 295
Query: 241 LLSSQCPPGCEGSLFAFFTSGLVFSAXXXXXXXXXXXXXXXXXXXDYTSFPLCILLQSLA 300
LL++ CP GCEGS+ +F S L S+ +Y++ P IL+QSLA
Sbjct: 296 LLANMCPGGCEGSITSFLASTLCLSSVVSGFTGVGMANMIGITSKNYSNLPAGILIQSLA 355
Query: 301 ALVPLGWISFLP 312
ALVPL +I ++P
Sbjct: 356 ALVPLWFIHYVP 367
>AT1G04570.1 | chr1:1246859-1248600 REVERSE LENGTH=543
Length = 542
Score = 239 bits (609), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 132/315 (41%), Positives = 188/315 (59%), Gaps = 11/315 (3%)
Query: 1 LIGNLGASVTEVVSDAVVTEFSRTQKAGVLQSYAFIIXXXXXXXXXXXXXXXXXRTQEPK 60
L+ NLGAS+TEV DA+V E+ + LQSYA ++ T PK
Sbjct: 190 LLSNLGASITEVAKDALVAEYGLRYRINGLQSYA-LMASAAGGVLGNLLGGYLLLTTPPK 248
Query: 61 TMFSAFXXXXXXXXXXXXXTKET---LPSSHRNWNICHVRTSLSDNLRKQFSNLRTAISE 117
F F +KE LP +S+ ++++KQ SNL+ AI
Sbjct: 249 ISFLVFSALLSLQLVVSLSSKEESFGLPRIAET-------SSVLESVKKQISNLKEAIQA 301
Query: 118 EQIFYPLMWIMTSFAVVPILSGTMFCFQTQYLKLDPSVIGLSKVVGQVMVLSLTVLYNKY 177
++I PL+W + S A+VP+LSG++FC+QTQ L LDPSVIG+SKV+GQ+M+L LTV+Y++Y
Sbjct: 302 DEISQPLIWAVVSIAMVPLLSGSVFCYQTQVLNLDPSVIGMSKVIGQLMLLCLTVVYDRY 361
Query: 178 LKKIPLRRLVAGVQTMYALAVLSDLVLVKQVNLMLGIPNEIHVLCFSALAEAIAQFKVLP 237
LK +P+R L+ +Q +Y L++L D +LVKQ+NL GI NE++VLCFS+LAE +AQFK+LP
Sbjct: 362 LKTLPMRPLIHIIQLLYGLSILLDYILVKQINLGFGISNEVYVLCFSSLAEILAQFKILP 421
Query: 238 FSVLLSSQCPPGCEGSLFAFFTSGLVFSAXXXXXXXXXXXXXXXXXXXDYTSFPLCILLQ 297
F+V L+S CP GCEGS+ +F S L S +Y++ IL+Q
Sbjct: 422 FAVRLASMCPQGCEGSVTSFLASTLCLSQIVSAFLGVGLANLIGITSSNYSNLSSGILIQ 481
Query: 298 SLAALVPLGWISFLP 312
SLAAL PL ++ +P
Sbjct: 482 SLAALAPLCFMHLVP 496
>AT1G64890.1 | chr1:24109752-24111165 FORWARD LENGTH=443
Length = 442
Score = 162 bits (409), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 99/324 (30%), Positives = 167/324 (51%), Gaps = 12/324 (3%)
Query: 1 LIGNLGASVTEVVSDAVVTEFSRTQ----KAGVLQSYAFIIXXXXXXXXXXXXXXXXXRT 56
L+ NLGAS+ EV +DA+V E + + ++G L S+ +++ +T
Sbjct: 122 LLSNLGASLVEVANDAIVAESGKQKTSETQSGELPSFVWMVSSLGGILGNLLGGIAI-KT 180
Query: 57 QEPKTMFSAFXXXXXXXXXXXXXTKETLPSSHRNWNICHVRTSLSDNLRKQFSNLRTAIS 116
++ F F +E ++ N+ S + +RK S+L +
Sbjct: 181 FSAQSTFLVFGILALLQFLVTINIRE------KSLNLPE-NPSPAGGIRKHLSDLSHVLR 233
Query: 117 EEQIFYPLMWIMTSFAVVPILSGTMFCFQTQYLKLDPSVIGLSKVVGQVMVLSLTVLYNK 176
+ +I Y + WI S AVVP+L+GTMF +QT++LK+D S++G+SKV GQ+ +L YN+
Sbjct: 234 KPEISYSIAWIAVSTAVVPVLTGTMFFYQTKFLKIDASLLGISKVFGQIAMLLWGFAYNR 293
Query: 177 YLKKIPLRRLVAGVQTMYALAVLSDLVLVKQVNLMLGIPNEIHVLCFSALAEAIAQFKVL 236
+LK + R+L+ +Q A V+SDL+ VK V LG+ + ++VL FS E + FK+L
Sbjct: 294 WLKAMRPRKLLTAIQVTIAFFVISDLLFVKGVYRDLGVSDSVYVLFFSGFLETLFYFKIL 353
Query: 237 PFSVLLSSQCPPGCEGSLFAFFTSGLVFSAXXXXXXXXXXXXXXXXXXXDYTSFPLCILL 296
PF+VL++ CPPGCEGSL AF S + + D++ F + +
Sbjct: 354 PFTVLMARLCPPGCEGSLMAFVMSAIALAFIVSGYLGIVLASFVGVTEDDFSGFTRGLAI 413
Query: 297 QSLAALVPLGWISFLPEKWTADDK 320
++ +PL S++ ++ +K
Sbjct: 414 EACCVGIPLILTSWIYDEAETKEK 437
>AT5G54860.1 | chr5:22284721-22287025 FORWARD LENGTH=492
Length = 491
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 57/151 (37%), Positives = 89/151 (58%)
Query: 110 NLRTAISEEQIFYPLMWIMTSFAVVPILSGTMFCFQTQYLKLDPSVIGLSKVVGQVMVLS 169
L A + I P+ W + VP LS MF +QT+ L+LD + +G ++VVG + ++
Sbjct: 280 GLGRAFKQPIILRPMAWFFIAHITVPNLSTVMFYYQTEVLQLDAAFLGTARVVGWLGLMF 339
Query: 170 LTVLYNKYLKKIPLRRLVAGVQTMYALAVLSDLVLVKQVNLMLGIPNEIHVLCFSALAEA 229
T +YN+YL+ + LR+ + ++ +L D+VLV + N+ G+ ++ VL SAL +A
Sbjct: 340 GTFIYNRYLQDMTLRKSLLFAHIGLSVTILLDMVLVSRANVGYGVSDKTMVLFGSALGDA 399
Query: 230 IAQFKVLPFSVLLSSQCPPGCEGSLFAFFTS 260
I Q K +PF +L CPPG EG+LFA F S
Sbjct: 400 INQLKFMPFLILSGRLCPPGIEGTLFALFMS 430
>AT2G32040.1 | chr2:13635116-13637592 FORWARD LENGTH=561
Length = 560
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 82/173 (47%), Gaps = 3/173 (1%)
Query: 85 PSSHRNWNICHVRTSLSDNLRKQFSNLRTAISEEQIFYPLMWIMTSFAVVPILSGTMFCF 144
P+S + NI + ++ L AI + +F P ++I + P MF F
Sbjct: 315 PASGQKENITLLSPGFLQTSKQNMIQLWGAIKQPNVFLPTLFIFL-WQATPHSDSAMFYF 373
Query: 145 QTQYLKLDPSVIGLSKVVGQVMVLSLTVLYNKYLKKIPLRRLVAGVQTMYALAV-LSDLV 203
T L P +G K+V + L LYN +LK +PLR++ V T++ + ++ ++
Sbjct: 374 TTNKLGFTPEFLGRVKLVTSIASLLGVGLYNGFLKTVPLRKIFL-VTTIFGTGLGMTQVI 432
Query: 204 LVKQVNLMLGIPNEIHVLCFSALAEAIAQFKVLPFSVLLSSQCPPGCEGSLFA 256
LV N LGI +E + S + +AQ +P VL + CP G E +LFA
Sbjct: 433 LVSGFNRQLGISDEWFAIGDSLILTVLAQASFMPVLVLAARLCPEGMEATLFA 485
>AT1G79710.1 | chr1:29995137-29996988 FORWARD LENGTH=498
Length = 497
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 97/221 (43%), Gaps = 5/221 (2%)
Query: 97 RTSLSDNLRKQFSNLRTAISEEQIFYPLMWIMTSFAVVPILSGTMFCFQTQYLKLDPS-- 154
R ++D S + +++ P ++++ S AV + MF + T K PS
Sbjct: 242 RKHVNDKFLDAGSAIWKTFQYGEVWRPCLFMLLSAAVSLHIHEGMFYWYTDS-KDGPSFS 300
Query: 155 --VIGLSKVVGQVMVLSLTVLYNKYLKKIPLRRLVAGVQTMYALAVLSDLVLVKQVNLML 212
+G G + L +LY +LK P R +V ++ L+ DL+LV ++NL L
Sbjct: 301 KEAVGSIMSFGAIGSLVGILLYQNFLKNFPFRNVVFWALSLSVLSGFLDLILVLRINLKL 360
Query: 213 GIPNEIHVLCFSALAEAIAQFKVLPFSVLLSSQCPPGCEGSLFAFFTSGLVFSAXXXXXX 272
G+P+ ++ ++ I++ K LP VL S CP G EG+ FA S
Sbjct: 361 GLPDYFFIVVDEFVSHMISRIKWLPLLVLSSKLCPAGMEGTFFALLMSIEHIGHLVSSWG 420
Query: 273 XXXXXXXXXXXXXDYTSFPLCILLQSLAALVPLGWISFLPE 313
+ + L I+++SL ++P+G + +P
Sbjct: 421 GGVLLHALKVTRTQFDNLWLVIVIRSLLRVIPIGLVFLIPN 461
>AT5G10820.1 | chr5:3420876-3423166 REVERSE LENGTH=504
Length = 503
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 79/164 (48%)
Query: 156 IGLSKVVGQVMVLSLTVLYNKYLKKIPLRRLVAGVQTMYALAVLSDLVLVKQVNLMLGIP 215
+G+ VG + + ++Y+K LK R ++ Q +Y + + DLV +K+ NL LGIP
Sbjct: 315 VGIIYAVGALASMFGVLIYHKKLKGYSFRNILFFAQLLYVFSGMLDLVFIKRWNLTLGIP 374
Query: 216 NEIHVLCFSALAEAIAQFKVLPFSVLLSSQCPPGCEGSLFAFFTSGLVFSAXXXXXXXXX 275
+ + V+ + + I++ + +P VL + CP G EG+ FAF F
Sbjct: 375 DSLFVITEESFTKMISKIRWIPMVVLSTRLCPLGIEGTFFAFLMCIDSFGQLASKWGGGF 434
Query: 276 XXXXXXXXXXDYTSFPLCILLQSLAALVPLGWISFLPEKWTADD 319
D+ + L IL++++ LV + ++ +P+ DD
Sbjct: 435 VLHAFGVTRHDFGNLWLVILIRNILRLVTVCFVFLVPDSDHLDD 478
>AT5G25050.1 | chr5:8632022-8633828 FORWARD LENGTH=500
Length = 499
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 56/105 (53%)
Query: 156 IGLSKVVGQVMVLSLTVLYNKYLKKIPLRRLVAGVQTMYALAVLSDLVLVKQVNLMLGIP 215
+G +G + + LY LK P R L Q ++AL+ + DL+LV ++NL G+P
Sbjct: 300 VGFILSIGSIGSILAATLYQLVLKDHPFRGLCLWTQLLFALSGMLDLILVFRLNLKFGLP 359
Query: 216 NEIHVLCFSALAEAIAQFKVLPFSVLLSSQCPPGCEGSLFAFFTS 260
+ + ++ +++ I + K +P VL S CP G EG+ FA S
Sbjct: 360 DYLFIVVDEIVSQMIGRLKWMPLLVLTSKLCPHGIEGTFFALLMS 404
>AT5G25040.2 | chr5:8622185-8623965 FORWARD LENGTH=518
Length = 517
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 63/125 (50%), Gaps = 8/125 (6%)
Query: 136 ILSGTMFCFQTQYLKLDPSVIGLSKVVGQVMVLSLTVLYNKYLKKIPLRRLVAGVQTMYA 195
+L + CFQ +G +G + + +LYN LK P R+L Q ++A
Sbjct: 311 MLKAFLVCFQ--------ETVGFILSIGSIGSILGVLLYNLRLKDHPFRKLFLWTQLLFA 362
Query: 196 LAVLSDLVLVKQVNLMLGIPNEIHVLCFSALAEAIAQFKVLPFSVLLSSQCPPGCEGSLF 255
L+ + DL+LV ++NL G+P+ + ++ +++ I + + VL + CP G EG+ F
Sbjct: 363 LSGMFDLILVLRLNLKFGLPDYLFIVVDGIVSKMIIRLTWMVIFVLNTKLCPHGIEGTFF 422
Query: 256 AFFTS 260
A S
Sbjct: 423 ALLMS 427
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.325 0.137 0.406
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 5,469,011
Number of extensions: 175302
Number of successful extensions: 453
Number of sequences better than 1.0e-05: 9
Number of HSP's gapped: 448
Number of HSP's successfully gapped: 9
Length of query: 325
Length of database: 11,106,569
Length adjustment: 99
Effective length of query: 226
Effective length of database: 8,392,385
Effective search space: 1896679010
Effective search space used: 1896679010
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 112 (47.8 bits)