Os03g0795000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Biopterin transport-related protein BT1 family protein.
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Os03g0795000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Biopterin transport-related protein BT1 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 45.71 | 0.318 | 9.92 | 0.841 | 1.54 | -1.81 | -0.0367 | 2.16 | -0.055 | 9.45 | 17.9 | 327 | -- | -- |
| 49.41 | 0.327 | 9.96 | 0.444 | 1.63 | -1.75 | -0.107 | -- | -0.171 | 9.5 | 17.52 | 252 | -- | -- |
| 45.71 | 0.315 | 9.91 | 0.843 | 1.55 | -1.8 | -- | 2.18 | -0.0549 | 9.46 | 17.97 | 321 | -- | -- |
| 49.4 | 0.327 | 9.96 | 0.442 | 1.63 | -1.78 | -- | -- | -0.168 | 9.53 | 17.3 | 252 | -- | -- |
| 134.49 | 0.54 | 9.9 | 1.23 | -- | -2.58 | -- | 2.92 | 0.16 | -- | 20.49 | 640 | -- | -- |
| 92.85 | 0.452 | 10 | 0.0282 | 1.88 | -- | -0.0863 | -- | -0.457 | 8.33 | -- | -- | -- | -- |
| 92.88 | 0.451 | 10 | 0.0257 | 1.88 | -- | -- | -- | -0.457 | 8.34 | -- | -- | -- | -- |
| 140.2 | 0.551 | 9.97 | 0.736 | -- | -2.69 | -- | -- | 0.0166 | -- | 17.55 | 617 | -- | -- |
| 54.21 | 0.343 | 9.98 | -- | 1.63 | -1.64 | -- | -- | -0.256 | 9.41 | 17.2 | 250 | -- | -- |
| 289.22 | 0.795 | 10.1 | 0.0372 | -- | -- | -- | -- | -0.437 | -- | -- | -- | -- | -- |
| 92.89 | 0.451 | 10 | -- | 1.88 | -- | -- | -- | -0.46 | 8.34 | -- | -- | -- | -- |
| 152.91 | 0.576 | 9.99 | -- | -- | -2.33 | -- | -- | -0.103 | -- | 19.04 | 611 | -- | -- |
| 289.26 | 0.794 | 10.1 | -- | -- | -- | -- | -- | -0.441 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 46.28 | temperature | 20 | 270 | > th | dose dependent | rect. | 13 | 23 |
| 3 | 46.81 | temperature | 15 | 270 | > th | dose dependent | rect. | 5 | 23 |
| 6 | 47.29 | temperature | 30 | 1440 | < th | dose dependent | rect. | 4 | 5 |
| 7 | 47.29 | temperature | 15 | 1440 | > th | dose dependent | rect. | 3 | 6 |
| 13 | 47.51 | temperature | 15 | 270 | > th | dose dependent | no | NA | NA |
| 27 | 47.71 | temperature | 25 | 1440 | < th | dose dependent | rect. | 6 | 3 |
| 36 | 47.77 | temperature | 30 | 270 | < th | dose dependent | rect. | 2 | 23 |
| 41 | 47.82 | temperature | 15 | 270 | > th | dose dependent | rect. | 21 | 23 |
| 48 | 47.85 | temperature | 15 | 1440 | > th | dose dependent | rect. | 20 | 14 |
| 49 | 47.87 | temperature | 30 | 270 | < th | dose dependent | no | NA | NA |
| 64 | 47.92 | temperature | 25 | 1440 | < th | dose dependent | rect. | 7 | 1 |
| 68 | 47.94 | temperature | 30 | 1440 | < th | dose dependent | rect. | 20 | 14 |
| 70 | 47.95 | temperature | 30 | 270 | < th | dose dependent | rect. | 15 | 23 |
| 89 | 48.02 | temperature | 30 | 270 | < th | dose dependent | rect. | 10 | 23 |
| 115 | 48.09 | temperature | 30 | 270 | < th | dose dependent | rect. | 18 | 23 |
| 135 | 48.16 | temperature | 15 | 1440 | > th | dose dependent | sin | 9 | NA |
| 141 | 48.17 | temperature | 30 | 270 | < th | dose dependent | rect. | 12 | 23 |
| 168 | 48.27 | temperature | 30 | 1440 | < th | dose dependent | sin | 8 | NA |
| 440 | 49.10 | temperature | 10 | 720 | > th | dose dependent | rect. | 22 | 21 |
| 480 | 49.24 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 13 |
| 533 | 49.39 | temperature | 15 | 1440 | > th | dose dependent | rect. | 21 | 2 |
| 599 | 49.54 | temperature | 30 | 1440 | < th | dose dependent | rect. | 21 | 2 |
| 653 | 49.65 | radiation | 1 | 43200 | > th | dose independent | rect. | 18 | 11 |
| 948 | 50.22 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 13 |
| 971 | 50.26 | temperature | 30 | 1440 | < th | dose dependent | no | NA | NA |