Os05g0389400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Biopterin transport-related protein BT1 family protein.
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Os05g0389400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Biopterin transport-related protein BT1 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 52.68 | 0.341 | 11.2 | -1.38 | 1.32 | -0.588 | 0.494 | 0.701 | -0.261 | 8.13 | 73.61 | 1224 | -- | -- |
| 53.71 | 0.341 | 11.2 | -1.29 | 1.34 | -0.546 | 0.615 | -- | -0.245 | 8.13 | 73.21 | 1192 | -- | -- |
| 53.32 | 0.34 | 11.2 | -1.39 | 1.33 | -0.597 | -- | 0.882 | -0.265 | 8.18 | 72.94 | 1201 | -- | -- |
| 54.67 | 0.344 | 11.2 | -1.26 | 1.34 | -0.57 | -- | -- | -0.232 | 8.19 | 73.44 | 1192 | -- | -- |
| 141.32 | 0.554 | 11.2 | -1.4 | -- | -0.562 | -- | 0.983 | -0.245 | -- | 73.83 | 1387 | -- | -- |
| 64.02 | 0.375 | 11.2 | -1.17 | 1.28 | -- | 0.563 | -- | -0.159 | 7.75 | -- | -- | -- | -- |
| 64.92 | 0.377 | 11.2 | -1.16 | 1.28 | -- | -- | -- | -0.159 | 7.77 | -- | -- | -- | -- |
| 143.17 | 0.557 | 11.2 | -1.24 | -- | -0.532 | -- | -- | -0.215 | -- | 73 | 1402 | -- | -- |
| 89.83 | 0.441 | 11.1 | -- | 1.57 | -0.702 | -- | -- | -0.123 | 8.25 | 87.4 | 823 | -- | -- |
| 153.24 | 0.578 | 11.2 | -1.14 | -- | -- | -- | -- | -0.141 | -- | -- | -- | -- | -- |
| 100.12 | 0.468 | 11.1 | -- | 1.27 | -- | -- | -- | -0.0305 | 7.83 | -- | -- | -- | -- |
| 155.41 | 0.581 | 11.2 | -- | -- | 0.838 | -- | -- | -0.00724 | -- | 76.85 | 624 | -- | -- |
| 187.51 | 0.639 | 11.2 | -- | -- | -- | -- | -- | -0.0147 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 52.23 | radiation | 10 | 1440 | > th | dose independent | rect. | 15 | 2 |
| 2 | 52.24 | radiation | 20 | 1440 | < th | dose dependent | rect. | 15 | 2 |
| 8 | 52.34 | radiation | 30 | 1440 | < th | dose dependent | rect. | 15 | 12 |
| 13 | 52.37 | radiation | 1 | 1440 | > th | dose dependent | rect. | 15 | 2 |
| 14 | 52.37 | radiation | 30 | 1440 | < th | dose dependent | rect. | 15 | 10 |
| 17 | 52.38 | radiation | 30 | 1440 | < th | dose dependent | rect. | 15 | 5 |
| 22 | 52.39 | radiation | 30 | 1440 | < th | dose dependent | rect. | 15 | 7 |
| 58 | 52.75 | humidity | 90 | 1440 | < th | dose dependent | rect. | 2 | 15 |
| 81 | 53.04 | humidity | 90 | 1440 | < th | dose dependent | sin | 2 | NA |
| 97 | 53.10 | radiation | 10 | 1440 | > th | dose independent | rect. | 15 | 16 |
| 98 | 53.10 | radiation | 10 | 1440 | < th | dose dependent | sin | 15 | NA |
| 103 | 53.10 | humidity | 50 | 720 | > th | dose dependent | rect. | 5 | 21 |
| 110 | 53.12 | humidity | 90 | 1440 | < th | dose dependent | rect. | 9 | 8 |
| 119 | 53.14 | humidity | 50 | 1440 | > th | dose dependent | rect. | 3 | 14 |
| 139 | 53.21 | humidity | 80 | 1440 | < th | dose dependent | rect. | 11 | 7 |
| 206 | 53.27 | radiation | 10 | 1440 | < th | dose dependent | rect. | 11 | 19 |
| 215 | 53.29 | humidity | 90 | 1440 | < th | dose dependent | rect. | 11 | 2 |
| 224 | 53.30 | radiation | 10 | 1440 | < th | dose dependent | rect. | 13 | 17 |
| 233 | 53.32 | humidity | 50 | 1440 | > th | dose dependent | rect. | 9 | 8 |
| 301 | 53.37 | humidity | 80 | 1440 | < th | dose dependent | rect. | 11 | 23 |
| 303 | 53.38 | humidity | 80 | 1440 | < th | dose dependent | no | NA | NA |
| 323 | 53.38 | humidity | 80 | 1440 | < th | dose dependent | rect. | 15 | 23 |
| 324 | 53.39 | humidity | 60 | 1440 | > th | dose independent | rect. | 15 | 2 |
| 333 | 53.40 | humidity | 50 | 1440 | > th | dose dependent | sin | 1 | NA |
| 335 | 53.40 | humidity | 70 | 1440 | < th | dose dependent | rect. | 15 | 2 |
| 344 | 53.41 | humidity | 50 | 1440 | > th | dose dependent | rect. | 11 | 2 |
| 462 | 53.56 | humidity | 50 | 720 | > th | dose dependent | rect. | 7 | 19 |
| 502 | 53.65 | humidity | 50 | 720 | > th | dose dependent | rect. | 11 | 15 |
| 507 | 53.66 | radiation | 10 | 1440 | < th | dose dependent | rect. | 9 | 9 |
| 512 | 53.66 | radiation | 10 | 1440 | < th | dose dependent | rect. | 9 | 18 |
| 516 | 53.67 | radiation | 10 | 1440 | < th | dose dependent | rect. | 9 | 11 |
| 525 | 53.68 | radiation | 20 | 1440 | < th | dose independent | rect. | 15 | 14 |
| 539 | 53.68 | radiation | 10 | 1440 | < th | dose dependent | rect. | 11 | 16 |
| 543 | 53.69 | radiation | 20 | 1440 | < th | dose independent | rect. | 15 | 12 |
| 546 | 53.69 | radiation | 10 | 1440 | < th | dose dependent | rect. | 11 | 7 |
| 561 | 53.70 | radiation | 20 | 1440 | < th | dose independent | rect. | 15 | 3 |
| 566 | 53.70 | radiation | 10 | 1440 | < th | dose dependent | rect. | 11 | 9 |
| 569 | 53.70 | radiation | 10 | 1440 | < th | dose dependent | rect. | 11 | 11 |
| 574 | 53.70 | radiation | 10 | 1440 | < th | dose dependent | rect. | 11 | 14 |
| 585 | 53.72 | radiation | 20 | 1440 | < th | dose independent | rect. | 15 | 5 |
| 586 | 53.72 | radiation | 20 | 1440 | < th | dose independent | rect. | 15 | 10 |
| 596 | 53.73 | radiation | 20 | 1440 | < th | dose independent | rect. | 15 | 7 |
| 769 | 53.93 | radiation | 10 | 1440 | > th | dose independent | sin | 14 | NA |
| 897 | 54.06 | humidity | 60 | 1440 | < th | dose independent | rect. | 14 | 3 |
| 940 | 54.11 | humidity | 60 | 1440 | > th | dose independent | rect. | 14 | 21 |
| 978 | 54.14 | humidity | 50 | 1440 | > th | dose dependent | rect. | 15 | 1 |