FiT-DB / Search/ Help/ Sample detail

Os01g0243200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Biopterin transport-related protein BT1 family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.69 (0.0171) R2 : 0.538
β1 : 1.19 (0.0627) R2dD : 0.376 R2D : 0.168
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.605 (0.0366) R2dN8 : 0.371 R2N8 : 0.162
σ : 0.322
deviance : 47.34
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
26.99 0.244 9.67 1.21 0.605 0.328 -0.243 0.112 0.618 8.18 18.4 96 -- --
27.04 0.242 9.67 1.2 0.605 0.328 -0.297 -- 0.617 8.18 18.39 95 -- --
27.14 0.243 9.67 1.2 0.605 0.32 -- 0.198 0.618 8.14 18.39 95 -- --
27.32 0.243 9.67 1.19 0.606 0.328 -- -- 0.619 8.18 18.4 95 -- --
34.29 0.273 9.69 1.01 -- 0.454 -- 0.461 0.574 -- 6.6 795 -- --
30.31 0.258 9.68 1.18 0.571 -- -0.232 -- 0.592 6.55 -- -- -- --
30.44 0.258 9.68 1.17 0.57 -- -- -- 0.593 6.51 -- -- -- --
31.03 0.259 9.69 1.18 -- 0.709 -- -- 0.613 -- 4.72 806 -- --
64.25 0.373 9.7 -- 0.534 0.344 -- -- 0.46 7.33 39.83 107 -- --
47.34 0.322 9.69 1.19 -- -- -- -- 0.605 -- -- -- -- --
66.74 0.382 9.71 -- 0.585 -- -- -- 0.462 6.39 -- -- -- --
66.56 0.38 9.7 -- -- 0.716 -- -- 0.521 -- 7.88 789 -- --
84.55 0.429 9.72 -- -- -- -- -- 0.473 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 25.36 atmosphere 1000.0 270 > th dose independent rect. 2 17
2 25.39 atmosphere 1000.0 10 > th dose independent rect. 4 17
3 25.45 atmosphere 1000.0 270 > th dose independent rect. 11 9
9 25.65 atmosphere 1000.0 270 > th dose independent rect. 11 20
12 25.70 radiation 40.0 270 < th dose independent rect. 10 21
15 25.73 atmosphere 1000.0 270 > th dose independent rect. 13 17
23 25.80 atmosphere 1000.0 10 > th dose independent rect. 12 20
39 25.98 atmosphere 1000.0 10 > th dose independent rect. 15 17
45 26.05 radiation 10.0 30 > th dose independent rect. 8 9
47 26.05 radiation 20.0 90 < th dose independent rect. 3 17
52 26.09 radiation 30.0 90 < th dose dependent rect. 3 16
53 26.10 atmosphere 995.0 270 > th dose dependent rect. 11 9
54 26.11 atmosphere 1000.0 10 > th dose independent rect. 17 15
61 26.15 radiation 40.0 270 < th dose independent rect. 11 8
63 26.16 atmosphere 1000.0 10 > th dose independent rect. 12 9
100 26.26 radiation 20.0 10 < th dose dependent rect. 4 17
106 26.30 radiation 40.0 10 < th dose dependent rect. 4 17
143 26.45 wind 7.0 270 < th dose independent rect. 14 16
162 26.48 wind 1.0 270 > th dose independent rect. 6 9
172 26.51 atmosphere 1000.0 10 > th dose independent rect. 12 22
173 26.51 radiation 20.0 30 < th dose dependent sin 0 NA
180 26.53 radiation 40.0 270 < th dose independent rect. 1 17
181 26.54 wind 5.0 270 < th dose independent rect. 1 6
183 26.54 temperature 15.0 270 > th dose independent rect. 14 16
190 26.55 radiation 10.0 10 < th dose independent rect. 4 17
192 26.56 atmosphere 1000.0 10 > th dose independent rect. 12 11
195 26.56 atmosphere 995.0 10 > th dose dependent rect. 12 9
212 26.58 radiation 40.0 270 < th dose dependent rect. 1 17
222 26.60 radiation 40.0 10 < th dose dependent rect. 12 20
234 26.63 wind 1.0 43200 < th dose independent rect. 9 2
241 26.64 precipitation 0.1 270 < th dose independent rect. 6 9
246 26.64 precipitation 0.1 270 < th dose dependent rect. 6 9
249 26.64 radiation 40.0 90 < th dose dependent rect. 13 19
250 26.65 wind 5.0 30 < th dose independent rect. 3 5
254 26.66 temperature 30.0 270 < th dose independent rect. 18 8
255 26.66 temperature 10.0 270 > th dose independent rect. 6 9
256 26.66 atmosphere 1015.0 270 < th dose independent rect. 6 9
260 26.66 wind 7.0 270 < th dose independent rect. 2 17
267 26.67 wind 5.0 270 < th dose independent rect. 3 2
268 26.67 atmosphere 1010.0 270 < th dose independent rect. 1 6
276 26.68 precipitation 0.1 270 < th dose independent rect. 7 18
279 26.68 precipitation 0.1 270 < th dose dependent rect. 7 18
282 26.69 atmosphere 1000.0 270 > th dose independent rect. 1 6
283 26.69 precipitation 0.1 270 < th dose independent rect. 19 7
286 26.69 precipitation 0.1 270 < th dose dependent rect. 19 7
288 26.70 wind 9.0 270 < th dose independent rect. 6 9
295 26.71 wind 5.0 270 < th dose independent rect. 2 4
303 26.71 radiation 20.0 270 < th dose dependent rect. 1 14
310 26.72 radiation 20.0 90 < th dose independent rect. 9 23
312 26.72 wind 9.0 270 < th dose dependent rect. 1 6
321 26.73 atmosphere 995.0 270 > th dose independent rect. 6 8
331 26.74 humidity 60.0 270 > th dose independent rect. 18 8
334 26.74 wind 7.0 10 < th dose independent rect. 17 15
345 26.75 wind 1.0 10 > th dose independent rect. 8 9
351 26.75 radiation 20.0 270 < th dose dependent rect. 1 10
365 26.76 atmosphere 995.0 30 > th dose dependent rect. 3 5
373 26.77 wind 1.0 43200 > th dose independent rect. 9 2
374 26.77 temperature 25.0 270 < th dose independent rect. 1 6
375 26.77 precipitation 0.1 270 < th dose independent rect. 1 6
380 26.77 precipitation 0.1 270 < th dose dependent rect. 1 6
384 26.77 radiation 40.0 90 < th dose dependent rect. 15 17
385 26.78 atmosphere 1000.0 30 > th dose independent rect. 3 5
386 26.78 wind 9.0 270 < th dose independent rect. 19 7
387 26.78 temperature 10.0 270 > th dose independent rect. 19 7
390 26.78 atmosphere 995.0 270 > th dose independent rect. 19 7
391 26.78 radiation 1.0 270 < th dose independent rect. 19 7
398 26.78 temperature 10.0 270 > th dose independent rect. 2 17
399 26.78 atmosphere 1015.0 270 < th dose independent rect. 2 17
403 26.78 radiation 20.0 270 < th dose dependent sin 5 NA
405 26.78 radiation 1.0 270 < th dose dependent rect. 19 7
417 26.79 temperature 25.0 270 < th dose independent rect. 3 2
420 26.79 precipitation 0.1 270 < th dose independent rect. 2 17
425 26.79 precipitation 0.1 270 < th dose independent rect. 5 22
426 26.79 wind 9.0 30 < th dose dependent rect. 3 5
429 26.79 precipitation 0.1 270 < th dose dependent rect. 2 17
432 26.79 precipitation 0.1 270 < th dose dependent rect. 5 22
436 26.80 temperature 15.0 10 > th dose independent rect. 17 15
456 26.81 atmosphere 995.0 90 > th dose dependent rect. 3 17
459 26.81 radiation 40.0 90 < th dose dependent rect. 11 23
461 26.82 temperature 10.0 270 > th dose independent rect. 1 6
464 26.82 humidity 50.0 270 > th dose independent rect. 1 6
468 26.82 radiation 30.0 270 < th dose independent rect. 1 6
482 26.82 temperature 10.0 270 > th dose independent rect. 7 17
499 26.83 precipitation 0.1 10 < th dose independent rect. 8 19
500 26.83 radiation 40.0 270 < th dose dependent rect. 1 6
504 26.83 precipitation 0.1 10 < th dose dependent rect. 8 19
505 26.84 atmosphere 1000.0 270 > th dose independent rect. 3 2
507 26.84 precipitation 0.1 30 < th dose independent rect. 3 5
509 26.84 radiation 20.0 90 < th dose independent rect. 3 8
515 26.84 precipitation 0.1 30 < th dose dependent rect. 3 5
524 26.85 radiation 10.0 10 > th dose independent sin 0 NA
534 26.85 humidity 50.0 90 > th dose dependent rect. 20 7
535 26.85 atmosphere 995.0 10 > th dose dependent rect. 4 17
545 26.86 precipitation 0.1 270 < th dose independent rect. 6 20
547 26.86 wind 9.0 270 < th dose dependent rect. 3 2
557 26.86 precipitation 0.1 270 < th dose dependent rect. 6 20
576 26.87 radiation 40.0 90 < th dose dependent rect. 9 23
578 26.88 temperature 10.0 30 > th dose independent rect. 3 5
580 26.88 temperature 30.0 30 < th dose independent rect. 3 5
581 26.88 humidity 50.0 30 > th dose independent rect. 3 5
584 26.88 atmosphere 1015.0 30 < th dose independent rect. 3 5
587 26.88 radiation 10.0 270 < th dose independent rect. 1 9
592 26.88 temperature 10.0 30 > th dose independent rect. 8 19
599 26.88 radiation 40.0 10 < th dose dependent rect. 9 23
610 26.89 atmosphere 1000.0 10 > th dose independent rect. 24 21
657 26.92 precipitation 0.1 270 < th dose independent rect. 3 2
659 26.92 radiation 40.0 30 < th dose independent rect. 3 5
663 26.92 radiation 20.0 90 < th dose independent rect. 3 12
669 26.92 wind 9.0 270 < th dose independent rect. 7 18
675 26.92 precipitation 0.1 270 < th dose dependent rect. 3 2
688 26.92 radiation 20.0 10 < th dose dependent rect. 3 23
703 26.93 precipitation 0.1 270 < th dose independent rect. 15 15
705 26.93 wind 9.0 10 < th dose independent rect. 4 17
708 26.93 wind 9.0 30 < th dose independent rect. 8 19
711 26.93 humidity 50.0 270 > th dose dependent rect. 24 7
714 26.93 temperature 10.0 10 > th dose dependent rect. 8 9
715 26.93 radiation 1.0 90 > th dose dependent rect. 7 10
717 26.93 precipitation 0.1 270 < th dose dependent rect. 15 15
753 26.94 wind 1.0 43200 < th dose dependent rect. 9 2
799 26.96 temperature 10.0 270 > th dose independent rect. 3 2
802 26.96 humidity 50.0 270 > th dose independent rect. 3 2
806 26.96 atmosphere 1010.0 270 < th dose independent rect. 3 2
808 26.96 radiation 20.0 270 < th dose independent rect. 3 2
837 26.96 temperature 10.0 270 > th dose independent rect. 5 22
840 26.96 radiation 30.0 270 < th dose dependent rect. 3 2
859 26.97 radiation 1.0 270 < th dose independent rect. 3 2
875 26.97 radiation 10.0 270 < th dose dependent rect. 3 2
891 26.98 temperature 10.0 43200 > th dose independent rect. 9 8
907 26.98 atmosphere 1000.0 10 > th dose independent rect. 24 23
944 26.99 radiation 40.0 10 < th dose dependent rect. 11 23
959 27.00 radiation 1.0 270 > th dose dependent sin 7 NA
971 27.01 wind 7.0 10 < th dose independent rect. 21 7
976 27.01 wind 1.0 270 > th dose independent rect. 7 18
981 27.01 radiation 20.0 90 < th dose independent rect. 24 23