Os09g0423400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Biopterin transport-related protein BT1 family protein.
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Os09g0423400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Biopterin transport-related protein BT1 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 150.48 | 0.576 | 6.61 | -1.94 | 0.708 | 1.13 | 0.203 | 0.153 | -0.697 | 1.19 | 20.2 | 598 | -- | -- |
| 150.56 | 0.571 | 6.62 | -1.96 | 0.705 | 1.12 | 0.239 | -- | -0.705 | 1.15 | 20.2 | 602 | -- | -- |
| 150.64 | 0.572 | 6.61 | -1.94 | 0.711 | 1.13 | -- | 0.2 | -0.697 | 1.25 | 20.21 | 593 | -- | -- |
| 150.4 | 0.571 | 6.62 | -1.94 | 0.795 | 1.07 | -- | -- | -0.697 | 1.18 | 20.3 | 414 | -- | -- |
| 176.71 | 0.619 | 6.62 | -2.02 | -- | 1.26 | -- | 0.131 | -0.747 | -- | 20.7 | 902 | -- | -- |
| 184.59 | 0.637 | 6.57 | -1.58 | 0.777 | -- | 0.272 | -- | -0.475 | 0.462 | -- | -- | -- | -- |
| 184.9 | 0.637 | 6.57 | -1.59 | 0.776 | -- | -- | -- | -0.477 | 0.541 | -- | -- | -- | -- |
| 176.76 | 0.619 | 6.62 | -2.04 | -- | 1.24 | -- | -- | -0.752 | -- | 20.68 | 881 | -- | -- |
| 240.74 | 0.723 | 6.55 | -- | 0.777 | 0.545 | -- | -- | -0.396 | 0.77 | 20.58 | 365 | -- | -- |
| 222.71 | 0.697 | 6.56 | -1.56 | -- | -- | -- | -- | -0.463 | -- | -- | -- | -- | -- |
| 251.34 | 0.742 | 6.53 | -- | 0.753 | -- | -- | -- | -0.3 | 0.437 | -- | -- | -- | -- |
| 265.18 | 0.758 | 6.56 | -- | -- | 0.648 | -- | -- | -0.485 | -- | 22.3 | 889 | -- | -- |
| 286.95 | 0.791 | 6.52 | -- | -- | -- | -- | -- | -0.29 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 147.93 | temperature | 20 | 720 | > th | dose independent | rect. | 3 | 21 |
| 9 | 149.73 | temperature | 20 | 720 | > th | dose independent | rect. | 17 | 16 |
| 19 | 150.60 | temperature | 20 | 720 | < th | dose independent | rect. | 3 | 21 |
| 21 | 150.73 | temperature | 20 | 720 | > th | dose independent | rect. | 11 | 22 |
| 22 | 150.74 | temperature | 20 | 720 | > th | dose independent | rect. | 17 | 22 |
| 24 | 150.76 | temperature | 20 | 720 | > th | dose independent | rect. | 17 | 20 |
| 31 | 150.94 | temperature | 20 | 720 | > th | dose independent | rect. | 11 | 19 |
| 78 | 151.68 | temperature | 20 | 1440 | > th | dose independent | rect. | 17 | 11 |
| 79 | 151.72 | temperature | 20 | 720 | > th | dose independent | sin | 13 | NA |
| 87 | 151.81 | temperature | 20 | 720 | > th | dose independent | no | NA | NA |
| 88 | 151.81 | temperature | 20 | 720 | > th | dose independent | rect. | 7 | 23 |
| 98 | 151.87 | temperature | 20 | 1440 | > th | dose independent | rect. | 18 | 8 |
| 115 | 152.00 | temperature | 20 | 1440 | > th | dose independent | rect. | 19 | 6 |
| 167 | 152.19 | temperature | 20 | 270 | < th | dose independent | rect. | 23 | 23 |
| 180 | 152.24 | temperature | 20 | 720 | < th | dose independent | rect. | 7 | 23 |
| 206 | 152.33 | temperature | 20 | 720 | < th | dose independent | rect. | 17 | 23 |
| 220 | 152.36 | temperature | 20 | 720 | < th | dose independent | rect. | 13 | 21 |
| 226 | 152.38 | temperature | 20 | 1440 | < th | dose independent | rect. | 17 | 11 |
| 232 | 152.40 | temperature | 20 | 1440 | < th | dose independent | sin | 14 | NA |
| 254 | 152.45 | temperature | 20 | 1440 | < th | dose independent | rect. | 16 | 14 |
| 275 | 152.51 | temperature | 20 | 720 | < th | dose independent | no | NA | NA |
| 288 | 152.55 | temperature | 20 | 1440 | < th | dose independent | rect. | 18 | 17 |
| 295 | 152.57 | temperature | 20 | 1440 | > th | dose independent | rect. | 21 | 1 |
| 326 | 152.63 | temperature | 20 | 1440 | < th | dose independent | rect. | 19 | 7 |
| 512 | 153.09 | temperature | 20 | 1440 | < th | dose independent | rect. | 21 | 1 |
| 569 | 153.23 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 2 |
| 693 | 153.66 | temperature | 15 | 720 | > th | dose dependent | rect. | 18 | 15 |
| 713 | 153.73 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 5 |
| 913 | 154.49 | temperature | 25 | 720 | < th | dose dependent | rect. | 4 | 22 |
| 938 | 154.58 | temperature | 25 | 720 | < th | dose dependent | rect. | 9 | 22 |
| 954 | 154.63 | temperature | 25 | 720 | < th | dose dependent | rect. | 12 | 22 |
| 960 | 154.65 | temperature | 20 | 720 | < th | dose independent | sin | 22 | NA |