BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os07g0242400 Os07g0242400|AK063340
(394 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os07g0242400 Cyclin-like F-box domain containing protein 740 0.0
Os07g0183700 278 5e-75
Os07g0196900 Conserved hypothetical protein 206 2e-53
Os07g0242600 Cyclin-like F-box domain containing protein 177 1e-44
Os07g0195300 Cyclin-like F-box domain containing protein 148 6e-36
Os07g0196300 Cyclin-like F-box domain containing protein 148 8e-36
Os07g0198000 141 1e-33
Os07g0207900 111 7e-25
Os05g0570500 101 1e-21
Os07g0195700 99 7e-21
Os07g0197000 Conserved hypothetical protein 93 4e-19
>Os07g0242400 Cyclin-like F-box domain containing protein
Length = 394
Score = 740 bits (1911), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 357/357 (100%), Positives = 357/357 (100%)
Query: 38 AKPICRLRAVCRSWLSFTTDRLFLAAYAAVHPHPLLAVLVDSFPSRCCVDLVDLSGNVVE 97
AKPICRLRAVCRSWLSFTTDRLFLAAYAAVHPHPLLAVLVDSFPSRCCVDLVDLSGNVVE
Sbjct: 38 AKPICRLRAVCRSWLSFTTDRLFLAAYAAVHPHPLLAVLVDSFPSRCCVDLVDLSGNVVE 97
Query: 98 EILGVGGECRVLTASYDRVLVAGEHHRVSVLDPATGSVSALPFGIAEDMVRRNGMRPAWF 157
EILGVGGECRVLTASYDRVLVAGEHHRVSVLDPATGSVSALPFGIAEDMVRRNGMRPAWF
Sbjct: 98 EILGVGGECRVLTASYDRVLVAGEHHRVSVLDPATGSVSALPFGIAEDMVRRNGMRPAWF 157
Query: 158 AFGQTNSTGEYKLLRILEDLEDGYEADPVCEVFAIGDMNGRWRKMESPPGYLDPSCTNGV 217
AFGQTNSTGEYKLLRILEDLEDGYEADPVCEVFAIGDMNGRWRKMESPPGYLDPSCTNGV
Sbjct: 158 AFGQTNSTGEYKLLRILEDLEDGYEADPVCEVFAIGDMNGRWRKMESPPGYLDPSCTNGV 217
Query: 218 VFEGAAYFFLDHWQMDPSYYFATGCIPSFDLATEQWSTALQGPVNRILEEANGTLNYADL 277
VFEGAAYFFLDHWQMDPSYYFATGCIPSFDLATEQWSTALQGPVNRILEEANGTLNYADL
Sbjct: 218 VFEGAAYFFLDHWQMDPSYYFATGCIPSFDLATEQWSTALQGPVNRILEEANGTLNYADL 277
Query: 278 TDRLMLAQLEGTLCTAHFNDQISAVDLWFLVDFENGMWSKEYRINVEFAFDGFGDGVQPL 337
TDRLMLAQLEGTLCTAHFNDQISAVDLWFLVDFENGMWSKEYRINVEFAFDGFGDGVQPL
Sbjct: 278 TDRLMLAQLEGTLCTAHFNDQISAVDLWFLVDFENGMWSKEYRINVEFAFDGFGDGVQPL 337
Query: 338 LVTDEGNVVLWVQIGSKGMVWIYNPVTNTSSEIVQTKASIFTGVGVYTGNQLCPQSM 394
LVTDEGNVVLWVQIGSKGMVWIYNPVTNTSSEIVQTKASIFTGVGVYTGNQLCPQSM
Sbjct: 338 LVTDEGNVVLWVQIGSKGMVWIYNPVTNTSSEIVQTKASIFTGVGVYTGNQLCPQSM 394
>Os07g0183700
Length = 361
Score = 278 bits (711), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 174/360 (48%), Positives = 213/360 (59%), Gaps = 63/360 (17%)
Query: 38 AKPICRLRAVCRSWLSFTTDRLFLAAYAAVHPHP--LLAVLVDSFPSRCCVDLVDLSGNV 95
AKPICRLRAVC SW SFT+D LF AA+AA HPH LLAV V++ P+ ++LVDLSGNV
Sbjct: 54 AKPICRLRAVCHSWRSFTSDPLFAAAHAARHPHTALLLAVGVETSPTPR-INLVDLSGNV 112
Query: 96 VEEILGVGGECRVLTASYDRVLVAGEHHRVSVLDPATGSVSALPFGIAEDMVRRNGMRPA 155
V+ I C L + + V G
Sbjct: 113 VKHI---PCGCTYLAVAPEAETVFGSR--------------------------------- 136
Query: 156 WFAFGQTNSTGEYKLLRILEDLEDGYEADPVCEVFAIGDMNGRWRKMESPPGYLDPSCTN 215
E+KLLRI+E + + V E+ D +WRK ++PP YLD S TN
Sbjct: 137 -----------EHKLLRIVESRDYSH----VSEIITTSDTKPQWRKADNPPDYLDWSFTN 181
Query: 216 GVVFEGAAYFFLDHW-QMDPSYYFATGCIPSFDLATEQWSTALQGPVNRILEEANGTLNY 274
GVV+ GAAYF L ++ ++ S TGC+PSFDL TEQWS LQGP IL +ANGT+NY
Sbjct: 182 GVVYRGAAYFLLSYFNRVAASSLIRTGCMPSFDLETEQWSMTLQGPTKTILHDANGTVNY 241
Query: 275 ADLTDRLMLAQLEGTLCTAHFNDQISAVDLWFLVDFENGMWSKEYRINVEFAFDGFGDG- 333
L LMLAQL+GTL AH+ D +S VDLWFL DF+ G WSKEYRINV+F F FG G
Sbjct: 242 TGLAGHLMLAQLKGTLSAAHWKDHVSIVDLWFLTDFDKGTWSKEYRINVDFVF--FGTGV 299
Query: 334 ---VQPLLVTDEGNVVLWVQIGSKGMVWIYNPVTNTSSEIVQTKASIFTGVGVYTGNQLC 390
V PL+VTDEG VV W+Q G+K +V IYNPVT S +I +T SI+ GVGVYTG+ LC
Sbjct: 300 YVKVHPLVVTDEGEVVFWLQAGTKAIVQIYNPVTKISLDITET--SIYAGVGVYTGSPLC 357
>Os07g0196900 Conserved hypothetical protein
Length = 152
Score = 206 bits (525), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 100/154 (64%), Positives = 126/154 (81%), Gaps = 4/154 (2%)
Query: 243 IPSFDLATEQWSTALQGPVNRILEEANGTLNYADLTDRLMLAQLEGTLCTAHFNDQISAV 302
+PSFD ATE+WS ALQGP+NRILEE+NGTL+Y DL ++LML+ L+GTLCT+H+NDQ V
Sbjct: 1 MPSFDFATEKWSVALQGPLNRILEESNGTLSYHDLANQLMLSGLKGTLCTSHWNDQFYTV 60
Query: 303 DLWFLVDFENGMWSKEYRINVEFAFDGFGD--GVQPLLVTDEGNVVLWVQIGSKGMVWIY 360
DLWFL D E G WSK++RINV+ F G GD VQPLLVTDEG +VL +Q+GSKG+V IY
Sbjct: 61 DLWFLTDSEKGTWSKDHRINVDAVFHGIGDYLKVQPLLVTDEGKIVLSMQMGSKGVVQIY 120
Query: 361 NPVTNTSSEIVQTKASIFTGVGVYTGNQLCPQSM 394
+PVT+TSS+I+Q SI+TG V+TG+ LCPQS+
Sbjct: 121 DPVTDTSSDIIQ--ISIYTGASVFTGSLLCPQSV 152
>Os07g0242600 Cyclin-like F-box domain containing protein
Length = 397
Score = 177 bits (449), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 127/368 (34%), Positives = 188/368 (51%), Gaps = 27/368 (7%)
Query: 38 AKPICRLRAVCRSWLSFTTDRLFLAAYAAVHPHP-LLAVLVDSFPSRCCVDLVDLSGNVV 96
AK +CRLR VCR W S T+D LF+ + A H LA D + ++D +GNV+
Sbjct: 39 AKELCRLRIVCRPWRSLTSDPLFMKTHVAHHRETFFLASFKD---DETHIHIMDFAGNVI 95
Query: 97 EEILGVGGECRVLTASYDRVLVAGEHHRVSVLDPATGSVSALPFGIAEDMVRRNGMRPAW 156
++I G+ +VL D V VA + VL+P TG V LP AE+ +R +
Sbjct: 96 KQI-GIPAGHKVLCTRLDLVCVATNKNSCHVLNPVTGDVYNLPKSPAEEHTYHVNLRKPF 154
Query: 157 --FAFGQTNSTGEYKLLRILEDLEDGYE---ADPVCEVFAI--GDMNGRWRKMESPPGYL 209
FAFG STGEYK+LR+ G+ +CEV + G RWR +S ++
Sbjct: 155 TSFAFGHVASTGEYKVLRMFN--RPGFTDLGIPQLCEVITVKGGTGQARWRGKQSREFFV 212
Query: 210 DPSCTNGVVFEGAAYFFLDHWQMDPSYYFATGC------IPSFDLATEQWSTALQGPVNR 263
+ N V +FL D G I SFDL E+W +QGP++R
Sbjct: 213 ECQKANSGVVVNGVVYFLIDSVYDSMIIGGDGAGIHPDFICSFDLEVEEWREDIQGPISR 272
Query: 264 -ILEEANGTLNYADLTDRLMLAQLEGTLCTA-HFNDQISAVDLWFLVDFENGMWSKEYRI 321
+ + + Y + D+L LA+L+G L H + + S +DLW+L+D+E W K+Y I
Sbjct: 273 NFVYDMDFPDEYIAIWDQLSLAELKGYLVLVYHQSYRSSTIDLWYLIDYETRTWIKQYSI 332
Query: 322 NVEFAFDGFGDGVQPLLVTDEGNVVLWVQIGSKGMVWIYNPVTNTSSEIVQTKASIFTGV 381
+E V+PLLV D+G +V+W +GS G++ IY+P T+T +E+ + S V
Sbjct: 333 QIESFVPVRECKVKPLLVLDDGRIVVW--LGSTGLLLIYDPRTSTFAEVEMRRLS---EV 387
Query: 382 GVYTGNQL 389
G+YTG+ L
Sbjct: 388 GLYTGSVL 395
>Os07g0195300 Cyclin-like F-box domain containing protein
Length = 432
Score = 148 bits (374), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 114/375 (30%), Positives = 185/375 (49%), Gaps = 61/375 (16%)
Query: 39 KPICRLRAVCRSWLSFTTDRLFLAAYAAVHPHPLLA---VLVDSFPSRCCVDLVDLSGNV 95
K +CRLR VCRSW + TTD F+AA+AA H PLLA + D FPS V L+DLSG+V
Sbjct: 48 KDVCRLRGVCRSWRALTTDATFVAAHAARHRGPLLAGGVLDFDVFPS-VDVLLMDLSGSV 106
Query: 96 VEEILGVGGECRVLTASYDRVLVAGEHH-RVSVLDPATGSVSALPFGIAEDMVRRNGMRP 154
V+ I + T + D + V + R ++L+P TG+ LP ++ R
Sbjct: 107 VKRIRHAATHLVLPTTNLDLLCVTEVYTCRATLLNPITGAAVHLPEPLSTPHSLRGRSLS 166
Query: 155 AW---FAFGQTNSTGEYKLLRILEDLEDGYEADPVCEVFAIGD---MNGRWRKMESPPGY 208
+ F +G+ +S G+YK+LR+L D + + + E+ ++ + + RWR ++ P
Sbjct: 167 DFDGSFKYGR-DSNGDYKVLRVLTDCHNKQFPEQLFEILSLDESSRYHMRWRAKKALPMC 225
Query: 209 LDPSCTNGVVFEGAAYFFLD------------HWQMDPSYYFATGCIPSFDLATEQWSTA 256
+ GVV G YF LD ++MD + FDL +E+W +
Sbjct: 226 VRRDAIGGVVINGVVYFLLDGRPNGVKNAHRESYEMDH--------MALFDLCSERWISY 277
Query: 257 LQGP---------VNRILEEANGTLNYADLTDRLMLAQLEGTLCTAHFNDQISA-----V 302
L+GP ++ IL E Y +L+ L++L G L A + D SA V
Sbjct: 278 LEGPMATHPEMNNIDEILPEPLEMSVYQNLS----LSELSGALVVAQYTDYRSAEIKSYV 333
Query: 303 DLWFLVDFENGMWSKEYRINVEF---AFDGFGDGVQPLLVTDEGNVVLWVQIG------- 352
DLW+L+D E +W K+YRI +E + P L+ D+G +++++ +
Sbjct: 334 DLWYLMDSEKQIWEKKYRIVLEMDTWDTEHIFPHAHPSLILDDGRILIYITVHLANFEGQ 393
Query: 353 -SKGMVWIYNPVTNT 366
++ ++ +Y+P T+T
Sbjct: 394 YTRRVMRLYDPETDT 408
>Os07g0196300 Cyclin-like F-box domain containing protein
Length = 404
Score = 148 bits (373), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 125/379 (32%), Positives = 188/379 (49%), Gaps = 46/379 (12%)
Query: 38 AKPICRLRAVCRSWLSFTTDRLFLAAYAAVHPHPLLAVLV-------DSFPSRCCVDLVD 90
A+ +CRLRAVCRSW + +DR F+ A+A+ HP P +A D S VD+VD
Sbjct: 38 ARDVCRLRAVCRSWRAVASDRAFVDAHASRHPGPYVAACFSDEADGGDGDESCGGVDIVD 97
Query: 91 L-SGNVVEEILGVGGECRVLTASYDRV-LVAGEHH-RVSVLDPATGSVSALPFGIA---E 144
L SG++V+ I RV D V LV G V+VLDP TG+ I+ +
Sbjct: 98 LSSGDIVKTIYTEVSGSRVQRTRLDLVCLVEGPSPLDVTVLDPVTGATYIPAKSISADNK 157
Query: 145 DMVRRNGMRPAWFAFGQTNSTGEYKLLRILEDLE--DGYEADPVCEVFAIGDMNG-RWRK 201
D++ + AFG+ STGEYK++R+L + YE CE+ + +WR
Sbjct: 158 DLLSSGRLIMESCAFGKVPSTGEYKVVRLLGSGNPCELYE----CEIMTVNSAGALQWRA 213
Query: 202 MESPPGYLDPSCTN----GVVFEGAAYFFLDHWQM---DPSYYFATGCIPSFDLATEQWS 254
++ P P C++ VV G AYF LD+ ++ + G I FDL TE+W
Sbjct: 214 IQGPQL---PVCSSNNMRSVVINGVAYFLLDYSRLYCSNDGLLIRPGNIVPFDLETEEWM 270
Query: 255 TALQGPV----NRILEEANGTLNYADLTDRLMLAQLEGTLCTAHFNDQISAVDLWFLVDF 310
L GP R + + TL ++ + L LA L G+L H S +DLWFL D
Sbjct: 271 GILNGPKPVARGRDMIVISSTL---EIMEPLSLADLNGSLVMVHAV-YGSPMDLWFLSDL 326
Query: 311 ENGMWSKEYRINVEFAFDGFGDGVQPLLVTDEGNVVLWVQIGSKGMVWIYNPVTNTSSEI 370
E G+W K+Y I+ E+ + + PLL+ D+ +V ++ ++ Y+ +T ++I
Sbjct: 327 EQGLWVKKYSIDFEY----YNNNAYPLLLLDDEKIVFLLR--GTNVLQSYDLKDDTYTDI 380
Query: 371 VQTKASIFTGVGVYTGNQL 389
+ F VG+YTG+ L
Sbjct: 381 LVVPD--FRSVGIYTGDLL 397
>Os07g0198000
Length = 420
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 120/353 (33%), Positives = 161/353 (45%), Gaps = 43/353 (12%)
Query: 38 AKPICRLRAVCRSWLSFTTDRLFLAAYAAVHPHPLLAVLVDSFPSRCC---VDLVDLSGN 94
AK R RAVCR W + +D F+AA+AA L+A SR VDLV L+G+
Sbjct: 46 AKAAARFRAVCRPWRATLSDPRFVAAHAARRGALLVATGAPCRTSRGSGGHVDLVGLAGD 105
Query: 95 VVEEILGVGGECRVLTASYDRVLVAGEHHRVSVLDPATGSVSALPFGIAEDMVRRNGMRP 154
VV G + T D V G R VL P TG+ + P + D+ N
Sbjct: 106 VVRRTRAEEGVLELSTCG-DLACVVGTDRRARVLHPVTGAGADDP--LPHDLAEENKPWA 162
Query: 155 AW----------FAFGQTNSTGEYKLLRILEDLEDGYEADPVCEVFAI-----GDMNGRW 199
W AFG+ +STGEYK+LR+ L + + EV A+ RW
Sbjct: 163 GWRLEERFHAFTHAFGRASSTGEYKVLRV-ASLSPDLRVEQLVEVLALDRAGRAHAGARW 221
Query: 200 RKMESPPGYLDPSCTNGV-VFEGAAYF--------FLDHWQMDPSYYFATGCIPSFDLAT 250
R M PP +L + G+ V G +F FL D + G I FDL T
Sbjct: 222 RGMPRPPFHLAGASNAGMAVVAGVVHFLAVDIPLPFLPFEHDDDDIHH--GAIARFDLDT 279
Query: 251 EQWSTALQGPVNRILEEANGTLNYADLTDRLMLAQLEGTLCTAHFN--DQISAVDLWFLV 308
EQW L+GP+N + + L+ LT L +L+G L T H + Q S++DLWFL+
Sbjct: 280 EQWRPLLRGPLNIHQIQQDNDLSPPLLT----LTELKGFLVTVHRDRSHQSSSMDLWFLI 335
Query: 309 DFENGMWSKEYRINVEFAFDGFGDGVQPLLVTDEGNVVLWVQIGSKGMVWIYN 361
D E W KEY+I + F PLLV DE +V V+ KG V +Y+
Sbjct: 336 DSEEETWVKEYKIQIHLRPREF--YAHPLLVLDERMIVFCVR--PKGRVMVYD 384
>Os07g0207900
Length = 403
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 117/381 (30%), Positives = 176/381 (46%), Gaps = 57/381 (14%)
Query: 38 AKPICRLRAVCRSWLSFTTDRLFLAAYAAVHPHPLLAVLVDSFPSRCCVDLVDL-----S 92
A+P CRLRAVCR W + +D F AA+AA HP P L V ++LVD+ S
Sbjct: 46 ARPACRLRAVCRPWRAVLSDPRFAAAHAARHPDPHLVVAACDRLDAGGIELVDVYLVGAS 105
Query: 93 GNVVEEILGVGGECRVLTASYDR----VLVAGEHHRVSVLDPATGSVSALPFGIAEDMVR 148
G+V + + G C S R +LV + + A+ +VS +P G +
Sbjct: 106 GDVAKRV--PAGRCDTDAVSSARDGVALLVGNDRRLRVLDAAASAAVSLVPDGEHHPIN- 162
Query: 149 RNGMRPAWFAFGQ-TNSTGEYKLLRILEDLEDGYEADPVCEVFAIG-----DMNGRWRKM 202
F G+ +S+GE+K+LRI + + VC V + N RWR+
Sbjct: 163 ------CSFTLGRAASSSGEHKVLRIGTVVHGEPQ---VCAVLTLAVAGGRGQNARWREA 213
Query: 203 ESPPGYLDPSCTNGVVFEGAAYFFLDHWQMDPSYYFATGCIPSFDLATEQWSTALQG--P 260
SPP + + V G AYF L Y A I +FDL EQW AL G P
Sbjct: 214 PSPPLVVRTRRGDVAVAGGVAYFLLRR------AYLADR-IAAFDLEAEQWRPALVGGPP 266
Query: 261 VNRILEEANGTLNYADLTDRLMLAQLEGTLCTAHFNDQISAVDLWFLVDFENG--MWSKE 318
+ A D R+ LA+L G+L A + + + +DLWFL+ +G WSK+
Sbjct: 267 L------AAWRPTRPD-RPRVTLAELGGSLVVAIDDHRAATLDLWFLLAAGDGEQHWSKQ 319
Query: 319 YRINVEFAFDGF---GDGVQPLLVTDEGNVVLWV-------QIGSKGMVWIYNPVTNTSS 368
Y + + + + G+ +P++V D+G +V WV G++ +Y+P+T +
Sbjct: 320 YTVTMPYHRRPWRCDGERAEPVVVLDDGRIVFWVWAGGSGGTRHGGGVMRVYDPITGGHT 379
Query: 369 EIVQTKASIFTGVGVYTGNQL 389
++ A+ VGVYTGN L
Sbjct: 380 DV--ATAARCAHVGVYTGNLL 398
>Os05g0570500
Length = 274
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/289 (31%), Positives = 136/289 (47%), Gaps = 46/289 (15%)
Query: 125 VSVLDPATGSVSALPFGIAEDMVRRNGMRPAWFAFG--QTNSTGEYKLLRILEDLEDGYE 182
+ VLDPA+G+ +P + P ++F +T STG+YK+LRI D+
Sbjct: 11 LRVLDPASGAAPLVP---------DYEVHPINYSFTLVRTASTGDYKVLRITHDVALQPR 61
Query: 183 ADPVCEVFAIG--DMNGRW--RKMESPPGYLDPSCTNGVVFEGAAYFFLDHWQMDPSYYF 238
VC V A+G +NG R+++SPPG + V +G AYF L D
Sbjct: 62 ERQVCSVLALGGDGVNGGRLAREVQSPPGNVKTWDKYVAVVDGVAYFVL----RDEFLLS 117
Query: 239 ATGC---IPSFDLATEQWSTALQGPVNRILEEANGTLNYADLTDRLMLAQLEGTLCTAHF 295
TG I +FD+ EQW L G G R+ LA L G+L A
Sbjct: 118 ETGGGDWITAFDVEAEQWRPELVG----------GPPETFHNRLRVSLAALRGSLVVAQD 167
Query: 296 NDQISAVDLWFLVDFENGM-----WSKEYRINVEFAFDGF---GDGVQPLLVTDEGNVVL 347
+ Q +DLWFL+ + G WSK Y + + + F G+ +P++V D+G +V
Sbjct: 168 DHQAGTLDLWFLLAGDGGKVGPQHWSKLYTVTMPYHGRPFRLDGERAEPVVVLDDGRIVF 227
Query: 348 WV---QIGSKGMVW-IYNPVTNTSSEIVQTKASIFTGVGVYTGNQLCPQ 392
WV ++ S+G V +Y+P T +++ + VGVYTG+ L P+
Sbjct: 228 WVWERRVSSRGGVMRVYDPNTGGQTDVAAEANCVH--VGVYTGSLLRPR 274
>Os07g0195700
Length = 294
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 72/224 (32%), Positives = 108/224 (48%), Gaps = 19/224 (8%)
Query: 182 EADPVCEVFAI----GDMNGRWRKMESPPGYLDPSCTNGVVFEGAAYFFLDHWQMDPSYY 237
E +CEVF + G + WR +S +++ N V +FL D
Sbjct: 11 ELPQLCEVFTVKGGTGQGHAHWRGKQSRQFFVEMQKANSGVVVNGVVYFLMDALYDAMII 70
Query: 238 FATGC------IPSFDLATEQWSTALQGPVNR--ILEEANGTLNYADLTDRLMLAQLEGT 289
G I SFDL TE+W +QGP++ + + Y + +L LA+L+G
Sbjct: 71 SGLGAGIHPDFIFSFDLETEEWREDIQGPISSSFVFDGDFDPQEYFSIWHQLCLAELKGY 130
Query: 290 LCTAHFNDQISAVDLWFLVDFENGMWSKEYRINVEFAFDGFGDGVQPLLVTDEGNVVLWV 349
L H S +DLWFL D+E W KEY I E V+PLLV D+G +++W
Sbjct: 131 L--VHHQRFCSTMDLWFLTDYETRAWVKEYSIQTESFIPVLEYDVKPLLVLDDGRILIW- 187
Query: 350 QIGSKGMVWIYNPVTNTSSEIVQTKASIFTGVGVYTGNQLCPQS 393
+GS G++ IY+P T++ +E+ K VG+YTG+ L Q+
Sbjct: 188 -LGSTGLLLIYDPRTSSFAEV---KMRHLAEVGMYTGSLLSLQN 227
>Os07g0197000 Conserved hypothetical protein
Length = 381
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 79/227 (34%), Positives = 114/227 (50%), Gaps = 34/227 (14%)
Query: 127 VLDPATGSVSALPFGIAEDMVRRNGM-----RPAWFAFGQTNSTGEYKLLRILEDLEDGY 181
VL+PATG ALP ++++ GM + AFG+ +STG YK LRI+ +
Sbjct: 9 VLNPATGVTVALPKNHSDEIAAGRGMMMYHGKVESHAFGEISSTGVYKALRIIR-----F 63
Query: 182 EADPVCEVFAI-GDMNGRWRKMESPPGYLDPSCTNG---VVFEGAAYFFLDHWQMDPSYY 237
+CEV A+ G+ WRKM+ PP + C+ VV +G YF ++ + + Y
Sbjct: 64 YQRQLCEVIAVDGNNQDMWRKMQGPPATI--CCSKQMRCVVVDGVVYFMMEFY----TTY 117
Query: 238 FAT-------GCIPSFDLATEQWSTALQGP--VNRILEEANGTLNYADLTDRLMLAQLEG 288
F G I SF+L TE+W T +QGP V+R +++ + T Y++L +L LA G
Sbjct: 118 FEIVVLPVEPGSIASFNLETEKWMT-VQGPEVVHRHVQDGDST--YSELNLQLSLADSGG 174
Query: 289 TLCTAHFNDQISAVDLWFLVDFENGMWSKEYR-INVEFAFDGFGDGV 334
L T H I +DLWFL D E R +N EF + G G
Sbjct: 175 CLVTVHNIPPIR-MDLWFLTDSETDDGRVYTRSVNKEFRSEDPGTGT 220
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.322 0.138 0.440
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 13,595,149
Number of extensions: 591471
Number of successful extensions: 1413
Number of sequences better than 1.0e-10: 11
Number of HSP's gapped: 1373
Number of HSP's successfully gapped: 13
Length of query: 394
Length of database: 17,035,801
Length adjustment: 103
Effective length of query: 291
Effective length of database: 11,657,759
Effective search space: 3392407869
Effective search space used: 3392407869
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 157 (65.1 bits)